RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 ZNF622Q969S3 477 aaKnown RBP eCLIP19.53■□□□□ 0.728e-7■■■□□ 15.4
SREBF1-203ENST00000395751 LZTFL1Q9NQ48 299 aa19.53■□□□□ 0.72
SREBF1-203ENST00000395751 TUBB2AQ13885 445 aa19.53■□□□□ 0.72
SREBF1-203ENST00000395751 TUBB2BQ9BVA1 445 aa19.53■□□□□ 0.72
SREBF1-203ENST00000395751 BOLA2Q9H3K6 86 aa19.53■□□□□ 0.72
SREBF1-203ENST00000395751 PYCARDQ9ULZ3 195 aa19.53■□□□□ 0.72
SREBF1-203ENST00000395751 JRKLQ9Y4A0 524 aa19.53■□□□□ 0.72
SREBF1-203ENST00000395751 ZMYM4Q5VZL5 1548 aa19.53■□□□□ 0.72
SREBF1-203ENST00000395751 ZNF569Q5MCW4 686 aa19.52■□□□□ 0.72
SREBF1-203ENST00000395751 GPR161Q8N6U8 529 aaKnown RBP19.52■□□□□ 0.72
SREBF1-203ENST00000395751 ZNF526Q8TF50 670 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-203ENST00000395751 LRCH2Q5VUJ6 765 aa19.52■□□□□ 0.72
SREBF1-203ENST00000395751 RRP15Q9Y3B9 282 aaKnown RBP19.52■□□□□ 0.72
SREBF1-203ENST00000395751 N4BP3O15049 544 aa19.52■□□□□ 0.72
SREBF1-203ENST00000395751 ARHGAP25P42331 645 aa19.52■□□□□ 0.72
SREBF1-203ENST00000395751 ABCC5O15440 1437 aa19.52■□□□□ 0.71
SREBF1-203ENST00000395751 CCDC158Q5M9N0 1113 aa19.52■□□□□ 0.71
SREBF1-203ENST00000395751 ATP2B3Q16720 1220 aa19.51■□□□□ 0.71
SREBF1-203ENST00000395751 ANKS4BQ8N8V4 417 aa19.51■□□□□ 0.71
SREBF1-203ENST00000395751 POLR3DP05423 398 aaPredicted RBP19.51■□□□□ 0.71
SREBF1-203ENST00000395751 CCDC172P0C7W6 258 aa19.51■□□□□ 0.71
SREBF1-203ENST00000395751 LRMPQ12912 555 aa19.51■□□□□ 0.71
SREBF1-203ENST00000395751 CCDC50Q8IVM0 306 aa19.51■□□□□ 0.71
SREBF1-203ENST00000395751 NEK1Q96PY6 1258 aa19.51■□□□□ 0.71
SREBF1-203ENST00000395751 KANK3Q6NY19 840 aa19.51■□□□□ 0.71
SREBF1-203ENST00000395751 PAIP2Q9BPZ3 127 aaKnown RBP19.51■□□□□ 0.71
SREBF1-203ENST00000395751 CABP1Q9NZU7 370 aa19.51■□□□□ 0.71
SREBF1-203ENST00000395751 DNA2P51530 1060 aa19.51■□□□□ 0.71
SREBF1-203ENST00000395751 HNRNPH2P55795 449 aaKnown RBP19.51■□□□□ 0.71
SREBF1-203ENST00000395751 CTAGE1Q96RT6 745 aa19.51■□□□□ 0.71
SREBF1-203ENST00000395751 BAG1Q99933 345 aaPredicted RBP19.51■□□□□ 0.71
SREBF1-203ENST00000395751 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.51■□□□□ 0.712e-7■■■□□ 17.3
SREBF1-203ENST00000395751 KIF5BP33176 963 aa19.5■□□□□ 0.71
SREBF1-203ENST00000395751 CLSTN2Q9H4D0 955 aa19.5■□□□□ 0.71
SREBF1-203ENST00000395751 RAD50Q92878 1312 aa19.5■□□□□ 0.71
SREBF1-203ENST00000395751 CCDC178Q5BJE1 867 aa19.5■□□□□ 0.71
SREBF1-203ENST00000395751 BRF1Q92994 677 aa19.5■□□□□ 0.71
SREBF1-203ENST00000395751 PTPRKQ15262 1439 aa19.5■□□□□ 0.71
SREBF1-203ENST00000395751 NEBLO76041 1014 aa19.49■□□□□ 0.71
SREBF1-203ENST00000395751 RPAINQ86UA6 219 aa19.49■□□□□ 0.71
SREBF1-203ENST00000395751 PTPRGP23470 1445 aa19.49■□□□□ 0.71
SREBF1-203ENST00000395751 ATP8B1O43520 1251 aa19.49■□□□□ 0.71
SREBF1-203ENST00000395751 BRD3Q15059 726 aa19.49■□□□□ 0.71
SREBF1-203ENST00000395751 ANKRD18AQ8IVF6 992 aa19.49■□□□□ 0.71
SREBF1-203ENST00000395751 ANKRD62A6NC57 917 aa19.49■□□□□ 0.71
SREBF1-203ENST00000395751 HSP90AA4PQ58FG1 418 aa19.49■□□□□ 0.71
SREBF1-203ENST00000395751 RTL1A6NKG5 1358 aa19.49■□□□□ 0.71
SREBF1-203ENST00000395751 CACNA2D4Q7Z3S7 1137 aa19.48■□□□□ 0.71
SREBF1-203ENST00000395751 GOLGA6CA6NDK9 693 aa19.48■□□□□ 0.71
SREBF1-203ENST00000395751 SSBP05455 408 aaKnown RBP eCLIP19.48■□□□□ 0.71
SREBF1-203ENST00000395751 GOLGA6DP0CG33 693 aa19.48■□□□□ 0.71
SREBF1-203ENST00000395751 CYLC1P35663 651 aaPredicted RBP19.48■□□□□ 0.71
SREBF1-203ENST00000395751 ICE2Q659A1 982 aa19.48■□□□□ 0.71
SREBF1-203ENST00000395751 GOLGA6AQ9NYA3 693 aa19.48■□□□□ 0.71
SREBF1-203ENST00000395751 PIK3C2GO75747 1445 aa19.48■□□□□ 0.71
SREBF1-203ENST00000395751 TROQ12816 1431 aaPredicted RBP19.48■□□□□ 0.71
SREBF1-203ENST00000395751 CPLX4Q7Z7G2 160 aa19.48■□□□□ 0.71
SREBF1-203ENST00000395751 MEIS3Q99687 375 aa19.48■□□□□ 0.71
SREBF1-203ENST00000395751 GOPCQ9HD26 462 aa19.48■□□□□ 0.71
SREBF1-203ENST00000395751 ORC3Q9UBD5 711 aaPredicted RBP19.48■□□□□ 0.71
SREBF1-203ENST00000395751 POLR3AO14802 1390 aaPredicted RBP19.47■□□□□ 0.71
SREBF1-203ENST00000395751 ASXL1Q8IXJ9 1541 aa19.47■□□□□ 0.71
SREBF1-203ENST00000395751 NUP133Q8WUM0 1156 aa19.47■□□□□ 0.71
SREBF1-203ENST00000395751 NSRP1Q9H0G5 558 aaKnown RBP19.47■□□□□ 0.71
SREBF1-203ENST00000395751 DDX41Q9UJV9 622 aaKnown RBP19.47■□□□□ 0.71
SREBF1-203ENST00000395751 EFCAB8A8MWE9 144 aa19.46■□□□□ 0.71
SREBF1-203ENST00000395751 VAV2P52735 878 aa19.46■□□□□ 0.71
SREBF1-203ENST00000395751 PKP1Q13835 747 aa19.46■□□□□ 0.71
SREBF1-203ENST00000395751 MRPL50Q8N5N7 158 aaKnown RBP19.46■□□□□ 0.71
SREBF1-203ENST00000395751 MBIPQ9NS73 344 aa19.46■□□□□ 0.71
SREBF1-203ENST00000395751 TCEANC2Q96MN5 208 aa19.46■□□□□ 0.71
SREBF1-203ENST00000395751 PRAM1Q96QH2 718 aa19.46■□□□□ 0.71
SREBF1-203ENST00000395751 CHMLP26374 656 aa19.46■□□□□ 0.71
SREBF1-203ENST00000395751 TTC39AQ5SRH9 613 aa19.46■□□□□ 0.71
SREBF1-203ENST00000395751 ACTN2P35609 894 aa19.46■□□□□ 0.71
SREBF1-203ENST00000395751 ETF1P62495 437 aaKnown RBP19.46■□□□□ 0.71
SREBF1-203ENST00000395751 SPAG1Q07617 926 aa19.46■□□□□ 0.71
SREBF1-203ENST00000395751 CCDC57Q2TAC2 916 aa19.45■□□□□ 0.7
SREBF1-203ENST00000395751 RPGRIP1LQ68CZ1 1315 aa19.45■□□□□ 0.7
SREBF1-203ENST00000395751 ARHGAP6O43182 974 aa19.45■□□□□ 0.7
SREBF1-203ENST00000395751 KRT86O43790 486 aa19.45■□□□□ 0.7
SREBF1-203ENST00000395751 RBM8AQ9Y5S9 174 aaKnown RBP19.45■□□□□ 0.7
SREBF1-203ENST00000395751 PDLIM2Q96JY6 352 aa19.45■□□□□ 0.7
SREBF1-203ENST00000395751 FAM160A1Q05DH4 1040 aa19.45■□□□□ 0.7
SREBF1-203ENST00000395751 TDRD12Q587J7 1177 aaKnown RBP19.45■□□□□ 0.7
SREBF1-203ENST00000395751 MEX3CQ5U5Q3 659 aaKnown RBP19.45■□□□□ 0.7
SREBF1-203ENST00000395751 MCM10Q7L590 875 aa19.45■□□□□ 0.7
SREBF1-203ENST00000395751 MYL5Q02045 173 aa19.44■□□□□ 0.7
SREBF1-203ENST00000395751 CCDC6Q16204 474 aa19.44■□□□□ 0.7
SREBF1-203ENST00000395751 CFAP58Q5T655 872 aa19.44■□□□□ 0.7
SREBF1-203ENST00000395751 BLMP54132 1417 aaPredicted RBP19.44■□□□□ 0.7
SREBF1-203ENST00000395751 GOLGA8BA8MQT2 603 aa19.44■□□□□ 0.7
SREBF1-203ENST00000395751 PHAXQ9H814 394 aaKnown RBP19.44■□□□□ 0.7
SREBF1-203ENST00000395751 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
SREBF1-203ENST00000395751 UBAC1Q9BSL1 405 aa19.44■□□□□ 0.7
SREBF1-203ENST00000395751 NACAP1Q9BZK3 213 aa19.44■□□□□ 0.7
SREBF1-203ENST00000395751 ZBTB7BO15156 539 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-203ENST00000395751 ZSCAN20P17040 1043 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-203ENST00000395751 IRX5P78411 483 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-203ENST00000395751 FKBP4Q02790 459 aaKnown RBP eCLIP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms