RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 ANKRD36CQ5JPF3 1778 aa25.23■■□□□ 1.63
CPSF7-204ENST00000413232 RIC1Q4ADV7 1423 aa25.22■■□□□ 1.63
CPSF7-204ENST00000413232 LMOD3Q0VAK6 560 aa25.22■■□□□ 1.63
CPSF7-204ENST00000413232 RTKN2Q8IZC4 609 aa25.22■■□□□ 1.63
CPSF7-204ENST00000413232 SYNE4Q8N205 404 aa25.22■■□□□ 1.63
CPSF7-204ENST00000413232 ADAMTS8Q9UP79 889 aa25.22■■□□□ 1.63
CPSF7-204ENST00000413232 CHL1O00533 1208 aa25.21■■□□□ 1.63
CPSF7-204ENST00000413232 HOXA10P31260 410 aaPredicted RBP25.21■■□□□ 1.63
CPSF7-204ENST00000413232 LAMB2P55268 1798 aa25.21■■□□□ 1.63
CPSF7-204ENST00000413232 COL4A5P29400 1685 aa25.2■■□□□ 1.63
CPSF7-204ENST00000413232 RUNDC1Q96C34 613 aa25.2■■□□□ 1.62
CPSF7-204ENST00000413232 IARSP41252 1262 aaKnown RBP25.19■■□□□ 1.62
CPSF7-204ENST00000413232 COPS6Q7L5N1 327 aa25.19■■□□□ 1.62
CPSF7-204ENST00000413232 RPGRQ92834 1020 aaKnown RBP25.19■■□□□ 1.62
CPSF7-204ENST00000413232 L3MBTL3Q96JM7 780 aaPredicted RBP25.19■■□□□ 1.62
CPSF7-204ENST00000413232 TAF1P21675 1872 aa25.18■■□□□ 1.62
CPSF7-204ENST00000413232 XAGE3Q8WTP9 111 aa25.18■■□□□ 1.62
CPSF7-204ENST00000413232 LAS1LQ9Y4W2 734 aaKnown RBP25.18■■□□□ 1.62
CPSF7-204ENST00000413232 FZD9O00144 591 aa25.17■■□□□ 1.62
CPSF7-204ENST00000413232 AIMP1Q12904 312 aaKnown RBP25.17■■□□□ 1.62
CPSF7-204ENST00000413232 CHADLQ6NUI6 762 aa25.17■■□□□ 1.62
CPSF7-204ENST00000413232 PPP1R42Q7Z4L9 355 aa25.17■■□□□ 1.62
CPSF7-204ENST00000413232 TAF1DQ9H5J8 278 aaPredicted RBP25.17■■□□□ 1.62
CPSF7-204ENST00000413232 TCERG1O14776 1098 aaKnown RBP25.16■■□□□ 1.62
CPSF7-204ENST00000413232 WDR43Q15061 677 aaKnown RBP eCLIP25.16■■□□□ 1.62
CPSF7-204ENST00000413232 PARP10Q53GL7 1025 aa25.16■■□□□ 1.62
CPSF7-204ENST00000413232 CRAMP1Q96RY5 1269 aa25.16■■□□□ 1.62
CPSF7-204ENST00000413232 PSMD1Q99460 953 aa25.16■■□□□ 1.62
CPSF7-204ENST00000413232 SLC10A5Q5PT55 438 aa25.15■■□□□ 1.62
CPSF7-204ENST00000413232 UTP14AQ9BVJ6 771 aaKnown RBP25.15■■□□□ 1.62
CPSF7-204ENST00000413232 PRKRIP1Q9H875 184 aaPredicted RBP25.15■■□□□ 1.62
CPSF7-204ENST00000413232 ZNF428Q96B54 188 aa25.14■■□□□ 1.62
CPSF7-204ENST00000413232 RBM17Q96I25 401 aaKnown RBP25.14■■□□□ 1.62
CPSF7-204ENST00000413232 DDX21Q9NR30 783 aaKnown RBP eCLIP25.14■■□□□ 1.62
CPSF7-204ENST00000413232 IQCA1LA6NCM1 817 aa25.13■■□□□ 1.61
CPSF7-204ENST00000413232 CC2D2BQ6DHV5 1058 aa25.13■■□□□ 1.61
CPSF7-204ENST00000413232 NLRP10Q86W26 655 aa25.13■■□□□ 1.61
CPSF7-204ENST00000413232 CHPF2Q9P2E5 772 aa25.13■■□□□ 1.61
CPSF7-204ENST00000413232 ADAMTSL1Q8N6G6 1762 aa25.13■■□□□ 1.61
CPSF7-204ENST00000413232 PPEF1O14829 653 aaPredicted RBP25.12■■□□□ 1.61
CPSF7-204ENST00000413232 NLRP3Q96P20 1036 aa25.12■■□□□ 1.61
CPSF7-204ENST00000413232 RNF123Q5XPI4 1314 aa25.12■■□□□ 1.61
CPSF7-204ENST00000413232 TCIRG1Q13488 830 aa25.11■■□□□ 1.61
CPSF7-204ENST00000413232 LTBP1Q14766 1721 aa25.11■■□□□ 1.61
CPSF7-204ENST00000413232 HCLS1P14317 486 aaPredicted RBP25.1■■□□□ 1.61
CPSF7-204ENST00000413232 LDHDQ86WU2 507 aa25.1■■□□□ 1.61
CPSF7-204ENST00000413232 EAPPQ56P03 285 aaPredicted RBP25.09■■□□□ 1.61
CPSF7-204ENST00000413232 HACL1Q9UJ83 578 aa25.09■■□□□ 1.61
CPSF7-204ENST00000413232 ABCC4O15439 1325 aa25.09■■□□□ 1.61
CPSF7-204ENST00000413232 PASKQ96RG2 1323 aa25.09■■□□□ 1.61
CPSF7-204ENST00000413232 ITGBL1O95965 494 aaPredicted RBP25.08■■□□□ 1.61
CPSF7-204ENST00000413232 EPHX2P34913 555 aa25.08■■□□□ 1.61
CPSF7-204ENST00000413232 HDGFL1Q5TGJ6 251 aa25.08■■□□□ 1.61
CPSF7-204ENST00000413232 GPC2Q8N158 579 aa25.08■■□□□ 1.61
CPSF7-204ENST00000413232 JDP2Q8WYK2 163 aa25.08■■□□□ 1.61
CPSF7-204ENST00000413232 CFAP44Q96MT7 982 aa25.08■■□□□ 1.61
CPSF7-204ENST00000413232 DDX60Q8IY21 1712 aaKnown RBP25.08■■□□□ 1.61
CPSF7-204ENST00000413232 HSP90AB3PQ58FF7 597 aa25.07■■□□□ 1.6
CPSF7-204ENST00000413232 MBIPQ9NS73 344 aa25.07■■□□□ 1.6
CPSF7-204ENST00000413232 ATP6V0A2Q9Y487 856 aa25.07■■□□□ 1.6
CPSF7-204ENST00000413232 APAF1O14727 1248 aa25.06■■□□□ 1.6
CPSF7-204ENST00000413232 COL13A1Q5TAT6 717 aaPredicted RBP25.06■■□□□ 1.6
CPSF7-204ENST00000413232 DUSP27Q5VZP5 1158 aa25.06■■□□□ 1.6
CPSF7-204ENST00000413232 LARGE2Q8N3Y3 721 aa25.06■■□□□ 1.6
CPSF7-204ENST00000413232 CREBZFQ9NS37 354 aa25.06■■□□□ 1.6
CPSF7-204ENST00000413232 TRMT112Q9UI30 125 aaKnown RBP25.06■■□□□ 1.6
CPSF7-204ENST00000413232 ZNF853P0CG23 659 aa25.05■■□□□ 1.6
CPSF7-204ENST00000413232 GRIPAP1Q4V328 841 aa25.05■■□□□ 1.6
CPSF7-204ENST00000413232 GJA3Q9Y6H8 435 aa25.05■■□□□ 1.6
CPSF7-204ENST00000413232 HOXB7P09629 217 aa25.04■■□□□ 1.6
CPSF7-204ENST00000413232 PLBD2Q8NHP8 589 aa25.04■■□□□ 1.6
CPSF7-204ENST00000413232 MKRN1Q9UHC7 482 aaKnown RBP25.04■■□□□ 1.6
CPSF7-204ENST00000413232 EIF6P56537 245 aaKnown RBP25.03■■□□□ 1.6
CPSF7-204ENST00000413232 AOC3Q16853 763 aa25.03■■□□□ 1.6
CPSF7-204ENST00000413232 ANKRD13DQ6ZTN6 518 aa25.03■■□□□ 1.6
CPSF7-204ENST00000413232 ISCA1Q9BUE6 129 aa25.03■■□□□ 1.6
CPSF7-204ENST00000413232 DBF4Q9UBU7 674 aaPredicted RBP25.03■■□□□ 1.6
CPSF7-204ENST00000413232 CLEC11AQ9Y240 323 aa25.03■■□□□ 1.6
CPSF7-204ENST00000413232 SH3TC1Q8TE82 1336 aa25.03■■□□□ 1.6
CPSF7-204ENST00000413232 COL4A1P02462 1669 aa25.02■■□□□ 1.6
CPSF7-204ENST00000413232 ATP5J2-PTCD1G3V325 749 aa25.02■■□□□ 1.6
CPSF7-204ENST00000413232 HSPA1AP0DMV8 641 aaKnown RBP25.02■■□□□ 1.6
CPSF7-204ENST00000413232 HSPA1BP0DMV9 641 aaKnown RBP25.02■■□□□ 1.6
CPSF7-204ENST00000413232 SCNN1DP51172 638 aa25.02■■□□□ 1.6
CPSF7-204ENST00000413232 MAP1SQ66K74 1059 aaPredicted RBP25.02■■□□□ 1.6
CPSF7-204ENST00000413232 PPIP5K2O43314 1243 aa25.01■■□□□ 1.59
CPSF7-204ENST00000413232 EPS15P42566 896 aa25.01■■□□□ 1.59
CPSF7-204ENST00000413232 CCDC184Q52MB2 194 aa25.01■■□□□ 1.59
CPSF7-204ENST00000413232 BBOX1O75936 387 aa25■■□□□ 1.59
CPSF7-204ENST00000413232 PNMA8AQ86V59 439 aaPredicted RBP25■■□□□ 1.59
CPSF7-204ENST00000413232 SP8Q8IXZ3 490 aa25■■□□□ 1.59
CPSF7-204ENST00000413232 RTFDC1Q9BY42 306 aaPredicted RBP25■■□□□ 1.59
CPSF7-204ENST00000413232 ELL2O00472 640 aaPredicted RBP24.99■■□□□ 1.59
CPSF7-204ENST00000413232 NIM1KQ8IY84 436 aa24.99■■□□□ 1.59
CPSF7-204ENST00000413232 CNTROBQ8N137 903 aa24.99■■□□□ 1.59
CPSF7-204ENST00000413232 FAM89AQ96GI7 184 aa24.99■■□□□ 1.59
CPSF7-204ENST00000413232 GRAPQ13588 217 aa24.98■■□□□ 1.59
CPSF7-204ENST00000413232 DDX46Q7L014 1031 aaKnown RBP24.98■■□□□ 1.59
CPSF7-204ENST00000413232 GRAPLQ8TC17 118 aaPredicted RBP24.98■■□□□ 1.59
CPSF7-204ENST00000413232 HYPKQ9NX55 129 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms