RNA–Protein interactions for RNA: ENST00000418189.5

HDAC11-209, Transcript of histone deacetylase 11, human

TSL 5

Gene HDAC11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC11-209	ENST00000418189	IARS	P41252	1262 aa	Known RBP	32.27	■■■□□ 2.76
HDAC11-209	ENST00000418189	CCDC146	Q8IYE0	955 aa		32.27	■■■□□ 2.76
HDAC11-209	ENST00000418189	PSMD1	Q99460	953 aa		32.27	■■■□□ 2.76
HDAC11-209	ENST00000418189	ZNF541	Q9H0D2	1346 aa		32.26	■■■□□ 2.76
HDAC11-209	ENST00000418189	PROSER3	Q2NL68	480 aa		32.26	■■■□□ 2.75
HDAC11-209	ENST00000418189	POTEI	P0CG38	1075 aa		32.25	■■■□□ 2.75
HDAC11-209	ENST00000418189	POTEJ	P0CG39	1038 aa		32.25	■■■□□ 2.75
HDAC11-209	ENST00000418189	RUNDC1	Q96C34	613 aa		32.25	■■■□□ 2.75
HDAC11-209	ENST00000418189	ANXA1	P04083	346 aa		32.24	■■■□□ 2.75
HDAC11-209	ENST00000418189	WDR43	Q15061	677 aa	Known RBP eCLIP	32.24	■■■□□ 2.75
HDAC11-209	ENST00000418189	NEUROD2	Q15784	382 aa		32.24	■■■□□ 2.75
HDAC11-209	ENST00000418189	RBM17	Q96I25	401 aa	Known RBP	32.24	■■■□□ 2.75
HDAC11-209	ENST00000418189	CRAMP1	Q96RY5	1269 aa		32.24	■■■□□ 2.75
HDAC11-209	ENST00000418189	FZD9	O00144	591 aa		32.23	■■■□□ 2.75
HDAC11-209	ENST00000418189	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.23	■■■□□ 2.75
HDAC11-209	ENST00000418189	CHL1	O00533	1208 aa		32.22	■■■□□ 2.75
HDAC11-209	ENST00000418189	GRIPAP1	Q4V328	841 aa		32.22	■■■□□ 2.75
HDAC11-209	ENST00000418189	LDHD	Q86WU2	507 aa		32.21	■■■□□ 2.75
HDAC11-209	ENST00000418189	UTP14A	Q9BVJ6	771 aa	Known RBP	32.21	■■■□□ 2.75
HDAC11-209	ENST00000418189	TRIM35	Q9UPQ4	493 aa		32.21	■■■□□ 2.75
HDAC11-209	ENST00000418189	RNF123	Q5XPI4	1314 aa		32.21	■■■□□ 2.75
HDAC11-209	ENST00000418189	C3orf67	Q6ZVT6	689 aa		32.2	■■■□□ 2.75
HDAC11-209	ENST00000418189	LAMB2	P55268	1798 aa		32.19	■■■□□ 2.74
HDAC11-209	ENST00000418189	PPEF1	O14829	653 aa	Predicted RBP	32.19	■■■□□ 2.74
HDAC11-209	ENST00000418189	HSP90AB3P	Q58FF7	597 aa		32.19	■■■□□ 2.74
HDAC11-209	ENST00000418189	SLC10A5	Q5PT55	438 aa		32.19	■■■□□ 2.74
HDAC11-209	ENST00000418189	COPS6	Q7L5N1	327 aa		32.19	■■■□□ 2.74
HDAC11-209	ENST00000418189	NECTIN2	Q92692	538 aa		32.19	■■■□□ 2.74
HDAC11-209	ENST00000418189	NLRP3	Q96P20	1036 aa		32.19	■■■□□ 2.74
HDAC11-209	ENST00000418189	ADAMTSL1	Q8N6G6	1762 aa		32.18	■■■□□ 2.74
HDAC11-209	ENST00000418189	XAGE3	Q8WTP9	111 aa		32.18	■■■□□ 2.74
HDAC11-209	ENST00000418189	JDP2	Q8WYK2	163 aa		32.18	■■■□□ 2.74
HDAC11-209	ENST00000418189	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.18	■■■□□ 2.74
HDAC11-209	ENST00000418189	HACL1	Q9UJ83	578 aa		32.18	■■■□□ 2.74
HDAC11-209	ENST00000418189	ADAMTS8	Q9UP79	889 aa		32.17	■■■□□ 2.74
HDAC11-209	ENST00000418189	COL4A5	P29400	1685 aa		32.17	■■■□□ 2.74
HDAC11-209	ENST00000418189	AIMP1	Q12904	312 aa	Known RBP	32.16	■■■□□ 2.74
HDAC11-209	ENST00000418189	KRT24	Q2M2I5	525 aa		32.16	■■■□□ 2.74
HDAC11-209	ENST00000418189	GPC2	Q8N158	579 aa		32.16	■■■□□ 2.74
HDAC11-209	ENST00000418189	CREBZF	Q9NS37	354 aa		32.16	■■■□□ 2.74
HDAC11-209	ENST00000418189	LAS1L	Q9Y4W2	734 aa	Known RBP	32.15	■■■□□ 2.74
HDAC11-209	ENST00000418189	HOXB7	P09629	217 aa		32.14	■■■□□ 2.74
HDAC11-209	ENST00000418189	NLRP10	Q86W26	655 aa		32.14	■■■□□ 2.74
HDAC11-209	ENST00000418189	EPHX2	P34913	555 aa		32.13	■■■□□ 2.73
HDAC11-209	ENST00000418189	PASK	Q96RG2	1323 aa		32.13	■■■□□ 2.73
HDAC11-209	ENST00000418189	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.13	■■■□□ 2.73
HDAC11-209	ENST00000418189	EIF6	P56537	245 aa	Known RBP	32.12	■■■□□ 2.73
HDAC11-209	ENST00000418189	TCIRG1	Q13488	830 aa		32.12	■■■□□ 2.73
HDAC11-209	ENST00000418189	EAPP	Q56P03	285 aa	Predicted RBP	32.12	■■■□□ 2.73
HDAC11-209	ENST00000418189	SLC51A	Q86UW1	340 aa		32.12	■■■□□ 2.73
HDAC11-209	ENST00000418189	ABCC4	O15439	1325 aa		32.11	■■■□□ 2.73
HDAC11-209	ENST00000418189	TCERG1	O14776	1098 aa	Known RBP	32.11	■■■□□ 2.73
HDAC11-209	ENST00000418189	PNMA8A	Q86V59	439 aa	Predicted RBP	32.11	■■■□□ 2.73
HDAC11-209	ENST00000418189	LARGE2	Q8N3Y3	721 aa		32.11	■■■□□ 2.73
HDAC11-209	ENST00000418189	CHPF2	Q9P2E5	772 aa		32.11	■■■□□ 2.73
HDAC11-209	ENST00000418189	HDGFL1	Q5TGJ6	251 aa		32.1	■■■□□ 2.73
HDAC11-209	ENST00000418189	TMX4	Q9H1E5	349 aa	Predicted RBP	32.1	■■■□□ 2.73
HDAC11-209	ENST00000418189	ATP6V0A2	Q9Y487	856 aa		32.1	■■■□□ 2.73
HDAC11-209	ENST00000418189	PCNT	O95613	3336 aa		32.1	■■■□□ 2.73
HDAC11-209	ENST00000418189	CFAP44	Q96MT7	982 aa		32.09	■■■□□ 2.73
HDAC11-209	ENST00000418189	TRMT112	Q9UI30	125 aa	Known RBP	32.08	■■■□□ 2.73
HDAC11-209	ENST00000418189	SH3TC1	Q8TE82	1336 aa		32.07	■■■□□ 2.72
HDAC11-209	ENST00000418189	LTBP1	Q14766	1721 aa		32.07	■■■□□ 2.72
HDAC11-209	ENST00000418189	ITGBL1	O95965	494 aa	Predicted RBP	32.07	■■■□□ 2.72
HDAC11-209	ENST00000418189	HCLS1	P14317	486 aa	Predicted RBP	32.07	■■■□□ 2.72
HDAC11-209	ENST00000418189	CLEC11A	Q9Y240	323 aa		32.07	■■■□□ 2.72
HDAC11-209	ENST00000418189	VPS33B	Q9H267	617 aa		32.06	■■■□□ 2.72
HDAC11-209	ENST00000418189	DBF4	Q9UBU7	674 aa	Predicted RBP	32.06	■■■□□ 2.72
HDAC11-209	ENST00000418189	GJA3	Q9Y6H8	435 aa		32.06	■■■□□ 2.72
HDAC11-209	ENST00000418189	DDX60	Q8IY21	1712 aa	Known RBP	32.06	■■■□□ 2.72
HDAC11-209	ENST00000418189	BBOX1	O75936	387 aa		32.05	■■■□□ 2.72
HDAC11-209	ENST00000418189	HSPA1A	P0DMV8	641 aa	Known RBP	32.05	■■■□□ 2.72
HDAC11-209	ENST00000418189	HSPA1B	P0DMV9	641 aa	Known RBP	32.05	■■■□□ 2.72
HDAC11-209	ENST00000418189	NIM1K	Q8IY84	436 aa		32.05	■■■□□ 2.72
HDAC11-209	ENST00000418189	PLBD2	Q8NHP8	589 aa		32.05	■■■□□ 2.72
HDAC11-209	ENST00000418189	PPIP5K2	O43314	1243 aa		32.04	■■■□□ 2.72
HDAC11-209	ENST00000418189	COL13A1	Q5TAT6	717 aa	Predicted RBP	32.04	■■■□□ 2.72
HDAC11-209	ENST00000418189	MKRN1	Q9UHC7	482 aa	Known RBP	32.04	■■■□□ 2.72
HDAC11-209	ENST00000418189	LMOD1	P29536	600 aa	Predicted RBP	32.03	■■■□□ 2.72
HDAC11-209	ENST00000418189	ANKRD13D	Q6ZTN6	518 aa		32.03	■■■□□ 2.72
HDAC11-209	ENST00000418189	SUPT20H	Q8NEM7	779 aa		32.03	■■■□□ 2.72
HDAC11-209	ENST00000418189	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.03	■■■□□ 2.72
HDAC11-209	ENST00000418189	MBIP	Q9NS73	344 aa		32.03	■■■□□ 2.72
HDAC11-209	ENST00000418189	CNTNAP1	P78357	1384 aa		32.03	■■■□□ 2.72
HDAC11-209	ENST00000418189	TAF1	P21675	1872 aa		32.02	■■■□□ 2.72
HDAC11-209	ENST00000418189	DUSP27	Q5VZP5	1158 aa		32.02	■■■□□ 2.72
HDAC11-209	ENST00000418189	DDX46	Q7L014	1031 aa	Known RBP	32.02	■■■□□ 2.72
HDAC11-209	ENST00000418189	SP8	Q8IXZ3	490 aa		32.02	■■■□□ 2.72
HDAC11-209	ENST00000418189	HYPK	Q9NX55	129 aa		32.02	■■■□□ 2.72
HDAC11-209	ENST00000418189	TMEM88B	A6NKF7	163 aa		32.01	■■■□□ 2.71
HDAC11-209	ENST00000418189	ZNF853	P0CG23	659 aa		32.01	■■■□□ 2.71
HDAC11-209	ENST00000418189	SCNN1D	P51172	638 aa		32.01	■■■□□ 2.71
HDAC11-209	ENST00000418189	AOC3	Q16853	763 aa		32.01	■■■□□ 2.71
HDAC11-209	ENST00000418189	ISCA1	Q9BUE6	129 aa		32.01	■■■□□ 2.71
HDAC11-209	ENST00000418189	GRAP	Q13588	217 aa		32	■■■□□ 2.71
HDAC11-209	ENST00000418189	MAP1S	Q66K74	1059 aa	Predicted RBP	32	■■■□□ 2.71
HDAC11-209	ENST00000418189	CNTROB	Q8N137	903 aa		32	■■■□□ 2.71
HDAC11-209	ENST00000418189	GRAPL	Q8TC17	118 aa	Predicted RBP	32	■■■□□ 2.71
HDAC11-209	ENST00000418189	LRRC37A	A6NMS7	1700 aa		32	■■■□□ 2.71
HDAC11-209	ENST00000418189	DPP8	Q6V1X1	898 aa	Predicted RBP	31.99	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms