RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 CEBPAP49715 358 aaPredicted RBP25.51■■□□□ 1.67
TM9SF3-201ENST00000371142 PRPF4BQ13523 1007 aaKnown RBP25.51■■□□□ 1.67
TM9SF3-201ENST00000371142 IFNL2Q8IZJ0 200 aa25.51■■□□□ 1.67
TM9SF3-201ENST00000371142 NGLY1Q96IV0 654 aa25.51■■□□□ 1.67
TM9SF3-201ENST00000371142 ALS2CR12Q96Q35 445 aa25.51■■□□□ 1.67
TM9SF3-201ENST00000371142 HLTFQ14527 1009 aaKnown RBP eCLIP25.51■■□□□ 1.67
TM9SF3-201ENST00000371142 HOOK3Q86VS8 718 aa25.51■■□□□ 1.67
TM9SF3-201ENST00000371142 PIK3R4Q99570 1358 aa25.5■■□□□ 1.67
TM9SF3-201ENST00000371142 IGHDP01880 384 aa25.5■■□□□ 1.67
TM9SF3-201ENST00000371142 TTC21BQ7Z4L5 1316 aa25.5■■□□□ 1.67
TM9SF3-201ENST00000371142 DDX46Q7L014 1031 aaKnown RBP25.5■■□□□ 1.67
TM9SF3-201ENST00000371142 PKNOX2Q96KN3 472 aa25.5■■□□□ 1.67
TM9SF3-201ENST00000371142 SAMM50Q9Y512 469 aa25.5■■□□□ 1.67
TM9SF3-201ENST00000371142 GCOM1H8Y6P7 765 aaPredicted RBP25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 MYZAPP0CAP1 466 aa25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 FERMT2Q96AC1 680 aa25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 SYCP3Q8IZU3 236 aa25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 CGNQ9P2M7 1197 aaKnown RBP25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 GSDMDP57764 484 aa25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 CETN1Q12798 172 aa25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 PRC1O43663 620 aa25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 NOP2P46087 812 aaKnown RBP25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 BMP2KLQ5H9B9 411 aa25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 ADGRL1O94910 1474 aa25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 UBA7P41226 1012 aa25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 MMRN2Q9H8L6 949 aa25.49■■□□□ 1.67
TM9SF3-201ENST00000371142 BAG3O95817 575 aa25.48■■□□□ 1.67
TM9SF3-201ENST00000371142 SPECC1Q5M775 1068 aa25.48■■□□□ 1.67
TM9SF3-201ENST00000371142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.48■■□□□ 1.672e-6■□□□□ 10.3
TM9SF3-201ENST00000371142 NOS1P29475 1434 aa25.48■■□□□ 1.67
TM9SF3-201ENST00000371142 ABCC5O15440 1437 aa25.48■■□□□ 1.67
TM9SF3-201ENST00000371142 PAXIP1Q6ZW49 1069 aaPredicted RBP25.48■■□□□ 1.67
TM9SF3-201ENST00000371142 NECAB1Q8N987 351 aa25.48■■□□□ 1.67
TM9SF3-201ENST00000371142 IDI1Q13907 227 aa25.47■■□□□ 1.67
TM9SF3-201ENST00000371142 RNF187Q5TA31 235 aaPredicted RBP25.47■■□□□ 1.67
TM9SF3-201ENST00000371142 ANKRD24Q8TF21 1146 aa25.47■■□□□ 1.67
TM9SF3-201ENST00000371142 KIF14Q15058 1648 aa25.47■■□□□ 1.67
TM9SF3-201ENST00000371142 LDHCP07864 332 aa25.47■■□□□ 1.67
TM9SF3-201ENST00000371142 NEMFO60524 1076 aa25.47■■□□□ 1.67
TM9SF3-201ENST00000371142 ZNF165P49910 485 aa25.47■■□□□ 1.67
TM9SF3-201ENST00000371142 PUF60Q9UHX1 559 aaKnown RBP25.46■■□□□ 1.67
TM9SF3-201ENST00000371142 WDHD1O75717 1129 aaPredicted RBP25.46■■□□□ 1.67
TM9SF3-201ENST00000371142 FBLN1P23142 703 aa25.46■■□□□ 1.67
TM9SF3-201ENST00000371142 CABP5Q9NP86 173 aa25.46■■□□□ 1.67
TM9SF3-201ENST00000371142 FAM114A1Q8IWE2 563 aa25.46■■□□□ 1.67
TM9SF3-201ENST00000371142 TEX13AQ9BXU3 409 aaPredicted RBP25.46■■□□□ 1.67
TM9SF3-201ENST00000371142 LRRC2Q9BYS8 371 aa25.46■■□□□ 1.67
TM9SF3-201ENST00000371142 SNW1Q13573 536 aaKnown RBP25.45■■□□□ 1.67
TM9SF3-201ENST00000371142 CHRNA2Q15822 529 aa25.45■■□□□ 1.67
TM9SF3-201ENST00000371142 CCDC102BQ68D86 513 aa25.45■■□□□ 1.67
TM9SF3-201ENST00000371142 HMG20BQ9P0W2 317 aa25.45■■□□□ 1.67
TM9SF3-201ENST00000371142 MYO1BO43795 1136 aa25.45■■□□□ 1.66
TM9SF3-201ENST00000371142 PPM1FP49593 454 aaPredicted RBP25.45■■□□□ 1.66
TM9SF3-201ENST00000371142 ZNF622Q969S3 477 aaKnown RBP eCLIP25.45■■□□□ 1.66
TM9SF3-201ENST00000371142 HLA-DOAP06340 250 aa25.45■■□□□ 1.66
TM9SF3-201ENST00000371142 KIAA0586Q9BVV6 1533 aa25.44■■□□□ 1.66
TM9SF3-201ENST00000371142 UBE2HP62256 183 aa25.44■■□□□ 1.66
TM9SF3-201ENST00000371142 IQGAP2Q13576 1575 aa25.44■■□□□ 1.66
TM9SF3-201ENST00000371142 SMC1AQ14683 1233 aaKnown RBP25.44■■□□□ 1.66
TM9SF3-201ENST00000371142 KLF18A0A0U1RQI7 1052 aa25.44■■□□□ 1.66
TM9SF3-201ENST00000371142 NAA15Q9BXJ9 866 aaKnown RBP25.44■■□□□ 1.66
TM9SF3-201ENST00000371142 GIMAP6Q6P9H5 292 aa25.44■■□□□ 1.66
TM9SF3-201ENST00000371142 JADE2Q9NQC1 790 aa25.44■■□□□ 1.66
TM9SF3-201ENST00000371142 SNRPA1P09661 255 aaKnown RBP25.43■■□□□ 1.66
TM9SF3-201ENST00000371142 BRF1Q92994 677 aa25.43■■□□□ 1.66
TM9SF3-201ENST00000371142 ZSWIM4Q9H7M6 989 aa25.43■■□□□ 1.66
TM9SF3-201ENST00000371142 MCM5P33992 734 aa25.43■■□□□ 1.66
TM9SF3-201ENST00000371142 TAOK3Q9H2K8 898 aa25.43■■□□□ 1.66
TM9SF3-201ENST00000371142 SCAF11Q99590 1463 aaKnown RBP25.43■■□□□ 1.66
TM9SF3-201ENST00000371142 DISP3Q9P2K9 1392 aa25.43■■□□□ 1.66
TM9SF3-201ENST00000371142 RHPN1Q8TCX5 695 aa25.43■■□□□ 1.66
TM9SF3-201ENST00000371142 TRIM47Q96LD4 638 aa25.43■■□□□ 1.66
TM9SF3-201ENST00000371142 KANK3Q6NY19 840 aa25.43■■□□□ 1.66
TM9SF3-201ENST00000371142 CRNKL1Q9BZJ0 848 aaKnown RBP25.43■■□□□ 1.66
TM9SF3-201ENST00000371142 ACEP12821 1306 aa25.42■■□□□ 1.66
TM9SF3-201ENST00000371142 EXOC1Q9NV70 894 aa25.42■■□□□ 1.66
TM9SF3-201ENST00000371142 CHPF2Q9P2E5 772 aa25.42■■□□□ 1.66
TM9SF3-201ENST00000371142 STX8Q9UNK0 236 aa25.42■■□□□ 1.66
TM9SF3-201ENST00000371142 WTAPQ15007 396 aa25.42■■□□□ 1.66
TM9SF3-201ENST00000371142 RFC4P35249 363 aa25.42■■□□□ 1.66
TM9SF3-201ENST00000371142 STXBP4Q6ZWJ1 553 aa25.42■■□□□ 1.66
TM9SF3-201ENST00000371142 PLB1Q6P1J6 1458 aa25.42■■□□□ 1.66
TM9SF3-201ENST00000371142 CC2D2AQ9P2K1 1620 aa25.42■■□□□ 1.66
TM9SF3-201ENST00000371142 DNMBPQ6XZF7 1577 aa25.42■■□□□ 1.66
TM9SF3-201ENST00000371142 AFMP43652 599 aa25.41■■□□□ 1.66
TM9SF3-201ENST00000371142 CTR9Q6PD62 1173 aa25.41■■□□□ 1.66
TM9SF3-201ENST00000371142 ANKRD13DQ6ZTN6 518 aa25.41■■□□□ 1.66
TM9SF3-201ENST00000371142 MAATS1Q7Z4T9 603 aa25.41■■□□□ 1.66
TM9SF3-201ENST00000371142 ZSCAN23Q3MJ62 389 aa25.41■■□□□ 1.66
TM9SF3-201ENST00000371142 TCEANC2Q96MN5 208 aa25.41■■□□□ 1.66
TM9SF3-201ENST00000371142 TMX3Q96JJ7 454 aa25.41■■□□□ 1.66
TM9SF3-201ENST00000371142 IQSEC3Q9UPP2 1182 aaPredicted RBP25.41■■□□□ 1.66
TM9SF3-201ENST00000371142 NSD2O96028 1365 aa25.41■■□□□ 1.66
TM9SF3-201ENST00000371142 BICD1Q96G01 975 aa25.4■■□□□ 1.66
TM9SF3-201ENST00000371142 PYM1Q9BRP8 204 aaKnown RBP25.4■■□□□ 1.66
TM9SF3-201ENST00000371142 STAMBPO95630 424 aa25.4■■□□□ 1.66
TM9SF3-201ENST00000371142 HSP90AA4PQ58FG1 418 aa25.4■■□□□ 1.66
TM9SF3-201ENST00000371142 SMARCC1Q92922 1105 aaPredicted RBP25.4■■□□□ 1.66
TM9SF3-201ENST00000371142 SYKP43405 635 aa25.4■■□□□ 1.66
TM9SF3-201ENST00000371142 N4BP3O15049 544 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms