RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 EIF2S2P20042 333 aaKnown RBP10.65□□□□□ -0.7
GIN1-201ENST00000399004 UNC5CLQ8IV45 518 aa10.65□□□□□ -0.7
GIN1-201ENST00000399004 NWD2Q9ULI1 1742 aa10.65□□□□□ -0.7
GIN1-201ENST00000399004 HSPA4P34932 840 aa10.65□□□□□ -0.7
GIN1-201ENST00000399004 NBPF6Q5VWK0 638 aa10.65□□□□□ -0.7
GIN1-201ENST00000399004 SASS6Q6UVJ0 657 aa10.65□□□□□ -0.7
GIN1-201ENST00000399004 NBPF4Q96M43 638 aa10.65□□□□□ -0.7
GIN1-201ENST00000399004 TTC14Q96N46 770 aa10.65□□□□□ -0.7
GIN1-201ENST00000399004 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.65□□□□□ -0.7
GIN1-201ENST00000399004 V9GYY5 206 aaPredicted RBP10.65□□□□□ -0.7
GIN1-201ENST00000399004 MCCP23508 829 aa10.65□□□□□ -0.71
GIN1-201ENST00000399004 MEGF6O75095 1541 aa10.65□□□□□ -0.71
GIN1-201ENST00000399004 MX1P20591 662 aa10.64□□□□□ -0.71
GIN1-201ENST00000399004 CEBPZQ03701 1054 aaKnown RBP10.64□□□□□ -0.71
GIN1-201ENST00000399004 CWC27Q6UX04 472 aaKnown RBP10.64□□□□□ -0.71
GIN1-201ENST00000399004 ANKLE2Q86XL3 938 aa10.64□□□□□ -0.71
GIN1-201ENST00000399004 CKAP2LQ8IYA6 745 aa10.64□□□□□ -0.71
GIN1-201ENST00000399004 NAP1L2Q9ULW6 460 aaPredicted RBP10.64□□□□□ -0.71
GIN1-201ENST00000399004 BRD1O95696 1058 aa10.64□□□□□ -0.71
GIN1-201ENST00000399004 ANXA1P04083 346 aa10.64□□□□□ -0.71
GIN1-201ENST00000399004 AMPHP49418 695 aa10.64□□□□□ -0.71
GIN1-201ENST00000399004 NGDNQ8NEJ9 315 aaKnown RBP10.64□□□□□ -0.71
GIN1-201ENST00000399004 PDLIM2Q96JY6 352 aa10.64□□□□□ -0.71
GIN1-201ENST00000399004 PHLPP1O60346 1717 aa10.64□□□□□ -0.71
GIN1-201ENST00000399004 NLRP6P59044 892 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 STK3Q13188 491 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 PDIA6Q15084 440 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 C16orf45Q96MC5 204 aaPredicted RBP10.63□□□□□ -0.71
GIN1-201ENST00000399004 MYH3P11055 1940 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 TNS3Q68CZ2 1445 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 ECM29Q5VYK3 1845 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 U2AF2P26368 475 aaKnown RBP eCLIP10.63□□□□□ -0.71
GIN1-201ENST00000399004 HS1BP3Q53T59 392 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 CCDC83Q8IWF9 413 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 RAD50Q92878 1312 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 RNMTO43148 476 aaKnown RBP10.63□□□□□ -0.71
GIN1-201ENST00000399004 CSPP1Q1MSJ5 1256 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 NECAB1Q8N987 351 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 SYAP1Q96A49 352 aaPredicted RBP10.63□□□□□ -0.71
GIN1-201ENST00000399004 STK31Q9BXU1 1019 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 IL25Q9H293 177 aa10.63□□□□□ -0.71
GIN1-201ENST00000399004 NAA30Q147X3 362 aaPredicted RBP10.62□□□□□ -0.71
GIN1-201ENST00000399004 NOLC1Q14978 699 aaKnown RBP eCLIP10.62□□□□□ -0.71
GIN1-201ENST00000399004 TRERF1Q96PN7 1200 aa10.62□□□□□ -0.71
GIN1-201ENST00000399004 C4AP0C0L4 1744 aa10.62□□□□□ -0.71
GIN1-201ENST00000399004 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
GIN1-201ENST00000399004 TCHHQ07283 1943 aa10.62□□□□□ -0.71
GIN1-201ENST00000399004 A0A087WWV3 80 aa10.62□□□□□ -0.71
GIN1-201ENST00000399004 LSG1Q9H089 658 aaKnown RBP10.62□□□□□ -0.71
GIN1-201ENST00000399004 GIGYF1O75420 1035 aaPredicted RBP10.61□□□□□ -0.71
GIN1-201ENST00000399004 MBD3O95983 291 aa10.61□□□□□ -0.71
GIN1-201ENST00000399004 SYTL4Q96C24 671 aaPredicted RBP10.61□□□□□ -0.71
GIN1-201ENST00000399004 TM6SF1Q9BZW5 370 aa10.61□□□□□ -0.71
GIN1-201ENST00000399004 TFIP11Q9UBB9 837 aaKnown RBP10.61□□□□□ -0.71
GIN1-201ENST00000399004 LRRFIP2Q9Y608 721 aaKnown RBP10.61□□□□□ -0.71
GIN1-201ENST00000399004 NRAPQ86VF7 1730 aa10.61□□□□□ -0.71
GIN1-201ENST00000399004 SGSM2O43147 1006 aa10.61□□□□□ -0.71
GIN1-201ENST00000399004 SURF6O75683 361 aaKnown RBP10.61□□□□□ -0.71
GIN1-201ENST00000399004 CHAF1AQ13111 956 aaPredicted RBP10.61□□□□□ -0.71
GIN1-201ENST00000399004 ZNF771Q7L3S4 317 aaPredicted RBP10.61□□□□□ -0.71
GIN1-201ENST00000399004 ERBB3P21860 1342 aa10.61□□□□□ -0.71
GIN1-201ENST00000399004 MED23Q9ULK4 1368 aa10.61□□□□□ -0.71
GIN1-201ENST00000399004 KIAA1551Q9HCM1 1747 aa10.6□□□□□ -0.71
GIN1-201ENST00000399004 GOLGA6L4A6NEF3 574 aa10.6□□□□□ -0.71
GIN1-201ENST00000399004 DNM1Q05193 864 aaKnown RBP10.6□□□□□ -0.71
GIN1-201ENST00000399004 TSGA10IPQ3SY00 556 aa10.6□□□□□ -0.71
GIN1-201ENST00000399004 ABTB2Q8N961 1025 aa10.6□□□□□ -0.71
GIN1-201ENST00000399004 SMC3Q9UQE7 1217 aa10.6□□□□□ -0.71
GIN1-201ENST00000399004 ROBO1Q9Y6N7 1651 aa10.6□□□□□ -0.71
GIN1-201ENST00000399004 KAZALD1Q96I82 304 aa10.6□□□□□ -0.71
GIN1-201ENST00000399004 BCORQ6W2J9 1755 aa10.6□□□□□ -0.71
GIN1-201ENST00000399004 DYNC1I1O14576 645 aa10.6□□□□□ -0.71
GIN1-201ENST00000399004 ATP2B3Q16720 1220 aa10.6□□□□□ -0.71
GIN1-201ENST00000399004 PYCARDQ9ULZ3 195 aa10.6□□□□□ -0.71
GIN1-201ENST00000399004 KIF3AQ9Y496 699 aa10.6□□□□□ -0.71
GIN1-201ENST00000399004 ZNF500O60304 480 aaPredicted RBP10.59□□□□□ -0.71
GIN1-201ENST00000399004 CASTP20810 708 aaKnown RBP10.59□□□□□ -0.71
GIN1-201ENST00000399004 LRMPQ12912 555 aa10.59□□□□□ -0.71
GIN1-201ENST00000399004 HSP90AB4PQ58FF6 505 aa10.59□□□□□ -0.71
GIN1-201ENST00000399004 DNAAF4Q8WXU2 420 aa10.59□□□□□ -0.71
GIN1-201ENST00000399004 KIF1BPQ96EK5 621 aa10.59□□□□□ -0.71
GIN1-201ENST00000399004 COL14A1Q05707 1796 aaKnown RBP10.59□□□□□ -0.71
GIN1-201ENST00000399004 ERICH4A6NGS2 130 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 PTGS1P23219 599 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 PLEKHO1Q53GL0 409 aaPredicted RBP10.58□□□□□ -0.72
GIN1-201ENST00000399004 PDCL2Q8N4E4 241 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 USHBP1Q8N6Y0 703 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 RHPN1Q8TCX5 695 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 PHAXQ9H814 394 aaKnown RBP10.58□□□□□ -0.72
GIN1-201ENST00000399004 DBF4Q9UBU7 674 aaPredicted RBP10.58□□□□□ -0.72
GIN1-201ENST00000399004 TIAM2Q8IVF5 1701 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 COL16A1Q07092 1604 aaPredicted RBP10.58□□□□□ -0.72
GIN1-201ENST00000399004 KDM4AO75164 1064 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 RABL6Q3YEC7 729 aaPredicted RBP10.58□□□□□ -0.72
GIN1-201ENST00000399004 KSR2Q6VAB6 950 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 LUZP1Q86V48 1076 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 LGR6Q9HBX8 967 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 PRDM4Q9UKN5 801 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 DCAF8L1A6NGE4 600 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 GCP02774 474 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms