RNA–Protein interactions for RNA: ENST00000411788.5

SEMA3C-202, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-202ENST00000411788 AEBP2Q6ZN18 517 aaPredicted RBP18.11■□□□□ 0.49
SEMA3C-202ENST00000411788 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
SEMA3C-202ENST00000411788 SENP3Q9H4L4 574 aaPredicted RBP15.57■□□□□ 0.08
SEMA3C-202ENST00000411788 PHF23Q9BUL5 403 aaPredicted RBP15.3■□□□□ 0.04
SEMA3C-202ENST00000411788 FOXD1Q16676 465 aa14.48□□□□□ -0.09
SEMA3C-202ENST00000411788 MSH5O43196 834 aa13.71□□□□□ -0.21
SEMA3C-202ENST00000411788 POTEDQ86YR6 584 aa13.68□□□□□ -0.22
SEMA3C-202ENST00000411788 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
SEMA3C-202ENST00000411788 PIAS4Q8N2W9 510 aaPredicted RBP13.51□□□□□ -0.25
SEMA3C-202ENST00000411788 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
SEMA3C-202ENST00000411788 ADRA2BP18089 450 aa13.31□□□□□ -0.28
SEMA3C-202ENST00000411788 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
SEMA3C-202ENST00000411788 MAPK8IP2Q13387 824 aaPredicted RBP12.28□□□□□ -0.44
SEMA3C-202ENST00000411788 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
SEMA3C-202ENST00000411788 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
SEMA3C-202ENST00000411788 PPP4R3CPQ6ZMV5 832 aa11.83□□□□□ -0.52
SEMA3C-202ENST00000411788 DCAF8L1A6NGE4 600 aa11.82□□□□□ -0.52
SEMA3C-202ENST00000411788 HOXD11P31277 338 aaPredicted RBP11.75□□□□□ -0.53
SEMA3C-202ENST00000411788 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
SEMA3C-202ENST00000411788 RNF39Q9H2S5 420 aa11.63□□□□□ -0.55
SEMA3C-202ENST00000411788 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
SEMA3C-202ENST00000411788 C1QBPQ07021 282 aaKnown RBP11.49□□□□□ -0.57
SEMA3C-202ENST00000411788 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
SEMA3C-202ENST00000411788 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
SEMA3C-202ENST00000411788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEMA3C-202ENST00000411788 NPM3O75607 178 aaKnown RBP11.13□□□□□ -0.63
SEMA3C-202ENST00000411788 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
SEMA3C-202ENST00000411788 CAPN15O75808 1086 aa10.86□□□□□ -0.67
SEMA3C-202ENST00000411788 DSG3P32926 999 aa10.82□□□□□ -0.68
SEMA3C-202ENST00000411788 SPINK5Q9NQ38 1064 aaPredicted RBP10.81□□□□□ -0.68
SEMA3C-202ENST00000411788 APLP2Q06481 763 aa10.71□□□□□ -0.69
SEMA3C-202ENST00000411788 KCNA4P22459 653 aa10.7□□□□□ -0.7
SEMA3C-202ENST00000411788 POTEHQ6S545 545 aa10.7□□□□□ -0.7
SEMA3C-202ENST00000411788 SLC4A2P04920 1241 aa10.66□□□□□ -0.7
SEMA3C-202ENST00000411788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
SEMA3C-202ENST00000411788 TRHP20396 242 aaPredicted RBP10.63□□□□□ -0.71
SEMA3C-202ENST00000411788 HNRNPUL2Q1KMD3 747 aaKnown RBP10.63□□□□□ -0.71
SEMA3C-202ENST00000411788 ZNF219Q9P2Y4 722 aaPredicted RBP10.63□□□□□ -0.71
SEMA3C-202ENST00000411788 ABCB7O75027 752 aa10.55□□□□□ -0.72
SEMA3C-202ENST00000411788 SAMD1Q6SPF0 538 aaPredicted RBP10.53□□□□□ -0.72
SEMA3C-202ENST00000411788 RBM42Q9BTD8 480 aaKnown RBP10.39□□□□□ -0.75
SEMA3C-202ENST00000411788 MYCNP04198 464 aaPredicted RBP10.34□□□□□ -0.75
SEMA3C-202ENST00000411788 POLA2Q14181 598 aa10.28□□□□□ -0.76
SEMA3C-202ENST00000411788 CHRDL2Q6WN34 429 aa10.2□□□□□ -0.78
SEMA3C-202ENST00000411788 ZBTB12Q9Y330 459 aaPredicted RBP10.12□□□□□ -0.79
SEMA3C-202ENST00000411788 FOXD4L1Q9NU39 408 aa10.11□□□□□ -0.79
SEMA3C-202ENST00000411788 SLC4A1APQ9BWU0 796 aaKnown RBP10.1□□□□□ -0.79
SEMA3C-202ENST00000411788 AKT1S1Q96B36 256 aa10.08□□□□□ -0.8
SEMA3C-202ENST00000411788 ATF5Q9Y2D1 282 aaPredicted RBP10.04□□□□□ -0.8
SEMA3C-202ENST00000411788 REM2Q8IYK8 340 aaPredicted RBP9.96□□□□□ -0.82
SEMA3C-202ENST00000411788 OSCARQ8IYS5 282 aa9.94□□□□□ -0.82
SEMA3C-202ENST00000411788 SP7Q8TDD2 431 aaPredicted RBP9.94□□□□□ -0.82
SEMA3C-202ENST00000411788 PIP4P2Q8N4L2 257 aa9.9□□□□□ -0.82
SEMA3C-202ENST00000411788 PITPNM1O00562 1244 aa9.84□□□□□ -0.83
SEMA3C-202ENST00000411788 ATXN8OSP0DMR3 200 aa9.84□□□□□ -0.83
SEMA3C-202ENST00000411788 HAX1O00165 279 aa9.81□□□□□ -0.84
SEMA3C-202ENST00000411788 ZBTB22O15209 634 aa9.81□□□□□ -0.84
SEMA3C-202ENST00000411788 FXR2P51116 673 aaKnown RBP eCLIP9.81□□□□□ -0.84
SEMA3C-202ENST00000411788 SPDYE2BA6NHP3 402 aa9.76□□□□□ -0.85
SEMA3C-202ENST00000411788 SPDYE6P0CI01 402 aa9.76□□□□□ -0.85
SEMA3C-202ENST00000411788 FBLN2P98095 1184 aa9.76□□□□□ -0.85
SEMA3C-202ENST00000411788 SPDYE2Q495Y8 402 aa9.76□□□□□ -0.85
SEMA3C-202ENST00000411788 SPDYE1Q8NFV5 336 aaPredicted RBP9.64□□□□□ -0.87
SEMA3C-202ENST00000411788 CLEC11AQ9Y240 323 aa9.63□□□□□ -0.87
SEMA3C-202ENST00000411788 PRKAR2AP13861 404 aaKnown RBP9.61□□□□□ -0.87
SEMA3C-202ENST00000411788 ZNF692Q9BU19 519 aaPredicted RBP9.6□□□□□ -0.87
SEMA3C-202ENST00000411788 EVX2Q03828 476 aa9.59□□□□□ -0.87
SEMA3C-202ENST00000411788 MKRN4PQ13434 485 aaPredicted RBP9.57□□□□□ -0.88
SEMA3C-202ENST00000411788 SSUH2Q9Y2M2 353 aa9.57□□□□□ -0.88
SEMA3C-202ENST00000411788 C19orf67A6NJJ6 358 aa9.51□□□□□ -0.89
SEMA3C-202ENST00000411788 PRR29P0C7W0 189 aa9.46□□□□□ -0.9
SEMA3C-202ENST00000411788 CHADLQ6NUI6 762 aa9.43□□□□□ -0.9
SEMA3C-202ENST00000411788 PABPN1Q86U42 306 aaKnown RBP eCLIP9.43□□□□□ -0.9
SEMA3C-202ENST00000411788 GABBR2O75899 941 aa9.42□□□□□ -0.9
SEMA3C-202ENST00000411788 EHMT2Q96KQ7 1210 aa9.39□□□□□ -0.91
SEMA3C-202ENST00000411788 LHX8Q68G74 356 aa9.32□□□□□ -0.92
SEMA3C-202ENST00000411788 CD44P16070 742 aaKnown RBP9.3□□□□□ -0.92
SEMA3C-202ENST00000411788 FARP1Q9Y4F1 1045 aaPredicted RBP9.29□□□□□ -0.92
SEMA3C-202ENST00000411788 CLCN6P51797 869 aa9.28□□□□□ -0.92
SEMA3C-202ENST00000411788 CSRNP3Q8WYN3 585 aa9.19□□□□□ -0.94
SEMA3C-202ENST00000411788 STAG3Q9UJ98 1225 aa9.19□□□□□ -0.94
SEMA3C-202ENST00000411788 POTEIP0CG38 1075 aa9.18□□□□□ -0.94
SEMA3C-202ENST00000411788 DCBLD2Q96PD2 775 aa9.16□□□□□ -0.94
SEMA3C-202ENST00000411788 ZNF579Q8NAF0 562 aaKnown RBP9.14□□□□□ -0.95
SEMA3C-202ENST00000411788 ZRANB1Q9UGI0 708 aa9.13□□□□□ -0.95
SEMA3C-202ENST00000411788 CREBZFQ9NS37 354 aa9.12□□□□□ -0.95
SEMA3C-202ENST00000411788 SPDYE4A6NLX3 237 aa9.07□□□□□ -0.96
SEMA3C-202ENST00000411788 PAK3O75914 559 aaPredicted RBP9.07□□□□□ -0.96
SEMA3C-202ENST00000411788 NPM1P06748 294 aaKnown RBP eCLIP9.02□□□□□ -0.97
SEMA3C-202ENST00000411788 GALR2O43603 387 aaPredicted RBP9.01□□□□□ -0.97
SEMA3C-202ENST00000411788 PHF12Q96QT6 1004 aa8.95□□□□□ -0.98
SEMA3C-202ENST00000411788 MNX1P50219 401 aaPredicted RBP8.91□□□□□ -0.98
SEMA3C-202ENST00000411788 OTUD5Q96G74 571 aa8.9□□□□□ -0.98
SEMA3C-202ENST00000411788 PLSCR2Q9NRY7 297 aa8.9□□□□□ -0.98
SEMA3C-202ENST00000411788 POTEB2H3BUK9 544 aa8.87□□□□□ -0.99
SEMA3C-202ENST00000411788 PELP1Q8IZL8 1130 aaKnown RBP8.84□□□□□ -0.99
SEMA3C-202ENST00000411788 MS4A3Q96HJ5 214 aa8.84□□□□□ -0.99
SEMA3C-202ENST00000411788 ASTLQ6HA08 431 aaPredicted RBP8.83□□□□□ -1
SEMA3C-202ENST00000411788 SLC39A7Q92504 469 aa8.83□□□□□ -1
SEMA3C-202ENST00000411788 C7P10643 843 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms