RNA–Protein interactions for RNA: ENST00000416650.5

APTR-202, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 3

Gene APTR, Length 609 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-202ENST00000416650 ADAMTSL1Q8N6G6 1762 aa28.35■■■□□ 2.13
APTR-202ENST00000416650 HOXA10P31260 410 aaPredicted RBP28.35■■■□□ 2.13
APTR-202ENST00000416650 L3MBTL3Q96JM7 780 aaPredicted RBP28.35■■■□□ 2.13
APTR-202ENST00000416650 TRIM35Q9UPQ4 493 aa28.35■■■□□ 2.13
APTR-202ENST00000416650 ZNF541Q9H0D2 1346 aa28.35■■■□□ 2.13
APTR-202ENST00000416650 CHL1O00533 1208 aa28.34■■■□□ 2.13
APTR-202ENST00000416650 IARSP41252 1262 aaKnown RBP28.34■■■□□ 2.13
APTR-202ENST00000416650 IFFO2Q5TF58 517 aa28.34■■■□□ 2.13
APTR-202ENST00000416650 JMYQ8N9B5 988 aa28.34■■■□□ 2.13
APTR-202ENST00000416650 PSMD1Q99460 953 aa28.34■■■□□ 2.13
APTR-202ENST00000416650 COL4A5P29400 1685 aa28.34■■■□□ 2.13
APTR-202ENST00000416650 DDX60Q8IY21 1712 aaKnown RBP28.34■■■□□ 2.13
APTR-202ENST00000416650 IQCA1LA6NCM1 817 aa28.33■■■□□ 2.13
APTR-202ENST00000416650 NECTIN2Q92692 538 aa28.33■■■□□ 2.13
APTR-202ENST00000416650 ADAMTS8Q9UP79 889 aa28.33■■■□□ 2.13
APTR-202ENST00000416650 TAF1P21675 1872 aa28.33■■■□□ 2.13
APTR-202ENST00000416650 KRT24Q2M2I5 525 aa28.32■■■□□ 2.12
APTR-202ENST00000416650 CC2D2BQ6DHV5 1058 aa28.32■■■□□ 2.12
APTR-202ENST00000416650 SYNE4Q8N205 404 aa28.32■■■□□ 2.12
APTR-202ENST00000416650 PRKRIP1Q9H875 184 aaPredicted RBP28.32■■■□□ 2.12
APTR-202ENST00000416650 POTEIP0CG38 1075 aa28.31■■■□□ 2.12
APTR-202ENST00000416650 POTEJP0CG39 1038 aa28.31■■■□□ 2.12
APTR-202ENST00000416650 CHADLQ6NUI6 762 aa28.31■■■□□ 2.12
APTR-202ENST00000416650 C3orf67Q6ZVT6 689 aa28.31■■■□□ 2.12
APTR-202ENST00000416650 CRAMP1Q96RY5 1269 aa28.31■■■□□ 2.12
APTR-202ENST00000416650 LAS1LQ9Y4W2 734 aaKnown RBP28.31■■■□□ 2.12
APTR-202ENST00000416650 RNF123Q5XPI4 1314 aa28.31■■■□□ 2.12
APTR-202ENST00000416650 COPS6Q7L5N1 327 aa28.3■■■□□ 2.12
APTR-202ENST00000416650 XAGE3Q8WTP9 111 aa28.3■■■□□ 2.12
APTR-202ENST00000416650 RBM17Q96I25 401 aaKnown RBP28.3■■■□□ 2.12
APTR-202ENST00000416650 UTP14AQ9BVJ6 771 aaKnown RBP28.3■■■□□ 2.12
APTR-202ENST00000416650 DDX21Q9NR30 783 aaKnown RBP eCLIP28.3■■■□□ 2.12
APTR-202ENST00000416650 PPEF1O14829 653 aaPredicted RBP28.29■■■□□ 2.12
APTR-202ENST00000416650 HSP90AB3PQ58FF7 597 aa28.29■■■□□ 2.12
APTR-202ENST00000416650 FZD9O00144 591 aa28.28■■■□□ 2.12
APTR-202ENST00000416650 AIMP1Q12904 312 aaKnown RBP28.28■■■□□ 2.12
APTR-202ENST00000416650 NLRP3Q96P20 1036 aa28.28■■■□□ 2.12
APTR-202ENST00000416650 TAF1DQ9H5J8 278 aaPredicted RBP28.28■■■□□ 2.12
APTR-202ENST00000416650 GRIPAP1Q4V328 841 aa28.27■■■□□ 2.12
APTR-202ENST00000416650 LRRC37AA6NMS7 1700 aa28.26■■■□□ 2.12
APTR-202ENST00000416650 LTBP1Q14766 1721 aa28.26■■■□□ 2.12
APTR-202ENST00000416650 HOXB7P09629 217 aa28.26■■■□□ 2.11
APTR-202ENST00000416650 SLC10A5Q5PT55 438 aa28.26■■■□□ 2.11
APTR-202ENST00000416650 SLC51AQ86UW1 340 aa28.26■■■□□ 2.11
APTR-202ENST00000416650 CHPF2Q9P2E5 772 aa28.26■■■□□ 2.11
APTR-202ENST00000416650 HDGFL1Q5TGJ6 251 aa28.25■■■□□ 2.11
APTR-202ENST00000416650 NLRP10Q86W26 655 aa28.25■■■□□ 2.11
APTR-202ENST00000416650 LDHDQ86WU2 507 aa28.25■■■□□ 2.11
APTR-202ENST00000416650 JDP2Q8WYK2 163 aa28.25■■■□□ 2.11
APTR-202ENST00000416650 HACL1Q9UJ83 578 aa28.24■■■□□ 2.11
APTR-202ENST00000416650 ABCC4O15439 1325 aa28.23■■■□□ 2.11
APTR-202ENST00000416650 TCIRG1Q13488 830 aa28.23■■■□□ 2.11
APTR-202ENST00000416650 GPC2Q8N158 579 aa28.23■■■□□ 2.11
APTR-202ENST00000416650 CFAP44Q96MT7 982 aa28.23■■■□□ 2.11
APTR-202ENST00000416650 TCERG1O14776 1098 aaKnown RBP28.22■■■□□ 2.11
APTR-202ENST00000416650 EPHX2P34913 555 aa28.2■■■□□ 2.1
APTR-202ENST00000416650 EAPPQ56P03 285 aaPredicted RBP28.2■■■□□ 2.1
APTR-202ENST00000416650 LARGE2Q8N3Y3 721 aa28.2■■■□□ 2.1
APTR-202ENST00000416650 CREBZFQ9NS37 354 aa28.2■■■□□ 2.1
APTR-202ENST00000416650 DBF4Q9UBU7 674 aaPredicted RBP28.2■■■□□ 2.1
APTR-202ENST00000416650 SH3TC1Q8TE82 1336 aa28.19■■■□□ 2.1
APTR-202ENST00000416650 EIF6P56537 245 aaKnown RBP28.19■■■□□ 2.1
APTR-202ENST00000416650 PLBD2Q8NHP8 589 aa28.19■■■□□ 2.1
APTR-202ENST00000416650 MBIPQ9NS73 344 aa28.19■■■□□ 2.1
APTR-202ENST00000416650 TRMT112Q9UI30 125 aaKnown RBP28.19■■■□□ 2.1
APTR-202ENST00000416650 ATP6V0A2Q9Y487 856 aa28.19■■■□□ 2.1
APTR-202ENST00000416650 PASKQ96RG2 1323 aa28.18■■■□□ 2.1
APTR-202ENST00000416650 HCLS1P14317 486 aaPredicted RBP28.18■■■□□ 2.1
APTR-202ENST00000416650 TMX4Q9H1E5 349 aaPredicted RBP28.18■■■□□ 2.1
APTR-202ENST00000416650 DUSP27Q5VZP5 1158 aa28.17■■■□□ 2.1
APTR-202ENST00000416650 TRPM7Q96QT4 1865 aa28.17■■■□□ 2.1
APTR-202ENST00000416650 DUOX1Q9NRD9 1551 aa28.16■■■□□ 2.1
APTR-202ENST00000416650 APAF1O14727 1248 aa28.16■■■□□ 2.1
APTR-202ENST00000416650 ZNF853P0CG23 659 aa28.16■■■□□ 2.1
APTR-202ENST00000416650 PNMA8AQ86V59 439 aaPredicted RBP28.16■■■□□ 2.1
APTR-202ENST00000416650 NIM1KQ8IY84 436 aa28.15■■■□□ 2.1
APTR-202ENST00000416650 HYPKQ9NX55 129 aa28.15■■■□□ 2.1
APTR-202ENST00000416650 GJA3Q9Y6H8 435 aa28.15■■■□□ 2.1
APTR-202ENST00000416650 PPIP5K2O43314 1243 aa28.14■■■□□ 2.1
APTR-202ENST00000416650 ANKRD13DQ6ZTN6 518 aa28.14■■■□□ 2.1
APTR-202ENST00000416650 IFT57Q9NWB7 429 aa28.14■■■□□ 2.1
APTR-202ENST00000416650 BBOX1O75936 387 aa28.13■■■□□ 2.09
APTR-202ENST00000416650 CALD1Q05682 793 aaKnown RBP28.13■■■□□ 2.09
APTR-202ENST00000416650 AOC3Q16853 763 aa28.13■■■□□ 2.09
APTR-202ENST00000416650 DDX46Q7L014 1031 aaKnown RBP28.13■■■□□ 2.09
APTR-202ENST00000416650 ISCA1Q9BUE6 129 aa28.13■■■□□ 2.09
APTR-202ENST00000416650 VPS33BQ9H267 617 aa28.13■■■□□ 2.09
APTR-202ENST00000416650 CLEC11AQ9Y240 323 aa28.13■■■□□ 2.09
APTR-202ENST00000416650 ITGBL1O95965 494 aaPredicted RBP28.12■■■□□ 2.09
APTR-202ENST00000416650 GNAI1P63096 354 aa28.12■■■□□ 2.09
APTR-202ENST00000416650 GRAPQ13588 217 aa28.12■■■□□ 2.09
APTR-202ENST00000416650 SUPT20HQ8NEM7 779 aa28.12■■■□□ 2.09
APTR-202ENST00000416650 GRAPLQ8TC17 118 aaPredicted RBP28.12■■■□□ 2.09
APTR-202ENST00000416650 ZNF428Q96B54 188 aa28.12■■■□□ 2.09
APTR-202ENST00000416650 RTFDC1Q9BY42 306 aaPredicted RBP28.12■■■□□ 2.09
APTR-202ENST00000416650 COL4A1P02462 1669 aa28.12■■■□□ 2.09
APTR-202ENST00000416650 LMOD1P29536 600 aaPredicted RBP28.11■■■□□ 2.09
APTR-202ENST00000416650 SCNN1DP51172 638 aa28.11■■■□□ 2.09
APTR-202ENST00000416650 SP8Q8IXZ3 490 aa28.11■■■□□ 2.09
APTR-202ENST00000416650 MKRN1Q9UHC7 482 aaKnown RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms