RNA–Protein interactions for RNA: ENST00000421231.5

HDAC7-206, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-206ENST00000421231 C3orf67Q6ZVT6 689 aa20.52■□□□□ 0.88
HDAC7-206ENST00000421231 PSMD1Q99460 953 aa20.52■□□□□ 0.88
HDAC7-206ENST00000421231 TAF1DQ9H5J8 278 aaPredicted RBP20.52■□□□□ 0.88
HDAC7-206ENST00000421231 COL4A5P29400 1685 aa20.51■□□□□ 0.87
HDAC7-206ENST00000421231 IQCA1LA6NCM1 817 aa20.51■□□□□ 0.87
HDAC7-206ENST00000421231 FZD9O00144 591 aa20.51■□□□□ 0.87
HDAC7-206ENST00000421231 PARP10Q53GL7 1025 aa20.51■□□□□ 0.87
HDAC7-206ENST00000421231 CC2D2BQ6DHV5 1058 aa20.51■□□□□ 0.87
HDAC7-206ENST00000421231 CCDC146Q8IYE0 955 aa20.51■□□□□ 0.87
HDAC7-206ENST00000421231 CRAMP1Q96RY5 1269 aa20.51■□□□□ 0.87
HDAC7-206ENST00000421231 TRIM35Q9UPQ4 493 aa20.51■□□□□ 0.87
HDAC7-206ENST00000421231 ANKRD36CQ5JPF3 1778 aa20.51■□□□□ 0.87
HDAC7-206ENST00000421231 CHL1O00533 1208 aa20.5■□□□□ 0.87
HDAC7-206ENST00000421231 SLC51AQ86UW1 340 aa20.5■□□□□ 0.87
HDAC7-206ENST00000421231 RPGRQ92834 1020 aaKnown RBP20.5■□□□□ 0.87
HDAC7-206ENST00000421231 ADAMTSL1Q8N6G6 1762 aa20.49■□□□□ 0.87
HDAC7-206ENST00000421231 KRT24Q2M2I5 525 aa20.49■□□□□ 0.87
HDAC7-206ENST00000421231 SLC10A5Q5PT55 438 aa20.49■□□□□ 0.87
HDAC7-206ENST00000421231 PPP1R42Q7Z4L9 355 aa20.49■□□□□ 0.87
HDAC7-206ENST00000421231 NEUROD2Q15784 382 aa20.48■□□□□ 0.87
HDAC7-206ENST00000421231 LDHDQ86WU2 507 aa20.48■□□□□ 0.87
HDAC7-206ENST00000421231 RUNDC1Q96C34 613 aa20.48■□□□□ 0.87
HDAC7-206ENST00000421231 PASKQ96RG2 1323 aa20.48■□□□□ 0.87
HDAC7-206ENST00000421231 COPS6Q7L5N1 327 aa20.47■□□□□ 0.87
HDAC7-206ENST00000421231 RBM17Q96I25 401 aaKnown RBP20.47■□□□□ 0.87
HDAC7-206ENST00000421231 UTP14AQ9BVJ6 771 aaKnown RBP20.47■□□□□ 0.87
HDAC7-206ENST00000421231 ADAMTS8Q9UP79 889 aa20.47■□□□□ 0.87
HDAC7-206ENST00000421231 LAMB2P55268 1798 aa20.46■□□□□ 0.87
HDAC7-206ENST00000421231 GRIPAP1Q4V328 841 aa20.46■□□□□ 0.87
HDAC7-206ENST00000421231 XAGE3Q8WTP9 111 aa20.46■□□□□ 0.87
HDAC7-206ENST00000421231 NECTIN2Q92692 538 aa20.46■□□□□ 0.87
HDAC7-206ENST00000421231 NLRP3Q96P20 1036 aa20.46■□□□□ 0.87
HDAC7-206ENST00000421231 DDX21Q9NR30 783 aaKnown RBP eCLIP20.46■□□□□ 0.87
HDAC7-206ENST00000421231 CREBZFQ9NS37 354 aa20.46■□□□□ 0.87
HDAC7-206ENST00000421231 HACL1Q9UJ83 578 aa20.46■□□□□ 0.87
HDAC7-206ENST00000421231 PPEF1O14829 653 aaPredicted RBP20.45■□□□□ 0.86
HDAC7-206ENST00000421231 ITGBL1O95965 494 aaPredicted RBP20.45■□□□□ 0.86
HDAC7-206ENST00000421231 NLRP10Q86W26 655 aa20.45■□□□□ 0.86
HDAC7-206ENST00000421231 GPC2Q8N158 579 aa20.45■□□□□ 0.86
HDAC7-206ENST00000421231 RNF123Q5XPI4 1314 aa20.45■□□□□ 0.86
HDAC7-206ENST00000421231 EPHX2P34913 555 aa20.44■□□□□ 0.86
HDAC7-206ENST00000421231 AIMP1Q12904 312 aaKnown RBP20.44■□□□□ 0.86
HDAC7-206ENST00000421231 WDR43Q15061 677 aaKnown RBP eCLIP20.44■□□□□ 0.86
HDAC7-206ENST00000421231 HSP90AB3PQ58FF7 597 aa20.44■□□□□ 0.86
HDAC7-206ENST00000421231 LTBP1Q14766 1721 aa20.44■□□□□ 0.86
HDAC7-206ENST00000421231 TCIRG1Q13488 830 aa20.43■□□□□ 0.86
HDAC7-206ENST00000421231 COL13A1Q5TAT6 717 aaPredicted RBP20.43■□□□□ 0.86
HDAC7-206ENST00000421231 JDP2Q8WYK2 163 aa20.43■□□□□ 0.86
HDAC7-206ENST00000421231 PRKRIP1Q9H875 184 aaPredicted RBP20.43■□□□□ 0.86
HDAC7-206ENST00000421231 ABCC4O15439 1325 aa20.43■□□□□ 0.86
HDAC7-206ENST00000421231 TCERG1O14776 1098 aaKnown RBP20.42■□□□□ 0.86
HDAC7-206ENST00000421231 CHPF2Q9P2E5 772 aa20.42■□□□□ 0.86
HDAC7-206ENST00000421231 ATP6V0A2Q9Y487 856 aa20.42■□□□□ 0.86
HDAC7-206ENST00000421231 HOXB7P09629 217 aa20.41■□□□□ 0.86
HDAC7-206ENST00000421231 HSPA1AP0DMV8 641 aaKnown RBP20.41■□□□□ 0.86
HDAC7-206ENST00000421231 HSPA1BP0DMV9 641 aaKnown RBP20.41■□□□□ 0.86
HDAC7-206ENST00000421231 EAPPQ56P03 285 aaPredicted RBP20.41■□□□□ 0.86
HDAC7-206ENST00000421231 LAS1LQ9Y4W2 734 aaKnown RBP20.41■□□□□ 0.86
HDAC7-206ENST00000421231 PCNTO95613 3336 aa20.4■□□□□ 0.86
HDAC7-206ENST00000421231 HCLS1P14317 486 aaPredicted RBP20.4■□□□□ 0.86
HDAC7-206ENST00000421231 EIF6P56537 245 aaKnown RBP20.4■□□□□ 0.86
HDAC7-206ENST00000421231 PNMA8AQ86V59 439 aaPredicted RBP20.4■□□□□ 0.86
HDAC7-206ENST00000421231 LARGE2Q8N3Y3 721 aa20.4■□□□□ 0.86
HDAC7-206ENST00000421231 CFAP44Q96MT7 982 aa20.4■□□□□ 0.86
HDAC7-206ENST00000421231 SCNN1DP51172 638 aa20.39■□□□□ 0.85
HDAC7-206ENST00000421231 HDGFL1Q5TGJ6 251 aa20.39■□□□□ 0.85
HDAC7-206ENST00000421231 RTFDC1Q9BY42 306 aaPredicted RBP20.39■□□□□ 0.85
HDAC7-206ENST00000421231 MKRN1Q9UHC7 482 aaKnown RBP20.39■□□□□ 0.85
HDAC7-206ENST00000421231 CNTNAP1P78357 1384 aa20.38■□□□□ 0.85
HDAC7-206ENST00000421231 SH3TC1Q8TE82 1336 aa20.38■□□□□ 0.85
HDAC7-206ENST00000421231 BBOX1O75936 387 aa20.38■□□□□ 0.85
HDAC7-206ENST00000421231 ZNF853P0CG23 659 aa20.38■□□□□ 0.85
HDAC7-206ENST00000421231 PLBD2Q8NHP8 589 aa20.38■□□□□ 0.85
HDAC7-206ENST00000421231 VPS33BQ9H267 617 aa20.38■□□□□ 0.85
HDAC7-206ENST00000421231 TRMT112Q9UI30 125 aaKnown RBP20.38■□□□□ 0.85
HDAC7-206ENST00000421231 GJA3Q9Y6H8 435 aa20.38■□□□□ 0.85
HDAC7-206ENST00000421231 TAF1P21675 1872 aa20.38■□□□□ 0.85
HDAC7-206ENST00000421231 DDX60Q8IY21 1712 aaKnown RBP20.38■□□□□ 0.85
HDAC7-206ENST00000421231 PPIP5K2O43314 1243 aa20.37■□□□□ 0.85
HDAC7-206ENST00000421231 MAP1SQ66K74 1059 aaPredicted RBP20.37■□□□□ 0.85
HDAC7-206ENST00000421231 SP8Q8IXZ3 490 aa20.37■□□□□ 0.85
HDAC7-206ENST00000421231 ISCA1Q9BUE6 129 aa20.37■□□□□ 0.85
HDAC7-206ENST00000421231 MBIPQ9NS73 344 aa20.37■□□□□ 0.85
HDAC7-206ENST00000421231 DBF4Q9UBU7 674 aaPredicted RBP20.37■□□□□ 0.85
HDAC7-206ENST00000421231 CLEC11AQ9Y240 323 aa20.37■□□□□ 0.85
HDAC7-206ENST00000421231 TMEM88BA6NKF7 163 aa20.36■□□□□ 0.85
HDAC7-206ENST00000421231 AOC3Q16853 763 aa20.36■□□□□ 0.85
HDAC7-206ENST00000421231 DUSP27Q5VZP5 1158 aa20.36■□□□□ 0.85
HDAC7-206ENST00000421231 ANKRD13DQ6ZTN6 518 aa20.36■□□□□ 0.85
HDAC7-206ENST00000421231 NIM1KQ8IY84 436 aa20.36■□□□□ 0.85
HDAC7-206ENST00000421231 CNTROBQ8N137 903 aa20.36■□□□□ 0.85
HDAC7-206ENST00000421231 EPS15P42566 896 aa20.35■□□□□ 0.85
HDAC7-206ENST00000421231 GRAPQ13588 217 aa20.35■□□□□ 0.85
HDAC7-206ENST00000421231 GRAPLQ8TC17 118 aaPredicted RBP20.35■□□□□ 0.85
HDAC7-206ENST00000421231 LRRC37AA6NMS7 1700 aa20.35■□□□□ 0.85
HDAC7-206ENST00000421231 DUOX1Q9NRD9 1551 aa20.34■□□□□ 0.85
HDAC7-206ENST00000421231 TMX4Q9H1E5 349 aaPredicted RBP20.34■□□□□ 0.85
HDAC7-206ENST00000421231 APAF1O14727 1248 aa20.33■□□□□ 0.85
HDAC7-206ENST00000421231 LMOD1P29536 600 aaPredicted RBP20.33■□□□□ 0.85
HDAC7-206ENST00000421231 DDX46Q7L014 1031 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms