RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 GIGYF2Q6Y7W6 1299 aaKnown RBP19.74■□□□□ 0.75
SS18L1-202ENST00000370848 MBIPQ9NS73 344 aa19.74■□□□□ 0.75
SS18L1-202ENST00000370848 DDNO94850 711 aaPredicted RBP19.73■□□□□ 0.75
SS18L1-202ENST00000370848 ZNF853P0CG23 659 aa19.73■□□□□ 0.75
SS18L1-202ENST00000370848 CC2D2BQ6DHV5 1058 aa19.73■□□□□ 0.75
SS18L1-202ENST00000370848 KIF6Q6ZMV9 814 aa19.73■□□□□ 0.75
SS18L1-202ENST00000370848 CFAP44Q96MT7 982 aa19.73■□□□□ 0.75
SS18L1-202ENST00000370848 IQCA1LA6NCM1 817 aa19.72■□□□□ 0.75
SS18L1-202ENST00000370848 NTSR2O95665 410 aa19.72■□□□□ 0.75
SS18L1-202ENST00000370848 GRIPAP1Q4V328 841 aa19.72■□□□□ 0.75
SS18L1-202ENST00000370848 CHADLQ6NUI6 762 aa19.72■□□□□ 0.75
SS18L1-202ENST00000370848 WWC1Q8IX03 1113 aa19.72■□□□□ 0.75
SS18L1-202ENST00000370848 RNF123Q5XPI4 1314 aa19.72■□□□□ 0.75
SS18L1-202ENST00000370848 FZD9O00144 591 aa19.71■□□□□ 0.75
SS18L1-202ENST00000370848 IFT57Q9NWB7 429 aa19.71■□□□□ 0.75
SS18L1-202ENST00000370848 COL4A5P29400 1685 aa19.71■□□□□ 0.75
SS18L1-202ENST00000370848 EIF2S2P20042 333 aaKnown RBP19.7■□□□□ 0.74
SS18L1-202ENST00000370848 CCDC27Q2M243 656 aa19.7■□□□□ 0.74
SS18L1-202ENST00000370848 PARP10Q53GL7 1025 aa19.7■□□□□ 0.74
SS18L1-202ENST00000370848 MIER1Q8N108 512 aa19.7■□□□□ 0.74
SS18L1-202ENST00000370848 NECTIN2Q92692 538 aa19.7■□□□□ 0.74
SS18L1-202ENST00000370848 CRAMP1Q96RY5 1269 aa19.7■□□□□ 0.74
SS18L1-202ENST00000370848 PASKQ96RG2 1323 aa19.7■□□□□ 0.74
SS18L1-202ENST00000370848 CCER2I3L3R5 266 aa19.69■□□□□ 0.74
SS18L1-202ENST00000370848 MYL6BP14649 208 aa19.69■□□□□ 0.74
SS18L1-202ENST00000370848 IARSP41252 1262 aaKnown RBP19.69■□□□□ 0.74
SS18L1-202ENST00000370848 SUSD4Q5VX71 490 aa19.69■□□□□ 0.74
SS18L1-202ENST00000370848 OLFM4Q6UX06 510 aa19.69■□□□□ 0.74
SS18L1-202ENST00000370848 NUTM1Q86Y26 1132 aa19.69■□□□□ 0.74
SS18L1-202ENST00000370848 NGEFQ8N5V2 710 aa19.69■□□□□ 0.74
SS18L1-202ENST00000370848 TAF1DQ9H5J8 278 aaPredicted RBP19.69■□□□□ 0.74
SS18L1-202ENST00000370848 ZNF541Q9H0D2 1346 aa19.69■□□□□ 0.74
SS18L1-202ENST00000370848 LAMB2P55268 1798 aa19.68■□□□□ 0.74
SS18L1-202ENST00000370848 ANXA1P04083 346 aa19.68■□□□□ 0.74
SS18L1-202ENST00000370848 POTEIP0CG38 1075 aa19.68■□□□□ 0.74
SS18L1-202ENST00000370848 POTEJP0CG39 1038 aa19.68■□□□□ 0.74
SS18L1-202ENST00000370848 GTF2E1P29083 439 aaPredicted RBP19.68■□□□□ 0.74
SS18L1-202ENST00000370848 GNAI1P63096 354 aa19.68■□□□□ 0.74
SS18L1-202ENST00000370848 CALD1Q05682 793 aaKnown RBP19.68■□□□□ 0.74
SS18L1-202ENST00000370848 PROSER3Q2NL68 480 aa19.68■□□□□ 0.74
SS18L1-202ENST00000370848 SLC10A5Q5PT55 438 aa19.68■□□□□ 0.74
SS18L1-202ENST00000370848 LDHDQ86WU2 507 aa19.68■□□□□ 0.74
SS18L1-202ENST00000370848 TSR2Q969E8 191 aaKnown RBP19.68■□□□□ 0.74
SS18L1-202ENST00000370848 ZBTB3Q9H5J0 574 aa19.68■□□□□ 0.74
SS18L1-202ENST00000370848 ZNF277Q9NRM2 450 aaPredicted RBP19.68■□□□□ 0.74
SS18L1-202ENST00000370848 CREBZFQ9NS37 354 aa19.68■□□□□ 0.74
SS18L1-202ENST00000370848 FAM177BA6PVY3 158 aa19.67■□□□□ 0.74
SS18L1-202ENST00000370848 PPP1R42Q7Z4L9 355 aa19.66■□□□□ 0.74
SS18L1-202ENST00000370848 GPC2Q8N158 579 aa19.66■□□□□ 0.74
SS18L1-202ENST00000370848 SYNE4Q8N205 404 aa19.66■□□□□ 0.74
SS18L1-202ENST00000370848 GPTP24298 496 aa19.65■□□□□ 0.74
SS18L1-202ENST00000370848 DUSP27Q5VZP5 1158 aa19.65■□□□□ 0.74
SS18L1-202ENST00000370848 LTBP1Q14766 1721 aa19.65■□□□□ 0.74
SS18L1-202ENST00000370848 ELL2O00472 640 aaPredicted RBP19.64■□□□□ 0.73
SS18L1-202ENST00000370848 ITGBL1O95965 494 aaPredicted RBP19.64■□□□□ 0.73
SS18L1-202ENST00000370848 HOXB7P09629 217 aa19.64■□□□□ 0.73
SS18L1-202ENST00000370848 NCBP3Q53F19 620 aaKnown RBP19.64■□□□□ 0.73
SS18L1-202ENST00000370848 C8orf58Q8NAV2 365 aa19.64■□□□□ 0.73
SS18L1-202ENST00000370848 RPGRQ92834 1020 aaKnown RBP19.64■□□□□ 0.73
SS18L1-202ENST00000370848 VPS33BQ9H267 617 aa19.64■□□□□ 0.73
SS18L1-202ENST00000370848 HACL1Q9UJ83 578 aa19.64■□□□□ 0.73
SS18L1-202ENST00000370848 LRRC37AA6NMS7 1700 aa19.64■□□□□ 0.73
SS18L1-202ENST00000370848 C3orf67Q6ZVT6 689 aa19.63■□□□□ 0.73
SS18L1-202ENST00000370848 RBM17Q96I25 401 aaKnown RBP19.63■□□□□ 0.73
SS18L1-202ENST00000370848 SPINK5Q9NQ38 1064 aaPredicted RBP19.63■□□□□ 0.73
SS18L1-202ENST00000370848 DDX21Q9NR30 783 aaKnown RBP eCLIP19.63■□□□□ 0.73
SS18L1-202ENST00000370848 HSP90AB3PQ58FF7 597 aa19.62■□□□□ 0.73
SS18L1-202ENST00000370848 HDGFL1Q5TGJ6 251 aa19.62■□□□□ 0.73
SS18L1-202ENST00000370848 PNMA8AQ86V59 439 aaPredicted RBP19.62■□□□□ 0.73
SS18L1-202ENST00000370848 TSPYL6Q8N831 410 aa19.62■□□□□ 0.73
SS18L1-202ENST00000370848 CNTNAP1P78357 1384 aa19.61■□□□□ 0.73
SS18L1-202ENST00000370848 IL16Q14005 1332 aa19.61■□□□□ 0.73
SS18L1-202ENST00000370848 PPEF1O14829 653 aaPredicted RBP19.61■□□□□ 0.73
SS18L1-202ENST00000370848 NLRP3Q96P20 1036 aa19.61■□□□□ 0.73
SS18L1-202ENST00000370848 UTP14AQ9BVJ6 771 aaKnown RBP19.61■□□□□ 0.73
SS18L1-202ENST00000370848 RTFDC1Q9BY42 306 aaPredicted RBP19.61■□□□□ 0.73
SS18L1-202ENST00000370848 CHPF2Q9P2E5 772 aa19.61■□□□□ 0.73
SS18L1-202ENST00000370848 DDX60Q8IY21 1712 aaKnown RBP19.61■□□□□ 0.73
SS18L1-202ENST00000370848 EPHX2P34913 555 aa19.6■□□□□ 0.73
SS18L1-202ENST00000370848 NLRP10Q86W26 655 aa19.6■□□□□ 0.73
SS18L1-202ENST00000370848 JDP2Q8WYK2 163 aa19.6■□□□□ 0.73
SS18L1-202ENST00000370848 ATP6V0A2Q9Y487 856 aa19.6■□□□□ 0.73
SS18L1-202ENST00000370848 FANCIQ9NVI1 1328 aa19.59■□□□□ 0.73
SS18L1-202ENST00000370848 COL13A1Q5TAT6 717 aaPredicted RBP19.59■□□□□ 0.73
SS18L1-202ENST00000370848 COPS6Q7L5N1 327 aa19.59■□□□□ 0.73
SS18L1-202ENST00000370848 WDR63Q8IWG1 891 aa19.59■□□□□ 0.73
SS18L1-202ENST00000370848 DUOX1Q9NRD9 1551 aa19.58■□□□□ 0.73
SS18L1-202ENST00000370848 ABCC4O15439 1325 aa19.58■□□□□ 0.73
SS18L1-202ENST00000370848 ZNF521Q96K83 1311 aa19.58■□□□□ 0.73
SS18L1-202ENST00000370848 HSPA1AP0DMV8 641 aaKnown RBP19.58■□□□□ 0.72
SS18L1-202ENST00000370848 HSPA1BP0DMV9 641 aaKnown RBP19.58■□□□□ 0.72
SS18L1-202ENST00000370848 TCIRG1Q13488 830 aa19.58■□□□□ 0.72
SS18L1-202ENST00000370848 XAGE3Q8WTP9 111 aa19.58■□□□□ 0.72
SS18L1-202ENST00000370848 THSD7BQ9C0I4 1608 aa19.58■□□□□ 0.72
SS18L1-202ENST00000370848 SCNN1DP51172 638 aa19.57■□□□□ 0.72
SS18L1-202ENST00000370848 AIMP1Q12904 312 aaKnown RBP19.57■□□□□ 0.72
SS18L1-202ENST00000370848 SLC51AQ86UW1 340 aa19.57■□□□□ 0.72
SS18L1-202ENST00000370848 BBOX1O75936 387 aa19.56■□□□□ 0.72
SS18L1-202ENST00000370848 EIF6P56537 245 aaKnown RBP19.56■□□□□ 0.72
SS18L1-202ENST00000370848 TMEM88BA6NKF7 163 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms