RNA–Protein interactions for RNA: ENST00000390601.3

IGHV3-11-201, Transcript of immunoglobulin heavy variable 3-11 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGHV3-11, Length 473 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-11-201ENST00000390601 EIF2S2P20042 333 aaKnown RBP16.48■□□□□ 0.23
IGHV3-11-201ENST00000390601 EIF6P56537 245 aaKnown RBP16.48■□□□□ 0.23
IGHV3-11-201ENST00000390601 HSP90AB3PQ58FF7 597 aa16.48■□□□□ 0.23
IGHV3-11-201ENST00000390601 SUSD4Q5VX71 490 aa16.48■□□□□ 0.23
IGHV3-11-201ENST00000390601 GPC2Q8N158 579 aa16.48■□□□□ 0.23
IGHV3-11-201ENST00000390601 RNF123Q5XPI4 1314 aa16.47■□□□□ 0.23
IGHV3-11-201ENST00000390601 TMPOP42166 694 aaKnown RBP16.47■□□□□ 0.23
IGHV3-11-201ENST00000390601 UTP14AQ9BVJ6 771 aaKnown RBP16.47■□□□□ 0.23
IGHV3-11-201ENST00000390601 CLEC11AQ9Y240 323 aa16.47■□□□□ 0.23
IGHV3-11-201ENST00000390601 ABCC12Q96J65 1359 aa16.47■□□□□ 0.23
IGHV3-11-201ENST00000390601 UBN2Q6ZU65 1347 aa16.46■□□□□ 0.23
IGHV3-11-201ENST00000390601 EPHX2P34913 555 aa16.46■□□□□ 0.23
IGHV3-11-201ENST00000390601 EAPPQ56P03 285 aaPredicted RBP16.46■□□□□ 0.23
IGHV3-11-201ENST00000390601 SLC10A5Q5PT55 438 aa16.46■□□□□ 0.23
IGHV3-11-201ENST00000390601 OLFM4Q6UX06 510 aa16.46■□□□□ 0.23
IGHV3-11-201ENST00000390601 VPS33BQ9H267 617 aa16.46■□□□□ 0.23
IGHV3-11-201ENST00000390601 NUP98P52948 1817 aa16.46■□□□□ 0.23
IGHV3-11-201ENST00000390601 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
IGHV3-11-201ENST00000390601 PPEF1O14829 653 aaPredicted RBP16.45■□□□□ 0.22
IGHV3-11-201ENST00000390601 NTSR2O95665 410 aa16.45■□□□□ 0.22
IGHV3-11-201ENST00000390601 POTEIP0CG38 1075 aa16.45■□□□□ 0.22
IGHV3-11-201ENST00000390601 POTEJP0CG39 1038 aa16.45■□□□□ 0.22
IGHV3-11-201ENST00000390601 HSPA1AP0DMV8 641 aaKnown RBP16.45■□□□□ 0.22
IGHV3-11-201ENST00000390601 HSPA1BP0DMV9 641 aaKnown RBP16.45■□□□□ 0.22
IGHV3-11-201ENST00000390601 PASKQ96RG2 1323 aa16.45■□□□□ 0.22
IGHV3-11-201ENST00000390601 MYBBP1AQ9BQG0 1328 aaKnown RBP16.45■□□□□ 0.22
IGHV3-11-201ENST00000390601 LMOD1P29536 600 aaPredicted RBP16.44■□□□□ 0.22
IGHV3-11-201ENST00000390601 WDR43Q15061 677 aaKnown RBP eCLIP16.44■□□□□ 0.22
IGHV3-11-201ENST00000390601 PDIA6Q15084 440 aa16.44■□□□□ 0.22
IGHV3-11-201ENST00000390601 COL13A1Q5TAT6 717 aaPredicted RBP16.44■□□□□ 0.22
IGHV3-11-201ENST00000390601 LARGE2Q8N3Y3 721 aa16.44■□□□□ 0.22
IGHV3-11-201ENST00000390601 TMEM88BA6NKF7 163 aa16.43■□□□□ 0.22
IGHV3-11-201ENST00000390601 BBOX1O75936 387 aa16.43■□□□□ 0.22
IGHV3-11-201ENST00000390601 LRP10Q7Z4F1 713 aa16.43■□□□□ 0.22
IGHV3-11-201ENST00000390601 TNS4Q8IZW8 715 aa16.43■□□□□ 0.22
IGHV3-11-201ENST00000390601 SUPT20HQ8NEM7 779 aa16.43■□□□□ 0.22
IGHV3-11-201ENST00000390601 RUNDC1Q96C34 613 aa16.43■□□□□ 0.22
IGHV3-11-201ENST00000390601 CHL1O00533 1208 aa16.42■□□□□ 0.22
IGHV3-11-201ENST00000390601 ITGBL1O95965 494 aaPredicted RBP16.42■□□□□ 0.22
IGHV3-11-201ENST00000390601 COPS6Q7L5N1 327 aa16.42■□□□□ 0.22
IGHV3-11-201ENST00000390601 NIM1KQ8IY84 436 aa16.42■□□□□ 0.22
IGHV3-11-201ENST00000390601 CNTROBQ8N137 903 aa16.42■□□□□ 0.22
IGHV3-11-201ENST00000390601 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
IGHV3-11-201ENST00000390601 MKRN1Q9UHC7 482 aaKnown RBP16.42■□□□□ 0.22
IGHV3-11-201ENST00000390601 ATP6V0A2Q9Y487 856 aa16.42■□□□□ 0.22
IGHV3-11-201ENST00000390601 HOXB7P09629 217 aa16.41■□□□□ 0.22
IGHV3-11-201ENST00000390601 DDX10Q13206 875 aaKnown RBP16.41■□□□□ 0.22
IGHV3-11-201ENST00000390601 TCIRG1Q13488 830 aa16.41■□□□□ 0.22
IGHV3-11-201ENST00000390601 NEUROD2Q15784 382 aa16.41■□□□□ 0.22
IGHV3-11-201ENST00000390601 GJA3Q9Y6H8 435 aa16.41■□□□□ 0.22
IGHV3-11-201ENST00000390601 SNED1Q8TER0 1413 aa16.41■□□□□ 0.22
IGHV3-11-201ENST00000390601 CNTNAP1P78357 1384 aa16.4■□□□□ 0.22
IGHV3-11-201ENST00000390601 AIMP1Q12904 312 aaKnown RBP16.4■□□□□ 0.22
IGHV3-11-201ENST00000390601 DDX46Q7L014 1031 aaKnown RBP16.4■□□□□ 0.22
IGHV3-11-201ENST00000390601 XAGE3Q8WTP9 111 aa16.4■□□□□ 0.22
IGHV3-11-201ENST00000390601 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
IGHV3-11-201ENST00000390601 PPIP5K2O43314 1243 aa16.39■□□□□ 0.21
IGHV3-11-201ENST00000390601 PROSER3Q2NL68 480 aa16.39■□□□□ 0.21
IGHV3-11-201ENST00000390601 USP50Q70EL3 339 aaPredicted RBP16.39■□□□□ 0.21
IGHV3-11-201ENST00000390601 TMC4Q7Z404 712 aa16.39■□□□□ 0.21
IGHV3-11-201ENST00000390601 NLRP10Q86W26 655 aa16.39■□□□□ 0.21
IGHV3-11-201ENST00000390601 SP8Q8IXZ3 490 aa16.39■□□□□ 0.21
IGHV3-11-201ENST00000390601 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
IGHV3-11-201ENST00000390601 ANXA1P04083 346 aa16.38■□□□□ 0.21
IGHV3-11-201ENST00000390601 CCDC146Q8IYE0 955 aa16.38■□□□□ 0.21
IGHV3-11-201ENST00000390601 NECTIN2Q92692 538 aa16.38■□□□□ 0.21
IGHV3-11-201ENST00000390601 AIDAQ96BJ3 306 aa16.38■□□□□ 0.21
IGHV3-11-201ENST00000390601 RTFDC1Q9BY42 306 aaPredicted RBP16.38■□□□□ 0.21
IGHV3-11-201ENST00000390601 LAS1LQ9Y4W2 734 aaKnown RBP16.38■□□□□ 0.21
IGHV3-11-201ENST00000390601 SH3TC1Q8TE82 1336 aa16.38■□□□□ 0.21
IGHV3-11-201ENST00000390601 HDGFL1Q5TGJ6 251 aa16.37■□□□□ 0.21
IGHV3-11-201ENST00000390601 MAP1SQ66K74 1059 aaPredicted RBP16.37■□□□□ 0.21
IGHV3-11-201ENST00000390601 DPP8Q6V1X1 898 aaPredicted RBP16.37■□□□□ 0.21
IGHV3-11-201ENST00000390601 C3orf67Q6ZVT6 689 aa16.37■□□□□ 0.21
IGHV3-11-201ENST00000390601 MPNDQ8N594 471 aa16.37■□□□□ 0.21
IGHV3-11-201ENST00000390601 PLBD2Q8NHP8 589 aa16.37■□□□□ 0.21
IGHV3-11-201ENST00000390601 DBF4Q9UBU7 674 aaPredicted RBP16.37■□□□□ 0.21
IGHV3-11-201ENST00000390601 ZNRF3Q9ULT6 936 aa16.37■□□□□ 0.21
IGHV3-11-201ENST00000390601 ABCC4O15439 1325 aa16.37■□□□□ 0.21
IGHV3-11-201ENST00000390601 DEFB115Q30KQ5 88 aa16.36■□□□□ 0.21
IGHV3-11-201ENST00000390601 ANKRD13DQ6ZTN6 518 aa16.36■□□□□ 0.21
IGHV3-11-201ENST00000390601 CFAP44Q96MT7 982 aa16.36■□□□□ 0.21
IGHV3-11-201ENST00000390601 CHMP4AQ9BY43 222 aa16.36■□□□□ 0.21
IGHV3-11-201ENST00000390601 TRIM35Q9UPQ4 493 aa16.36■□□□□ 0.21
IGHV3-11-201ENST00000390601 RASSF10A6NK89 507 aa16.35■□□□□ 0.21
IGHV3-11-201ENST00000390601 HCLS1P14317 486 aaPredicted RBP16.35■□□□□ 0.21
IGHV3-11-201ENST00000390601 HSP90B1P14625 803 aaKnown RBP16.35■□□□□ 0.21
IGHV3-11-201ENST00000390601 SCNN1DP51172 638 aa16.35■□□□□ 0.21
IGHV3-11-201ENST00000390601 CALD1Q05682 793 aaKnown RBP16.35■□□□□ 0.21
IGHV3-11-201ENST00000390601 GRAPQ13588 217 aa16.35■□□□□ 0.21
IGHV3-11-201ENST00000390601 AOC3Q16853 763 aa16.35■□□□□ 0.21
IGHV3-11-201ENST00000390601 GRAPLQ8TC17 118 aaPredicted RBP16.35■□□□□ 0.21
IGHV3-11-201ENST00000390601 HYPKQ9NX55 129 aa16.35■□□□□ 0.21
IGHV3-11-201ENST00000390601 ADAMTS8Q9UP79 889 aa16.35■□□□□ 0.21
IGHV3-11-201ENST00000390601 EPS15P42566 896 aa16.34■□□□□ 0.21
IGHV3-11-201ENST00000390601 VEGFBP49765 207 aa16.34■□□□□ 0.21
IGHV3-11-201ENST00000390601 TNIP1Q15025 636 aa16.34■□□□□ 0.21
IGHV3-11-201ENST00000390601 PRDM10Q9NQV6 1147 aa16.34■□□□□ 0.21
IGHV3-11-201ENST00000390601 ADARB2Q9NS39 739 aaKnown RBP16.34■□□□□ 0.21
IGHV3-11-201ENST00000390601 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms