RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 MSX1P28360 303 aa7.59□□□□□ -1.19
HMGB3P31-201ENST00000413333 ITGAEP38570 1179 aa7.59□□□□□ -1.19
HMGB3P31-201ENST00000413333 IER5Q5VY09 327 aa7.59□□□□□ -1.19
HMGB3P31-201ENST00000413333 ZIC5Q96T25 663 aa7.59□□□□□ -1.19
HMGB3P31-201ENST00000413333 DMGDHQ9UI17 866 aaKnown RBP7.59□□□□□ -1.19
HMGB3P31-201ENST00000413333 GJA3Q9Y6H8 435 aa7.59□□□□□ -1.19
HMGB3P31-201ENST00000413333 FAM187AA6NFU0 413 aa7.58□□□□□ -1.2
HMGB3P31-201ENST00000413333 ATP4AP20648 1035 aa7.58□□□□□ -1.2
HMGB3P31-201ENST00000413333 ERCC5P28715 1186 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P31-201ENST00000413333 ARSDP51689 593 aa7.58□□□□□ -1.2
HMGB3P31-201ENST00000413333 SCARF1Q14162 830 aa7.58□□□□□ -1.2
HMGB3P31-201ENST00000413333 BTLAQ7Z6A9 289 aa7.58□□□□□ -1.2
HMGB3P31-201ENST00000413333 RTCBQ9Y3I0 505 aaKnown RBP7.58□□□□□ -1.2
HMGB3P31-201ENST00000413333 GPC6Q9Y625 555 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P31-201ENST00000413333 TTLL8A6PVC2 850 aa7.57□□□□□ -1.2
HMGB3P31-201ENST00000413333 CPNE3O75131 537 aaKnown RBP7.57□□□□□ -1.2
HMGB3P31-201ENST00000413333 BMP1P13497 986 aa7.57□□□□□ -1.2
HMGB3P31-201ENST00000413333 GNA15P30679 374 aa7.57□□□□□ -1.2
HMGB3P31-201ENST00000413333 HDLBPQ00341 1268 aaKnown RBP7.57□□□□□ -1.2
HMGB3P31-201ENST00000413333 LDLRAD1Q5T700 205 aa7.57□□□□□ -1.2
HMGB3P31-201ENST00000413333 ZNF438Q7Z4V0 828 aa7.57□□□□□ -1.2
HMGB3P31-201ENST00000413333 CFHR5Q9BXR6 569 aa7.57□□□□□ -1.2
HMGB3P31-201ENST00000413333 GPAMQ9HCL2 828 aa7.57□□□□□ -1.2
HMGB3P31-201ENST00000413333 FOXD3Q9UJU5 478 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P31-201ENST00000413333 FNDC3AQ9Y2H6 1198 aaKnown RBP7.57□□□□□ -1.2
HMGB3P31-201ENST00000413333 A0A1B0GTH6 734 aa7.56□□□□□ -1.2
HMGB3P31-201ENST00000413333 A0A1W2PNR3 127 aa7.56□□□□□ -1.2
HMGB3P31-201ENST00000413333 LOC105371045A0A1W2PR82 267 aa7.56□□□□□ -1.2
HMGB3P31-201ENST00000413333 UBAP1LF5GYI3 381 aa7.56□□□□□ -1.2
HMGB3P31-201ENST00000413333 INPP5BP32019 993 aa7.56□□□□□ -1.2
HMGB3P31-201ENST00000413333 WDR44Q5JSH3 913 aa7.56□□□□□ -1.2
HMGB3P31-201ENST00000413333 FBF1Q8TES7 1133 aa7.56□□□□□ -1.2
HMGB3P31-201ENST00000413333 DNAJC25Q9H1X3 360 aa7.56□□□□□ -1.2
HMGB3P31-201ENST00000413333 PDZRN3Q9UPQ7 1066 aa7.56□□□□□ -1.2
HMGB3P31-201ENST00000413333 TRIP4Q15650 581 aaPredicted RBP7.55□□□□□ -1.2
HMGB3P31-201ENST00000413333 USPL1Q5W0Q7 1092 aa7.55□□□□□ -1.2
HMGB3P31-201ENST00000413333 CEP63Q96MT8 703 aa7.55□□□□□ -1.2
HMGB3P31-201ENST00000413333 RUBCNLQ9H714 662 aa7.55□□□□□ -1.2
HMGB3P31-201ENST00000413333 TNFRSF21O75509 655 aa7.54□□□□□ -1.2
HMGB3P31-201ENST00000413333 ZC3H6P61129 1189 aaKnown RBP7.54□□□□□ -1.2
HMGB3P31-201ENST00000413333 GAS2L1Q99501 681 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P31-201ENST00000413333 SPG7Q9UQ90 795 aa7.54□□□□□ -1.2
HMGB3P31-201ENST00000413333 KCNMB2Q9Y691 235 aa7.54□□□□□ -1.2
HMGB3P31-201ENST00000413333 AK5Q9Y6K8 562 aa7.54□□□□□ -1.2
HMGB3P31-201ENST00000413333 PHACTR2O75167 634 aa7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 POLR3DP05423 398 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 EPB42P16452 691 aa7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 NAALADL2Q58DX5 795 aa7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 XKR5Q6UX68 686 aa7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 PI16Q6UXB8 463 aa7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 PGBD3Q8N328 593 aa7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 SNX29Q8TEQ0 813 aa7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 RNF34Q969K3 372 aa7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 C8orf37Q96NL8 207 aa7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 ELP3Q9H9T3 547 aa7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 TMEM63CQ9P1W3 806 aa7.53□□□□□ -1.2
HMGB3P31-201ENST00000413333 SOS2Q07890 1332 aaPredicted RBP7.52□□□□□ -1.2
HMGB3P31-201ENST00000413333 SHROOM4Q9ULL8 1493 aa7.52□□□□□ -1.21
HMGB3P31-201ENST00000413333 EIF4BP23588 611 aaKnown RBP7.52□□□□□ -1.21
HMGB3P31-201ENST00000413333 IRS1P35568 1242 aa7.52□□□□□ -1.21
HMGB3P31-201ENST00000413333 TYRO3Q06418 890 aa7.52□□□□□ -1.21
HMGB3P31-201ENST00000413333 PDE12Q6L8Q7 609 aaKnown RBP7.52□□□□□ -1.21
HMGB3P31-201ENST00000413333 TRIM46Q7Z4K8 759 aa7.52□□□□□ -1.21
HMGB3P31-201ENST00000413333 EPS8L3Q8TE67 593 aaKnown RBP7.52□□□□□ -1.21
HMGB3P31-201ENST00000413333 CCDC74AQ96AQ1 378 aa7.52□□□□□ -1.21
HMGB3P31-201ENST00000413333 FRMD6Q96NE9 622 aa7.52□□□□□ -1.21
HMGB3P31-201ENST00000413333 ZFYVE28Q9HCC9 887 aa7.52□□□□□ -1.21
HMGB3P31-201ENST00000413333 NLRP2Q9NX02 1062 aa7.52□□□□□ -1.21
HMGB3P31-201ENST00000413333 XYLBO75191 536 aa7.51□□□□□ -1.21
HMGB3P31-201ENST00000413333 ZNF76P36508 570 aa7.51□□□□□ -1.21
HMGB3P31-201ENST00000413333 FANCCQ00597 558 aa7.51□□□□□ -1.21
HMGB3P31-201ENST00000413333 NT5DC4Q86YG4 428 aa7.51□□□□□ -1.21
HMGB3P31-201ENST00000413333 ZFP42Q96MM3 310 aa7.51□□□□□ -1.21
HMGB3P31-201ENST00000413333 BRD7Q9NPI1 651 aa7.51□□□□□ -1.21
HMGB3P31-201ENST00000413333 PPP1R1BQ9UD71 204 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P31-201ENST00000413333 F11P03951 625 aa7.5□□□□□ -1.21
HMGB3P31-201ENST00000413333 CTSHP09668 335 aa7.5□□□□□ -1.21
HMGB3P31-201ENST00000413333 GRNP28799 593 aaKnown RBP7.5□□□□□ -1.21
HMGB3P31-201ENST00000413333 ZCCHC2Q9C0B9 1178 aaKnown RBP7.5□□□□□ -1.21
HMGB3P31-201ENST00000413333 CRISPLD1Q9H336 500 aa7.5□□□□□ -1.21
HMGB3P31-201ENST00000413333 GADD45BO75293 160 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P31-201ENST00000413333 AVPP01185 164 aa7.49□□□□□ -1.21
HMGB3P31-201ENST00000413333 METTL16Q86W50 562 aaKnown RBP7.49□□□□□ -1.21
HMGB3P31-201ENST00000413333 C1orf127Q8N9H9 656 aa7.49□□□□□ -1.21
HMGB3P31-201ENST00000413333 CRELD1Q96HD1 420 aa7.49□□□□□ -1.21
HMGB3P31-201ENST00000413333 DRC1Q96MC2 740 aa7.49□□□□□ -1.21
HMGB3P31-201ENST00000413333 C12orf49Q9H741 205 aa7.49□□□□□ -1.21
HMGB3P31-201ENST00000413333 NPHS2Q9NP85 383 aa7.49□□□□□ -1.21
HMGB3P31-201ENST00000413333 METTL5Q9NRN9 209 aaKnown RBP7.49□□□□□ -1.21
HMGB3P31-201ENST00000413333 CNTN3Q9P232 1028 aa7.49□□□□□ -1.21
HMGB3P31-201ENST00000413333 DNMT3LQ9UJW3 386 aa7.49□□□□□ -1.21
HMGB3P31-201ENST00000413333 DYRK1BQ9Y463 629 aa7.49□□□□□ -1.21
HMGB3P31-201ENST00000413333 EREGO14944 169 aa7.48□□□□□ -1.21
HMGB3P31-201ENST00000413333 AXIN1O15169 862 aa7.48□□□□□ -1.21
HMGB3P31-201ENST00000413333 RAD51AP2Q09MP3 1159 aa7.48□□□□□ -1.21
HMGB3P31-201ENST00000413333 EFHC2Q5JST6 749 aa7.48□□□□□ -1.21
HMGB3P31-201ENST00000413333 TTC39BQ5VTQ0 682 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P31-201ENST00000413333 RIPOR1Q6ZS17 1223 aa7.48□□□□□ -1.21
HMGB3P31-201ENST00000413333 KRT25Q7Z3Z0 450 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms