RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 CLEC11AQ9Y240 323 aa24.53■■□□□ 1.52
ITGA6-204ENST00000412899 IBTKQ9P2D0 1353 aaPredicted RBP24.53■■□□□ 1.52
ITGA6-204ENST00000412899 EPHX2P34913 555 aa24.52■■□□□ 1.52
ITGA6-204ENST00000412899 ZNF34Q8IZ26 560 aa24.52■■□□□ 1.52
ITGA6-204ENST00000412899 EIF2S2P20042 333 aaKnown RBP24.51■■□□□ 1.51
ITGA6-204ENST00000412899 RIPK4P57078 832 aa24.51■■□□□ 1.51
ITGA6-204ENST00000412899 PPP1R42Q7Z4L9 355 aa24.51■■□□□ 1.51
ITGA6-204ENST00000412899 RBM17Q96I25 401 aaKnown RBP24.51■■□□□ 1.51
ITGA6-204ENST00000412899 RNF123Q5XPI4 1314 aa24.51■■□□□ 1.51
ITGA6-204ENST00000412899 PASKQ96RG2 1323 aa24.51■■□□□ 1.51
ITGA6-204ENST00000412899 HOXA10P31260 410 aaPredicted RBP24.5■■□□□ 1.51
ITGA6-204ENST00000412899 PNMA8AQ86V59 439 aaPredicted RBP24.5■■□□□ 1.51
ITGA6-204ENST00000412899 GPC2Q8N158 579 aa24.5■■□□□ 1.51
ITGA6-204ENST00000412899 RIC1Q4ADV7 1423 aa24.5■■□□□ 1.51
ITGA6-204ENST00000412899 NTSR2O95665 410 aa24.49■■□□□ 1.51
ITGA6-204ENST00000412899 EIF6P56537 245 aaKnown RBP24.49■■□□□ 1.51
ITGA6-204ENST00000412899 GRIPAP1Q4V328 841 aa24.49■■□□□ 1.51
ITGA6-204ENST00000412899 PARP10Q53GL7 1025 aa24.49■■□□□ 1.51
ITGA6-204ENST00000412899 CRAMP1Q96RY5 1269 aa24.49■■□□□ 1.51
ITGA6-204ENST00000412899 TCERG1O14776 1098 aaKnown RBP24.48■■□□□ 1.51
ITGA6-204ENST00000412899 CAPN15O75808 1086 aa24.48■■□□□ 1.51
ITGA6-204ENST00000412899 ITGBL1O95965 494 aaPredicted RBP24.48■■□□□ 1.51
ITGA6-204ENST00000412899 SNED1Q8TER0 1413 aa24.48■■□□□ 1.51
ITGA6-204ENST00000412899 TMEM88BA6NKF7 163 aa24.47■■□□□ 1.51
ITGA6-204ENST00000412899 PPEF1O14829 653 aaPredicted RBP24.47■■□□□ 1.51
ITGA6-204ENST00000412899 RALBP1Q15311 655 aa24.47■■□□□ 1.51
ITGA6-204ENST00000412899 NLRP3Q96P20 1036 aa24.47■■□□□ 1.51
ITGA6-204ENST00000412899 GJA3Q9Y6H8 435 aa24.47■■□□□ 1.51
ITGA6-204ENST00000412899 CNTNAP1P78357 1384 aa24.46■■□□□ 1.51
ITGA6-204ENST00000412899 LMOD3Q0VAK6 560 aa24.46■■□□□ 1.51
ITGA6-204ENST00000412899 PDIA6Q15084 440 aa24.46■■□□□ 1.51
ITGA6-204ENST00000412899 LARGE2Q8N3Y3 721 aa24.46■■□□□ 1.51
ITGA6-204ENST00000412899 TMX4Q9H1E5 349 aaPredicted RBP24.46■■□□□ 1.51
ITGA6-204ENST00000412899 BABAM1Q9NWV8 329 aa24.46■■□□□ 1.51
ITGA6-204ENST00000412899 UTP14AQ9BVJ6 771 aaKnown RBP24.45■■□□□ 1.5
ITGA6-204ENST00000412899 ANXA1P04083 346 aa24.44■■□□□ 1.5
ITGA6-204ENST00000412899 LMOD1P29536 600 aaPredicted RBP24.44■■□□□ 1.5
ITGA6-204ENST00000412899 TMPOP42166 694 aaKnown RBP24.44■■□□□ 1.5
ITGA6-204ENST00000412899 MAP1SQ66K74 1059 aaPredicted RBP24.44■■□□□ 1.5
ITGA6-204ENST00000412899 C3orf67Q6ZVT6 689 aa24.44■■□□□ 1.5
ITGA6-204ENST00000412899 LRP10Q7Z4F1 713 aa24.44■■□□□ 1.5
ITGA6-204ENST00000412899 CNTROBQ8N137 903 aa24.44■■□□□ 1.5
ITGA6-204ENST00000412899 PROSER3Q2NL68 480 aa24.43■■□□□ 1.5
ITGA6-204ENST00000412899 NECTIN2Q92692 538 aa24.43■■□□□ 1.5
ITGA6-204ENST00000412899 AIMP1Q12904 312 aaKnown RBP24.42■■□□□ 1.5
ITGA6-204ENST00000412899 COL4A5P29400 1685 aa24.41■■□□□ 1.5
ITGA6-204ENST00000412899 NEUROD2Q15784 382 aa24.41■■□□□ 1.5
ITGA6-204ENST00000412899 SLC10A5Q5PT55 438 aa24.41■■□□□ 1.5
ITGA6-204ENST00000412899 COPS6Q7L5N1 327 aa24.41■■□□□ 1.5
ITGA6-204ENST00000412899 SLC51AQ86UW1 340 aa24.41■■□□□ 1.5
ITGA6-204ENST00000412899 NIM1KQ8IY84 436 aa24.41■■□□□ 1.5
ITGA6-204ENST00000412899 ADAMTSL1Q8N6G6 1762 aa24.41■■□□□ 1.5
ITGA6-204ENST00000412899 ZNF316A6NFI3 1004 aaPredicted RBP24.4■■□□□ 1.5
ITGA6-204ENST00000412899 PPIP5K2O43314 1243 aa24.4■■□□□ 1.5
ITGA6-204ENST00000412899 VEGFBP49765 207 aa24.4■■□□□ 1.5
ITGA6-204ENST00000412899 HSP90AB3PQ58FF7 597 aa24.4■■□□□ 1.5
ITGA6-204ENST00000412899 ATP6V0A2Q9Y487 856 aa24.4■■□□□ 1.5
ITGA6-204ENST00000412899 CCDC146Q8IYE0 955 aa24.39■■□□□ 1.49
ITGA6-204ENST00000412899 XAGE3Q8WTP9 111 aa24.39■■□□□ 1.49
ITGA6-204ENST00000412899 AOC3Q16853 763 aa24.38■■□□□ 1.49
ITGA6-204ENST00000412899 FOXN1O15353 648 aa24.37■■□□□ 1.49
ITGA6-204ENST00000412899 EPS15P42566 896 aa24.37■■□□□ 1.49
ITGA6-204ENST00000412899 SCNN1DP51172 638 aa24.37■■□□□ 1.49
ITGA6-204ENST00000412899 NLRP10Q86W26 655 aa24.37■■□□□ 1.49
ITGA6-204ENST00000412899 AIDAQ96BJ3 306 aa24.37■■□□□ 1.49
ITGA6-204ENST00000412899 LAS1LQ9Y4W2 734 aaKnown RBP24.37■■□□□ 1.49
ITGA6-204ENST00000412899 PCNTO95613 3336 aa24.37■■□□□ 1.49
ITGA6-204ENST00000412899 ABCC4O15439 1325 aa24.36■■□□□ 1.49
ITGA6-204ENST00000412899 MYBBP1AQ9BQG0 1328 aaKnown RBP24.36■■□□□ 1.49
ITGA6-204ENST00000412899 DEFB115Q30KQ5 88 aa24.36■■□□□ 1.49
ITGA6-204ENST00000412899 SUPT20HQ8NEM7 779 aa24.36■■□□□ 1.49
ITGA6-204ENST00000412899 VPS33BQ9H267 617 aa24.36■■□□□ 1.49
ITGA6-204ENST00000412899 DDX21Q9NR30 783 aaKnown RBP eCLIP24.36■■□□□ 1.49
ITGA6-204ENST00000412899 TRMT112Q9UI30 125 aaKnown RBP24.36■■□□□ 1.49
ITGA6-204ENST00000412899 BBOX1O75936 387 aa24.35■■□□□ 1.49
ITGA6-204ENST00000412899 HCLS1P14317 486 aaPredicted RBP24.35■■□□□ 1.49
ITGA6-204ENST00000412899 TCIRG1Q13488 830 aa24.35■■□□□ 1.49
ITGA6-204ENST00000412899 ABT1Q9ULW3 272 aaKnown RBP24.35■■□□□ 1.49
ITGA6-204ENST00000412899 RASSF10A6NK89 507 aa24.34■■□□□ 1.49
ITGA6-204ENST00000412899 CHL1O00533 1208 aa24.34■■□□□ 1.49
ITGA6-204ENST00000412899 WDR43Q15061 677 aaKnown RBP eCLIP24.34■■□□□ 1.49
ITGA6-204ENST00000412899 KRT24Q2M2I5 525 aa24.34■■□□□ 1.49
ITGA6-204ENST00000412899 USP50Q70EL3 339 aaPredicted RBP24.34■■□□□ 1.49
ITGA6-204ENST00000412899 LTBP1Q14766 1721 aa24.34■■□□□ 1.49
ITGA6-204ENST00000412899 DPP8Q6V1X1 898 aaPredicted RBP24.33■■□□□ 1.49
ITGA6-204ENST00000412899 DDX46Q7L014 1031 aaKnown RBP24.33■■□□□ 1.49
ITGA6-204ENST00000412899 SP8Q8IXZ3 490 aa24.33■■□□□ 1.49
ITGA6-204ENST00000412899 MPNDQ8N594 471 aa24.33■■□□□ 1.49
ITGA6-204ENST00000412899 RUNDC1Q96C34 613 aa24.33■■□□□ 1.49
ITGA6-204ENST00000412899 SH3TC1Q8TE82 1336 aa24.33■■□□□ 1.48
ITGA6-204ENST00000412899 CTCFP49711 727 aaPredicted RBP24.32■■□□□ 1.48
ITGA6-204ENST00000412899 RTFDC1Q9BY42 306 aaPredicted RBP24.32■■□□□ 1.48
ITGA6-204ENST00000412899 ZNRF3Q9ULT6 936 aa24.32■■□□□ 1.48
ITGA6-204ENST00000412899 ANKRD36CQ5JPF3 1778 aa24.31■■□□□ 1.48
ITGA6-204ENST00000412899 PRDM10Q9NQV6 1147 aa24.31■■□□□ 1.48
ITGA6-204ENST00000412899 CHPF2Q9P2E5 772 aa24.31■■□□□ 1.48
ITGA6-204ENST00000412899 TRIM35Q9UPQ4 493 aa24.31■■□□□ 1.48
ITGA6-204ENST00000412899 CXCL9Q07325 125 aa24.3■■□□□ 1.48
ITGA6-204ENST00000412899 HDGFL1Q5TGJ6 251 aa24.3■■□□□ 1.48
ITGA6-204ENST00000412899 ZNF428Q96B54 188 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms