RNA–Protein interactions for RNA: ENST00000411788.5

SEMA3C-202, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-202ENST00000411788 LARGE2Q8N3Y3 721 aa5.55□□□□□ -1.52
SEMA3C-202ENST00000411788 IPO9Q96P70 1041 aaKnown RBP5.55□□□□□ -1.52
SEMA3C-202ENST00000411788 GZF1Q9H116 711 aaPredicted RBP5.55□□□□□ -1.52
SEMA3C-202ENST00000411788 SEMA6BQ9H3T3 888 aa5.55□□□□□ -1.52
SEMA3C-202ENST00000411788 GGA1Q9UJY5 639 aa5.55□□□□□ -1.52
SEMA3C-202ENST00000411788 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 PLEKHD1A6NEE1 506 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 LETM1O95202 739 aaPredicted RBP5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 MYCP01106 439 aaPredicted RBP5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 GNRH1P01148 92 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 HOXB4P17483 251 aaPredicted RBP5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 PHKA2P46019 1235 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 SCTRP47872 440 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 CENPCQ03188 943 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 USP4Q13107 963 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 HSP90AB3PQ58FF7 597 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 GNASQ5JWF2 1037 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 ZMYM1Q5SVZ6 1142 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 ANKMY2Q8IV38 441 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 PHTF2Q8N3S3 785 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 CNKSR1Q969H4 720 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 BTBD6Q96KE9 485 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 ZSCAN10Q96SZ4 725 aaPredicted RBP5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 ESYT1Q9BSJ8 1104 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 OSBPL3Q9H4L5 887 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 GEMIN8Q9NWZ8 242 aaKnown RBP5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 GNEQ9Y223 722 aaKnown RBP5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 PCDHB11Q9Y5F2 797 aa5.54□□□□□ -1.52
SEMA3C-202ENST00000411788 FGFR3P22607 806 aa5.53□□□□□ -1.52
SEMA3C-202ENST00000411788 CHRNA4P43681 627 aa5.53□□□□□ -1.52
SEMA3C-202ENST00000411788 DMTNQ08495 405 aa5.53□□□□□ -1.52
SEMA3C-202ENST00000411788 PTK7Q13308 1070 aa5.53□□□□□ -1.52
SEMA3C-202ENST00000411788 UBAP2LQ14157 1087 aaKnown RBP5.53□□□□□ -1.52
SEMA3C-202ENST00000411788 CDCA8Q53HL2 280 aa5.53□□□□□ -1.52
SEMA3C-202ENST00000411788 DNTTIP2Q5QJE6 756 aaKnown RBP5.53□□□□□ -1.52
SEMA3C-202ENST00000411788 DEPDC4Q8N2C3 294 aa5.53□□□□□ -1.52
SEMA3C-202ENST00000411788 OGFOD1Q8N543 542 aa5.53□□□□□ -1.52
SEMA3C-202ENST00000411788 CLP1Q92989 425 aaKnown RBP5.53□□□□□ -1.52
SEMA3C-202ENST00000411788 GTPBP4Q9BZE4 634 aaKnown RBP5.53□□□□□ -1.52
SEMA3C-202ENST00000411788 DNAAF2Q9NVR5 837 aaKnown RBP5.53□□□□□ -1.52
SEMA3C-202ENST00000411788 C2CD2LO14523 706 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 ARAFP10398 606 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 EPXP11678 715 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 ARID4AP29374 1257 aaPredicted RBP5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 DGKGP49619 791 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 TERF1P54274 439 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 PSME1Q06323 249 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 DOC2BQ14184 412 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 NBPF9Q3BBW0 867 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 OXLD1Q5BKU9 147 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 TMEM164Q5U3C3 297 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 TMEM214Q6NUQ4 689 aaKnown RBP5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 SND1Q7KZF4 910 aaKnown RBP eCLIP5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 EGFL6Q8IUX8 553 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 SIX5Q8N196 739 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 ABHD17AQ96GS6 310 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 CARD10Q9BWT7 1032 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 RUBCNLQ9H714 662 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 RAB6BQ9NRW1 208 aa5.52□□□□□ -1.53
SEMA3C-202ENST00000411788 NRDCO43847 1150 aa5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 IL2RAP01589 272 aa5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 MSX1P28360 303 aa5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 SSR1P43307 286 aaKnown RBP5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 GATA4P43694 442 aa5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 MFAP1P55081 439 aaKnown RBP5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 SEC13P55735 322 aa5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 GTF2IP78347 998 aa5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 CRTC2Q53ET0 693 aaPredicted RBP5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 L1TD1Q5T7N2 865 aaKnown RBP5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 STK32AQ8WU08 396 aa5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 TSPYL1Q9H0U9 437 aa5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 ZMIZ1Q9ULJ6 1067 aa5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 IVNS1ABPQ9Y6Y0 642 aa5.51□□□□□ -1.53
SEMA3C-202ENST00000411788 BNIP3LO60238 219 aa5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 ERCC3P19447 782 aa5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 ITGB7P26010 798 aa5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 CTBSQ01459 385 aa5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 C4orf17Q53FE4 359 aa5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 ESCO1Q5FWF5 840 aa5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 FIGNL1Q6PIW4 674 aa5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 EXOC8Q8IYI6 725 aa5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 FAM177A1Q8N128 213 aaPredicted RBP5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 C1orf216Q8TAB5 229 aa5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 XAGE2Q96GT9 111 aa5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 NDFIP2Q9NV92 336 aa5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 RBM28Q9NW13 759 aaKnown RBP5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 BSDC1Q9NW68 430 aaPredicted RBP5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 RAI14Q9P0K7 980 aa5.5□□□□□ -1.53
SEMA3C-202ENST00000411788 SCO2A0A1W2PP80 73 aa5.49□□□□□ -1.53
SEMA3C-202ENST00000411788 NEURL1BA8MQ27 555 aa5.49□□□□□ -1.53
SEMA3C-202ENST00000411788 M0R2N6 131 aa5.49□□□□□ -1.53
SEMA3C-202ENST00000411788 ATP2B4P23634 1241 aa5.49□□□□□ -1.53
SEMA3C-202ENST00000411788 DPYDQ12882 1025 aa5.49□□□□□ -1.53
SEMA3C-202ENST00000411788 CHSY3Q70JA7 882 aa5.49□□□□□ -1.53
SEMA3C-202ENST00000411788 KRTAP1-3Q8IUG1 177 aa5.49□□□□□ -1.53
SEMA3C-202ENST00000411788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.49□□□□□ -1.53
SEMA3C-202ENST00000411788 OTUD6BQ8N6M0 293 aa5.49□□□□□ -1.53
SEMA3C-202ENST00000411788 ZNF594Q96JF6 807 aaPredicted RBP5.49□□□□□ -1.53
SEMA3C-202ENST00000411788 CRISPLD1Q9H336 500 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms