RNA–Protein interactions for RNA: ENST00000409935.5

IMP4-203, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5 BASIC

Gene IMP4, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-203ENST00000409935 TRIM35Q9UPQ4 493 aa22.28■■□□□ 1.16
IMP4-203ENST00000409935 NUP98P52948 1817 aa22.27■■□□□ 1.16
IMP4-203ENST00000409935 EIF2S2P20042 333 aaKnown RBP22.27■■□□□ 1.16
IMP4-203ENST00000409935 PROSER3Q2NL68 480 aa22.27■■□□□ 1.16
IMP4-203ENST00000409935 PPP1R42Q7Z4L9 355 aa22.27■■□□□ 1.16
IMP4-203ENST00000409935 RUNDC1Q96C34 613 aa22.27■■□□□ 1.16
IMP4-203ENST00000409935 IARSP41252 1262 aaKnown RBP22.26■■□□□ 1.15
IMP4-203ENST00000409935 TAF1DQ9H5J8 278 aaPredicted RBP22.26■■□□□ 1.15
IMP4-203ENST00000409935 POTEIP0CG38 1075 aa22.25■■□□□ 1.15
IMP4-203ENST00000409935 POTEJP0CG39 1038 aa22.25■■□□□ 1.15
IMP4-203ENST00000409935 RPGRQ92834 1020 aaKnown RBP22.25■■□□□ 1.15
IMP4-203ENST00000409935 ADAMTS8Q9UP79 889 aa22.25■■□□□ 1.15
IMP4-203ENST00000409935 C3orf67Q6ZVT6 689 aa22.24■■□□□ 1.15
IMP4-203ENST00000409935 COPS6Q7L5N1 327 aa22.24■■□□□ 1.15
IMP4-203ENST00000409935 RBM17Q96I25 401 aaKnown RBP22.24■■□□□ 1.15
IMP4-203ENST00000409935 DDX21Q9NR30 783 aaKnown RBP eCLIP22.24■■□□□ 1.15
IMP4-203ENST00000409935 RNF123Q5XPI4 1314 aa22.24■■□□□ 1.15
IMP4-203ENST00000409935 ZNF541Q9H0D2 1346 aa22.24■■□□□ 1.15
IMP4-203ENST00000409935 LDHDQ86WU2 507 aa22.23■■□□□ 1.15
IMP4-203ENST00000409935 CCDC146Q8IYE0 955 aa22.23■■□□□ 1.15
IMP4-203ENST00000409935 NLRP3Q96P20 1036 aa22.23■■□□□ 1.15
IMP4-203ENST00000409935 UTP14AQ9BVJ6 771 aaKnown RBP22.23■■□□□ 1.15
IMP4-203ENST00000409935 CACNA1SQ13698 1873 aa22.22■■□□□ 1.15
IMP4-203ENST00000409935 ANXA1P04083 346 aa22.22■■□□□ 1.15
IMP4-203ENST00000409935 GPC2Q8N158 579 aa22.22■■□□□ 1.15
IMP4-203ENST00000409935 CREBZFQ9NS37 354 aa22.22■■□□□ 1.15
IMP4-203ENST00000409935 HOXB7P09629 217 aa22.21■■□□□ 1.15
IMP4-203ENST00000409935 TCIRG1Q13488 830 aa22.21■■□□□ 1.15
IMP4-203ENST00000409935 NEUROD2Q15784 382 aa22.21■■□□□ 1.15
IMP4-203ENST00000409935 HSP90AB3PQ58FF7 597 aa22.21■■□□□ 1.15
IMP4-203ENST00000409935 XAGE3Q8WTP9 111 aa22.21■■□□□ 1.15
IMP4-203ENST00000409935 PASKQ96RG2 1323 aa22.21■■□□□ 1.15
IMP4-203ENST00000409935 ITGBL1O95965 494 aaPredicted RBP22.2■■□□□ 1.14
IMP4-203ENST00000409935 WDR43Q15061 677 aaKnown RBP eCLIP22.2■■□□□ 1.14
IMP4-203ENST00000409935 KRT24Q2M2I5 525 aa22.2■■□□□ 1.14
IMP4-203ENST00000409935 NLRP10Q86W26 655 aa22.2■■□□□ 1.14
IMP4-203ENST00000409935 JDP2Q8WYK2 163 aa22.2■■□□□ 1.14
IMP4-203ENST00000409935 VPS33BQ9H267 617 aa22.2■■□□□ 1.14
IMP4-203ENST00000409935 PRKRIP1Q9H875 184 aaPredicted RBP22.2■■□□□ 1.14
IMP4-203ENST00000409935 HACL1Q9UJ83 578 aa22.2■■□□□ 1.14
IMP4-203ENST00000409935 CFAP44Q96MT7 982 aa22.19■■□□□ 1.14
IMP4-203ENST00000409935 ATP6V0A2Q9Y487 856 aa22.19■■□□□ 1.14
IMP4-203ENST00000409935 SCN4AP35499 1836 aa22.19■■□□□ 1.14
IMP4-203ENST00000409935 PPEF1O14829 653 aaPredicted RBP22.18■■□□□ 1.14
IMP4-203ENST00000409935 PNMA8AQ86V59 439 aaPredicted RBP22.18■■□□□ 1.14
IMP4-203ENST00000409935 BBOX1O75936 387 aa22.17■■□□□ 1.14
IMP4-203ENST00000409935 EPHX2P34913 555 aa22.17■■□□□ 1.14
IMP4-203ENST00000409935 AIMP1Q12904 312 aaKnown RBP22.17■■□□□ 1.14
IMP4-203ENST00000409935 NECTIN2Q92692 538 aa22.17■■□□□ 1.14
IMP4-203ENST00000409935 RTFDC1Q9BY42 306 aaPredicted RBP22.17■■□□□ 1.14
IMP4-203ENST00000409935 ZNF853P0CG23 659 aa22.16■■□□□ 1.14
IMP4-203ENST00000409935 SLC51AQ86UW1 340 aa22.16■■□□□ 1.14
IMP4-203ENST00000409935 COL4A5P29400 1685 aa22.16■■□□□ 1.14
IMP4-203ENST00000409935 PLBD2Q8NHP8 589 aa22.15■■□□□ 1.14
IMP4-203ENST00000409935 CHPF2Q9P2E5 772 aa22.15■■□□□ 1.14
IMP4-203ENST00000409935 DBF4Q9UBU7 674 aaPredicted RBP22.15■■□□□ 1.14
IMP4-203ENST00000409935 ABCC4O15439 1325 aa22.14■■□□□ 1.14
IMP4-203ENST00000409935 EIF6P56537 245 aaKnown RBP22.14■■□□□ 1.13
IMP4-203ENST00000409935 COL13A1Q5TAT6 717 aaPredicted RBP22.14■■□□□ 1.13
IMP4-203ENST00000409935 SP8Q8IXZ3 490 aa22.14■■□□□ 1.13
IMP4-203ENST00000409935 LARGE2Q8N3Y3 721 aa22.14■■□□□ 1.13
IMP4-203ENST00000409935 LAS1LQ9Y4W2 734 aaKnown RBP22.14■■□□□ 1.13
IMP4-203ENST00000409935 SH3TC1Q8TE82 1336 aa22.13■■□□□ 1.13
IMP4-203ENST00000409935 HCLS1P14317 486 aaPredicted RBP22.13■■□□□ 1.13
IMP4-203ENST00000409935 TRIM28Q13263 835 aaKnown RBP22.13■■□□□ 1.13
IMP4-203ENST00000409935 HDGFL1Q5TGJ6 251 aa22.13■■□□□ 1.13
IMP4-203ENST00000409935 ANKRD13DQ6ZTN6 518 aa22.13■■□□□ 1.13
IMP4-203ENST00000409935 ISCA1Q9BUE6 129 aa22.13■■□□□ 1.13
IMP4-203ENST00000409935 TRMT112Q9UI30 125 aaKnown RBP22.13■■□□□ 1.13
IMP4-203ENST00000409935 HYPKQ9NX55 129 aa22.12■■□□□ 1.13
IMP4-203ENST00000409935 ADAMTSL1Q8N6G6 1762 aa22.12■■□□□ 1.13
IMP4-203ENST00000409935 TCERG1O14776 1098 aaKnown RBP22.11■■□□□ 1.13
IMP4-203ENST00000409935 SCNN1DP51172 638 aa22.11■■□□□ 1.13
IMP4-203ENST00000409935 EAPPQ56P03 285 aaPredicted RBP22.11■■□□□ 1.13
IMP4-203ENST00000409935 DUSP27Q5VZP5 1158 aa22.11■■□□□ 1.13
IMP4-203ENST00000409935 CNTROBQ8N137 903 aa22.11■■□□□ 1.13
IMP4-203ENST00000409935 TMX4Q9H1E5 349 aaPredicted RBP22.11■■□□□ 1.13
IMP4-203ENST00000409935 MBIPQ9NS73 344 aa22.11■■□□□ 1.13
IMP4-203ENST00000409935 TMEM88BA6NKF7 163 aa22.1■■□□□ 1.13
IMP4-203ENST00000409935 SUPT20HQ8NEM7 779 aa22.1■■□□□ 1.13
IMP4-203ENST00000409935 CNTNAP1P78357 1384 aa22.1■■□□□ 1.13
IMP4-203ENST00000409935 HSPA1AP0DMV8 641 aaKnown RBP22.09■■□□□ 1.13
IMP4-203ENST00000409935 HSPA1BP0DMV9 641 aaKnown RBP22.09■■□□□ 1.13
IMP4-203ENST00000409935 GRAPQ13588 217 aa22.09■■□□□ 1.13
IMP4-203ENST00000409935 TMC4Q7Z404 712 aa22.09■■□□□ 1.13
IMP4-203ENST00000409935 NIM1KQ8IY84 436 aa22.09■■□□□ 1.13
IMP4-203ENST00000409935 GRAPLQ8TC17 118 aaPredicted RBP22.09■■□□□ 1.13
IMP4-203ENST00000409935 IFT57Q9NWB7 429 aa22.09■■□□□ 1.13
IMP4-203ENST00000409935 APAF1O14727 1248 aa22.08■■□□□ 1.13
IMP4-203ENST00000409935 PPIP5K2O43314 1243 aa22.08■■□□□ 1.13
IMP4-203ENST00000409935 EPS15P42566 896 aa22.08■■□□□ 1.13
IMP4-203ENST00000409935 SF3B3Q15393 1217 aaKnown RBP22.08■■□□□ 1.13
IMP4-203ENST00000409935 AOC3Q16853 763 aa22.08■■□□□ 1.13
IMP4-203ENST00000409935 DDX46Q7L014 1031 aaKnown RBP22.08■■□□□ 1.13
IMP4-203ENST00000409935 MKRN1Q9UHC7 482 aaKnown RBP22.08■■□□□ 1.13
IMP4-203ENST00000409935 ZNRF3Q9ULT6 936 aa22.08■■□□□ 1.13
IMP4-203ENST00000409935 CLEC11AQ9Y240 323 aa22.08■■□□□ 1.13
IMP4-203ENST00000409935 GJA3Q9Y6H8 435 aa22.08■■□□□ 1.13
IMP4-203ENST00000409935 MAP1SQ66K74 1059 aaPredicted RBP22.07■■□□□ 1.12
IMP4-203ENST00000409935 MPNDQ8N594 471 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms