RNA–Protein interactions for RNA: ENST00000380150.2

CDKN2A-202, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-202ENST00000380150 GIGYF2Q6Y7W6 1299 aaKnown RBP26.58■■□□□ 1.85
CDKN2A-202ENST00000380150 PNNQ9H307 717 aaKnown RBP26.58■■□□□ 1.85
CDKN2A-202ENST00000380150 RNF123Q5XPI4 1314 aa26.58■■□□□ 1.85
CDKN2A-202ENST00000380150 TCERG1O14776 1098 aaKnown RBP26.57■■□□□ 1.84
CDKN2A-202ENST00000380150 HOXA10P31260 410 aaPredicted RBP26.57■■□□□ 1.84
CDKN2A-202ENST00000380150 LDHDQ86WU2 507 aa26.57■■□□□ 1.84
CDKN2A-202ENST00000380150 RPGRQ92834 1020 aaKnown RBP26.57■■□□□ 1.84
CDKN2A-202ENST00000380150 CREBZFQ9NS37 354 aa26.57■■□□□ 1.84
CDKN2A-202ENST00000380150 PASKQ96RG2 1323 aa26.57■■□□□ 1.84
CDKN2A-202ENST00000380150 IBTKQ9P2D0 1353 aaPredicted RBP26.57■■□□□ 1.84
CDKN2A-202ENST00000380150 NECTIN2Q92692 538 aa26.56■■□□□ 1.84
CDKN2A-202ENST00000380150 PSMD1Q99460 953 aa26.56■■□□□ 1.84
CDKN2A-202ENST00000380150 RIC1Q4ADV7 1423 aa26.56■■□□□ 1.84
CDKN2A-202ENST00000380150 TMPOP42166 694 aaKnown RBP26.55■■□□□ 1.84
CDKN2A-202ENST00000380150 HACL1Q9UJ83 578 aa26.55■■□□□ 1.84
CDKN2A-202ENST00000380150 ERBB4Q15303 1308 aa26.55■■□□□ 1.84
CDKN2A-202ENST00000380150 ITGBL1O95965 494 aaPredicted RBP26.54■■□□□ 1.84
CDKN2A-202ENST00000380150 EPHX2P34913 555 aa26.54■■□□□ 1.84
CDKN2A-202ENST00000380150 CCDC146Q8IYE0 955 aa26.54■■□□□ 1.84
CDKN2A-202ENST00000380150 ADAMTSL1Q8N6G6 1762 aa26.53■■□□□ 1.84
CDKN2A-202ENST00000380150 KRT24Q2M2I5 525 aa26.53■■□□□ 1.84
CDKN2A-202ENST00000380150 RALBP1Q15311 655 aa26.52■■□□□ 1.84
CDKN2A-202ENST00000380150 PPEF1O14829 653 aaPredicted RBP26.51■■□□□ 1.83
CDKN2A-202ENST00000380150 NEUROD2Q15784 382 aa26.51■■□□□ 1.83
CDKN2A-202ENST00000380150 RBM17Q96I25 401 aaKnown RBP26.51■■□□□ 1.83
CDKN2A-202ENST00000380150 CRAMP1Q96RY5 1269 aa26.51■■□□□ 1.83
CDKN2A-202ENST00000380150 CLEC11AQ9Y240 323 aa26.51■■□□□ 1.83
CDKN2A-202ENST00000380150 LTBP1Q14766 1721 aa26.51■■□□□ 1.83
CDKN2A-202ENST00000380150 DDX10Q13206 875 aaKnown RBP26.5■■□□□ 1.83
CDKN2A-202ENST00000380150 MAP1SQ66K74 1059 aaPredicted RBP26.5■■□□□ 1.83
CDKN2A-202ENST00000380150 PPP1R42Q7Z4L9 355 aa26.5■■□□□ 1.83
CDKN2A-202ENST00000380150 GPC2Q8N158 579 aa26.5■■□□□ 1.83
CDKN2A-202ENST00000380150 JDP2Q8WYK2 163 aa26.5■■□□□ 1.83
CDKN2A-202ENST00000380150 ZNF428Q96B54 188 aa26.5■■□□□ 1.83
CDKN2A-202ENST00000380150 GJA3Q9Y6H8 435 aa26.5■■□□□ 1.83
CDKN2A-202ENST00000380150 CAPN15O75808 1086 aa26.49■■□□□ 1.83
CDKN2A-202ENST00000380150 AIMP1Q12904 312 aaKnown RBP26.49■■□□□ 1.83
CDKN2A-202ENST00000380150 CC2D2BQ6DHV5 1058 aa26.49■■□□□ 1.83
CDKN2A-202ENST00000380150 TNS4Q8IZW8 715 aa26.49■■□□□ 1.83
CDKN2A-202ENST00000380150 CNTNAP1P78357 1384 aa26.48■■□□□ 1.83
CDKN2A-202ENST00000380150 PARP10Q53GL7 1025 aa26.48■■□□□ 1.83
CDKN2A-202ENST00000380150 COPS6Q7L5N1 327 aa26.48■■□□□ 1.83
CDKN2A-202ENST00000380150 XAGE3Q8WTP9 111 aa26.48■■□□□ 1.83
CDKN2A-202ENST00000380150 UTP14AQ9BVJ6 771 aaKnown RBP26.48■■□□□ 1.83
CDKN2A-202ENST00000380150 LARGE2Q8N3Y3 721 aa26.47■■□□□ 1.83
CDKN2A-202ENST00000380150 NLRP3Q96P20 1036 aa26.47■■□□□ 1.83
CDKN2A-202ENST00000380150 SLC10A5Q5PT55 438 aa26.46■■□□□ 1.83
CDKN2A-202ENST00000380150 BABAM1Q9NWV8 329 aa26.46■■□□□ 1.83
CDKN2A-202ENST00000380150 TRIM35Q9UPQ4 493 aa26.46■■□□□ 1.83
CDKN2A-202ENST00000380150 ABCC4O15439 1325 aa26.45■■□□□ 1.83
CDKN2A-202ENST00000380150 TMEM88BA6NKF7 163 aa26.45■■□□□ 1.82
CDKN2A-202ENST00000380150 EIF6P56537 245 aaKnown RBP26.45■■□□□ 1.82
CDKN2A-202ENST00000380150 CNTROBQ8N137 903 aa26.45■■□□□ 1.82
CDKN2A-202ENST00000380150 MYBBP1AQ9BQG0 1328 aaKnown RBP26.44■■□□□ 1.82
CDKN2A-202ENST00000380150 LAMB2P55268 1798 aa26.44■■□□□ 1.82
CDKN2A-202ENST00000380150 HCLS1P14317 486 aaPredicted RBP26.44■■□□□ 1.82
CDKN2A-202ENST00000380150 EPS15P42566 896 aa26.44■■□□□ 1.82
CDKN2A-202ENST00000380150 VEGFBP49765 207 aa26.44■■□□□ 1.82
CDKN2A-202ENST00000380150 SCNN1DP51172 638 aa26.44■■□□□ 1.82
CDKN2A-202ENST00000380150 FMR1Q06787 632 aaKnown RBP eCLIP26.44■■□□□ 1.82
CDKN2A-202ENST00000380150 LMOD3Q0VAK6 560 aa26.44■■□□□ 1.82
CDKN2A-202ENST00000380150 PNMA8AQ86V59 439 aaPredicted RBP26.44■■□□□ 1.82
CDKN2A-202ENST00000380150 NLRP10Q86W26 655 aa26.44■■□□□ 1.82
CDKN2A-202ENST00000380150 LAS1LQ9Y4W2 734 aaKnown RBP26.44■■□□□ 1.82
CDKN2A-202ENST00000380150 ANKRD36CQ5JPF3 1778 aa26.43■■□□□ 1.82
CDKN2A-202ENST00000380150 CHL1O00533 1208 aa26.43■■□□□ 1.82
CDKN2A-202ENST00000380150 AOC3Q16853 763 aa26.43■■□□□ 1.82
CDKN2A-202ENST00000380150 ATP6V0A2Q9Y487 856 aa26.43■■□□□ 1.82
CDKN2A-202ENST00000380150 FOXN1O15353 648 aa26.41■■□□□ 1.82
CDKN2A-202ENST00000380150 PPIP5K2O43314 1243 aa26.41■■□□□ 1.82
CDKN2A-202ENST00000380150 CHPF2Q9P2E5 772 aa26.41■■□□□ 1.82
CDKN2A-202ENST00000380150 TCIRG1Q13488 830 aa26.4■■□□□ 1.82
CDKN2A-202ENST00000380150 GRIPAP1Q4V328 841 aa26.4■■□□□ 1.82
CDKN2A-202ENST00000380150 NIM1KQ8IY84 436 aa26.4■■□□□ 1.82
CDKN2A-202ENST00000380150 DDX21Q9NR30 783 aaKnown RBP eCLIP26.4■■□□□ 1.82
CDKN2A-202ENST00000380150 RUNDC1Q96C34 613 aa26.39■■□□□ 1.82
CDKN2A-202ENST00000380150 ADAMTS8Q9UP79 889 aa26.39■■□□□ 1.82
CDKN2A-202ENST00000380150 LMOD1P29536 600 aaPredicted RBP26.38■■□□□ 1.81
CDKN2A-202ENST00000380150 TRMT112Q9UI30 125 aaKnown RBP26.38■■□□□ 1.81
CDKN2A-202ENST00000380150 TAF1P21675 1872 aa26.38■■□□□ 1.81
CDKN2A-202ENST00000380150 HSP90AB3PQ58FF7 597 aa26.37■■□□□ 1.81
CDKN2A-202ENST00000380150 CXCL9Q07325 125 aa26.35■■□□□ 1.81
CDKN2A-202ENST00000380150 WDR43Q15061 677 aaKnown RBP eCLIP26.35■■□□□ 1.81
CDKN2A-202ENST00000380150 HDGFL1Q5TGJ6 251 aa26.35■■□□□ 1.81
CDKN2A-202ENST00000380150 SP8Q8IXZ3 490 aa26.35■■□□□ 1.81
CDKN2A-202ENST00000380150 RTFDC1Q9BY42 306 aaPredicted RBP26.35■■□□□ 1.81
CDKN2A-202ENST00000380150 SH3TC1Q8TE82 1336 aa26.35■■□□□ 1.81
CDKN2A-202ENST00000380150 RASSF10A6NK89 507 aa26.34■■□□□ 1.81
CDKN2A-202ENST00000380150 TRAF5O00463 557 aa26.34■■□□□ 1.81
CDKN2A-202ENST00000380150 DPP8Q6V1X1 898 aaPredicted RBP26.34■■□□□ 1.81
CDKN2A-202ENST00000380150 COL4A1P02462 1669 aa26.34■■□□□ 1.81
CDKN2A-202ENST00000380150 BBOX1O75936 387 aa26.33■■□□□ 1.81
CDKN2A-202ENST00000380150 DEFB115Q30KQ5 88 aa26.33■■□□□ 1.81
CDKN2A-202ENST00000380150 MPNDQ8N594 471 aa26.33■■□□□ 1.81
CDKN2A-202ENST00000380150 TMX4Q9H1E5 349 aaPredicted RBP26.33■■□□□ 1.81
CDKN2A-202ENST00000380150 ZNRF3Q9ULT6 936 aa26.33■■□□□ 1.81
CDKN2A-202ENST00000380150 DDX60Q8IY21 1712 aaKnown RBP26.32■■□□□ 1.8
CDKN2A-202ENST00000380150 ATP5J2-PTCD1G3V325 749 aa26.32■■□□□ 1.8
CDKN2A-202ENST00000380150 ZEB1P37275 1124 aaPredicted RBP26.32■■□□□ 1.8
CDKN2A-202ENST00000380150 GRAPQ13588 217 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms