RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 TCERG1O14776 1098 aaKnown RBP13.43□□□□□ -0.26
HDLBP-213ENST00000427007 NTSR2O95665 410 aa13.43□□□□□ -0.26
HDLBP-213ENST00000427007 RIC1Q4ADV7 1423 aa13.43□□□□□ -0.26
HDLBP-213ENST00000427007 GIGYF2Q6Y7W6 1299 aaKnown RBP13.43□□□□□ -0.26
HDLBP-213ENST00000427007 LDHDQ86WU2 507 aa13.43□□□□□ -0.26
HDLBP-213ENST00000427007 NECTIN2Q92692 538 aa13.43□□□□□ -0.26
HDLBP-213ENST00000427007 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
HDLBP-213ENST00000427007 PCNTO95613 3336 aa13.43□□□□□ -0.26
HDLBP-213ENST00000427007 ADAMTSL1Q8N6G6 1762 aa13.43□□□□□ -0.26
HDLBP-213ENST00000427007 FZD9O00144 591 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 TMPOP42166 694 aaKnown RBP13.42□□□□□ -0.26
HDLBP-213ENST00000427007 PDIA6Q15084 440 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 RALBP1Q15311 655 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 NEUROD2Q15784 382 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 PROSER3Q2NL68 480 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 C3orf67Q6ZVT6 689 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 LRP10Q7Z4F1 713 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 PPP1R42Q7Z4L9 355 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 CCDC146Q8IYE0 955 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 PSMD1Q99460 953 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 HACL1Q9UJ83 578 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 CLEC11AQ9Y240 323 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 LAMB2P55268 1798 aa13.42□□□□□ -0.26
HDLBP-213ENST00000427007 PASKQ96RG2 1323 aa13.41□□□□□ -0.26
HDLBP-213ENST00000427007 PPEF1O14829 653 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-213ENST00000427007 EPHX2P34913 555 aa13.41□□□□□ -0.26
HDLBP-213ENST00000427007 JDP2Q8WYK2 163 aa13.41□□□□□ -0.26
HDLBP-213ENST00000427007 RBM17Q96I25 401 aaKnown RBP13.41□□□□□ -0.26
HDLBP-213ENST00000427007 LTBP1Q14766 1721 aa13.4□□□□□ -0.26
HDLBP-213ENST00000427007 HOXA10P31260 410 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-213ENST00000427007 LMOD3Q0VAK6 560 aa13.4□□□□□ -0.26
HDLBP-213ENST00000427007 AIMP1Q12904 312 aaKnown RBP13.4□□□□□ -0.26
HDLBP-213ENST00000427007 DDX10Q13206 875 aaKnown RBP13.4□□□□□ -0.26
HDLBP-213ENST00000427007 PARP10Q53GL7 1025 aa13.4□□□□□ -0.26
HDLBP-213ENST00000427007 CC2D2BQ6DHV5 1058 aa13.4□□□□□ -0.26
HDLBP-213ENST00000427007 GPC2Q8N158 579 aa13.4□□□□□ -0.26
HDLBP-213ENST00000427007 GJA3Q9Y6H8 435 aa13.4□□□□□ -0.26
HDLBP-213ENST00000427007 CAPN15O75808 1086 aa13.39□□□□□ -0.27
HDLBP-213ENST00000427007 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
HDLBP-213ENST00000427007 KRT24Q2M2I5 525 aa13.39□□□□□ -0.27
HDLBP-213ENST00000427007 TNS4Q8IZW8 715 aa13.39□□□□□ -0.27
HDLBP-213ENST00000427007 LARGE2Q8N3Y3 721 aa13.39□□□□□ -0.27
HDLBP-213ENST00000427007 NLRP3Q96P20 1036 aa13.39□□□□□ -0.27
HDLBP-213ENST00000427007 CRAMP1Q96RY5 1269 aa13.39□□□□□ -0.27
HDLBP-213ENST00000427007 UTP14AQ9BVJ6 771 aaKnown RBP13.39□□□□□ -0.27
HDLBP-213ENST00000427007 LAS1LQ9Y4W2 734 aaKnown RBP13.39□□□□□ -0.27
HDLBP-213ENST00000427007 MYBBP1AQ9BQG0 1328 aaKnown RBP13.39□□□□□ -0.27
HDLBP-213ENST00000427007 CNTNAP1P78357 1384 aa13.38□□□□□ -0.27
HDLBP-213ENST00000427007 ITGBL1O95965 494 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-213ENST00000427007 MAP1SQ66K74 1059 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-213ENST00000427007 COPS6Q7L5N1 327 aa13.38□□□□□ -0.27
HDLBP-213ENST00000427007 XAGE3Q8WTP9 111 aa13.38□□□□□ -0.27
HDLBP-213ENST00000427007 ZNF428Q96B54 188 aa13.38□□□□□ -0.27
HDLBP-213ENST00000427007 BABAM1Q9NWV8 329 aa13.38□□□□□ -0.27
HDLBP-213ENST00000427007 TMEM88BA6NKF7 163 aa13.37□□□□□ -0.27
HDLBP-213ENST00000427007 PNMA8AQ86V59 439 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-213ENST00000427007 ABCC4O15439 1325 aa13.37□□□□□ -0.27
HDLBP-213ENST00000427007 TAF1P21675 1872 aa13.36□□□□□ -0.27
HDLBP-213ENST00000427007 PPIP5K2O43314 1243 aa13.36□□□□□ -0.27
HDLBP-213ENST00000427007 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-213ENST00000427007 LMOD1P29536 600 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-213ENST00000427007 WDR43Q15061 677 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDLBP-213ENST00000427007 AOC3Q16853 763 aa13.36□□□□□ -0.27
HDLBP-213ENST00000427007 GRIPAP1Q4V328 841 aa13.36□□□□□ -0.27
HDLBP-213ENST00000427007 SLC10A5Q5PT55 438 aa13.36□□□□□ -0.27
HDLBP-213ENST00000427007 NLRP10Q86W26 655 aa13.36□□□□□ -0.27
HDLBP-213ENST00000427007 CNTROBQ8N137 903 aa13.36□□□□□ -0.27
HDLBP-213ENST00000427007 TMX4Q9H1E5 349 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-213ENST00000427007 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
HDLBP-213ENST00000427007 CHL1O00533 1208 aa13.35□□□□□ -0.27
HDLBP-213ENST00000427007 SCNN1DP51172 638 aa13.35□□□□□ -0.27
HDLBP-213ENST00000427007 HSP90AB3PQ58FF7 597 aa13.35□□□□□ -0.27
HDLBP-213ENST00000427007 NIM1KQ8IY84 436 aa13.35□□□□□ -0.27
HDLBP-213ENST00000427007 RUNDC1Q96C34 613 aa13.35□□□□□ -0.27
HDLBP-213ENST00000427007 DDX21Q9NR30 783 aaKnown RBP eCLIP13.35□□□□□ -0.27
HDLBP-213ENST00000427007 CHPF2Q9P2E5 772 aa13.35□□□□□ -0.27
HDLBP-213ENST00000427007 ATP6V0A2Q9Y487 856 aa13.35□□□□□ -0.27
HDLBP-213ENST00000427007 DDX60Q8IY21 1712 aaKnown RBP13.35□□□□□ -0.27
HDLBP-213ENST00000427007 EPS15P42566 896 aa13.34□□□□□ -0.27
HDLBP-213ENST00000427007 VEGFBP49765 207 aa13.34□□□□□ -0.27
HDLBP-213ENST00000427007 TCIRG1Q13488 830 aa13.34□□□□□ -0.27
HDLBP-213ENST00000427007 TRMT112Q9UI30 125 aaKnown RBP13.34□□□□□ -0.27
HDLBP-213ENST00000427007 ADAMTS8Q9UP79 889 aa13.34□□□□□ -0.27
HDLBP-213ENST00000427007 FOXN1O15353 648 aa13.33□□□□□ -0.28
HDLBP-213ENST00000427007 FMR1Q06787 632 aaKnown RBP eCLIP13.33□□□□□ -0.281e-8■■■■□ 19.7
HDLBP-213ENST00000427007 HDGFL1Q5TGJ6 251 aa13.33□□□□□ -0.28
HDLBP-213ENST00000427007 SH3TC1Q8TE82 1336 aa13.33□□□□□ -0.28
HDLBP-213ENST00000427007 DPP8Q6V1X1 898 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-213ENST00000427007 DDX46Q7L014 1031 aaKnown RBP13.32□□□□□ -0.28
HDLBP-213ENST00000427007 SUPT20HQ8NEM7 779 aa13.32□□□□□ -0.28
HDLBP-213ENST00000427007 ABT1Q9ULW3 272 aaKnown RBP13.32□□□□□ -0.28
HDLBP-213ENST00000427007 LRRC37AA6NMS7 1700 aa13.31□□□□□ -0.28
HDLBP-213ENST00000427007 BBOX1O75936 387 aa13.31□□□□□ -0.28
HDLBP-213ENST00000427007 GRAPQ13588 217 aa13.31□□□□□ -0.28
HDLBP-213ENST00000427007 DEFB115Q30KQ5 88 aa13.31□□□□□ -0.28
HDLBP-213ENST00000427007 SP8Q8IXZ3 490 aa13.31□□□□□ -0.28
HDLBP-213ENST00000427007 MPNDQ8N594 471 aa13.31□□□□□ -0.28
HDLBP-213ENST00000427007 GRAPLQ8TC17 118 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-213ENST00000427007 RTFDC1Q9BY42 306 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-213ENST00000427007 DUOX1Q9NRD9 1551 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms