RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 FERMT1Q9BQL6 677 aa11.39□□□□□ -0.59
TRERF1-204ENST00000372922 NCOA1Q15788 1441 aa11.39□□□□□ -0.59
TRERF1-204ENST00000372922 SYCE3A1L190 88 aa11.39□□□□□ -0.59
TRERF1-204ENST00000372922 IARSP41252 1262 aaKnown RBP11.39□□□□□ -0.59
TRERF1-204ENST00000372922 DENND4BO75064 1496 aaPredicted RBP11.39□□□□□ -0.59
TRERF1-204ENST00000372922 MTIF2P46199 727 aaKnown RBP11.38□□□□□ -0.59
TRERF1-204ENST00000372922 TDRD12Q587J7 1177 aaKnown RBP11.38□□□□□ -0.59
TRERF1-204ENST00000372922 TAOK3Q9H2K8 898 aa11.38□□□□□ -0.59
TRERF1-204ENST00000372922 PAFAH1B1P43034 410 aa11.38□□□□□ -0.59
TRERF1-204ENST00000372922 KANK3Q6NY19 840 aa11.38□□□□□ -0.59
TRERF1-204ENST00000372922 GCOM1H8Y6P7 765 aaPredicted RBP11.38□□□□□ -0.59
TRERF1-204ENST00000372922 MYZAPP0CAP1 466 aa11.38□□□□□ -0.59
TRERF1-204ENST00000372922 CCDC40Q4G0X9 1142 aa11.38□□□□□ -0.59
TRERF1-204ENST00000372922 NCOA7Q8NI08 942 aa11.38□□□□□ -0.59
TRERF1-204ENST00000372922 SUDS3Q9H7L9 328 aaPredicted RBP11.38□□□□□ -0.59
TRERF1-204ENST00000372922 CCT2P78371 535 aaKnown RBP11.38□□□□□ -0.59
TRERF1-204ENST00000372922 FBXO31Q5XUX0 539 aaPredicted RBP11.38□□□□□ -0.59
TRERF1-204ENST00000372922 CALCOCO1Q9P1Z2 691 aa11.38□□□□□ -0.59
TRERF1-204ENST00000372922 CEBPAP49715 358 aaPredicted RBP11.37□□□□□ -0.59
TRERF1-204ENST00000372922 SETDB2Q96T68 719 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 CCDC113Q9H0I3 377 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 PTPN14Q15678 1187 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 GOPCQ9HD26 462 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 HMG20BQ9P0W2 317 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 USP16Q9Y5T5 823 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 TOM1O60784 492 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 METAP2P50579 478 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRERF1-204ENST00000372922 IFFO1Q0D2I5 559 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 ATP5J2-PTCD1G3V325 749 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 IDI1Q13907 227 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 KIF4BQ2VIQ3 1234 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 PDCL2Q8N4E4 241 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 UBA7P41226 1012 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 TCERG1LQ5VWI1 586 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 UBE3BQ7Z3V4 1068 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 ERMNQ8TAM6 284 aa11.37□□□□□ -0.59
TRERF1-204ENST00000372922 FSIP1Q8NA03 581 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 SMARCC1Q92922 1105 aaPredicted RBP11.36□□□□□ -0.59
TRERF1-204ENST00000372922 ALS2CR12Q96Q35 445 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 MACROD2A1Z1Q3 448 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 LAMC3Q9Y6N6 1575 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 CCDC174Q6PII3 467 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 HOMEZQ8IX15 550 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 BICD1Q96G01 975 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 COMMD10Q9Y6G5 202 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 TMCO5BA8MYB1 307 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 PRC1O43663 620 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 WDR97A6NE52 1622 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 OGFOD1Q8N543 542 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 KRT23Q9C075 422 aa11.36□□□□□ -0.59
TRERF1-204ENST00000372922 DDX19AQ9NUU7 478 aaKnown RBP11.36□□□□□ -0.59
TRERF1-204ENST00000372922 TSPY3P0CV98 308 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 TSPY8P0CW00 308 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 ZCRB1Q8TBF4 217 aaKnown RBP11.35□□□□□ -0.59
TRERF1-204ENST00000372922 PABPN1LA6NDY0 278 aaKnown RBP11.35□□□□□ -0.59
TRERF1-204ENST00000372922 TBCAO75347 108 aaKnown RBP11.35□□□□□ -0.59
TRERF1-204ENST00000372922 IDEP14735 1019 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 TMCO3Q6UWJ1 677 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 NAA15Q9BXJ9 866 aaKnown RBP11.35□□□□□ -0.59
TRERF1-204ENST00000372922 SCAF11Q99590 1463 aaKnown RBP11.35□□□□□ -0.59
TRERF1-204ENST00000372922 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 CCDC144CPQ8IYA2 1237 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 CCDC172P0C7W6 258 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 NEK1Q96PY6 1258 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 ADGRF5Q8IZF2 1346 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 NBPF7P0C2Y1 421 aaPredicted RBP11.35□□□□□ -0.59
TRERF1-204ENST00000372922 GTF2F1P35269 517 aaKnown RBP eCLIP11.35□□□□□ -0.59
TRERF1-204ENST00000372922 ATP6V1AP38606 617 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 KIF18AQ8NI77 898 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 POLR3GO15318 223 aaPredicted RBP11.35□□□□□ -0.59
TRERF1-204ENST00000372922 PUF60Q9UHX1 559 aaKnown RBP11.35□□□□□ -0.59
TRERF1-204ENST00000372922 ABCC5O15440 1437 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 NOS1P29475 1434 aa11.35□□□□□ -0.59
TRERF1-204ENST00000372922 ACEP12821 1306 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 USP37Q86T82 979 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 SLC26A6Q9BXS9 759 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 ZFYP08048 801 aaPredicted RBP11.34□□□□□ -0.59
TRERF1-204ENST00000372922 GIGYF2Q6Y7W6 1299 aaKnown RBP11.34□□□□□ -0.59
TRERF1-204ENST00000372922 TMTC2Q8N394 836 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 UTP14AQ9BVJ6 771 aaKnown RBP11.34□□□□□ -0.59
TRERF1-204ENST00000372922 NYXQ9GZU5 481 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 SNRKQ9NRH2 765 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 CLIP2Q9UDT6 1046 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 PCF11O94913 1555 aaKnown RBP11.34□□□□□ -0.59
TRERF1-204ENST00000372922 MCM5P33992 734 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 CEP63Q96MT8 703 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 SHTN1A0MZ66 631 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 B4DLN1 442 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 STX6O43752 255 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 MRPL12P52815 198 aaKnown RBP11.34□□□□□ -0.59
TRERF1-204ENST00000372922 GRIPAP1Q4V328 841 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 CKAP2LQ8IYA6 745 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 NLRP3Q96P20 1036 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 PI4KAP2A4QPH2 592 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 STX1AQ16623 288 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 MICU3Q86XE3 530 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 PI4KAP1Q8N8J0 262 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 LRRC45Q96CN5 670 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 RMND1Q9NWS8 449 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 ORC3Q9UBD5 711 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms