RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 TNRC18O15417 2968 aaPredicted RBP19.35■□□□□ 0.69
LMO4-201ENST00000370542 POTEIP0CG38 1075 aa19.35■□□□□ 0.69
LMO4-201ENST00000370542 POTEJP0CG39 1038 aa19.35■□□□□ 0.69
LMO4-201ENST00000370542 TTLL7Q6ZT98 887 aa19.35■□□□□ 0.69
LMO4-201ENST00000370542 TAOK3Q9H2K8 898 aa19.35■□□□□ 0.69
LMO4-201ENST00000370542 PDIA6Q15084 440 aa19.34■□□□□ 0.69
LMO4-201ENST00000370542 CRY2Q49AN0 593 aa19.34■□□□□ 0.69
LMO4-201ENST00000370542 TSPYL4Q9UJ04 414 aa19.34■□□□□ 0.69
LMO4-201ENST00000370542 LMOD3Q0VAK6 560 aa19.33■□□□□ 0.68
LMO4-201ENST00000370542 ERFEQ4G0M1 354 aa19.33■□□□□ 0.68
LMO4-201ENST00000370542 ZNF34Q8IZ26 560 aa19.33■□□□□ 0.68
LMO4-201ENST00000370542 NYXQ9GZU5 481 aa19.33■□□□□ 0.68
LMO4-201ENST00000370542 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
LMO4-201ENST00000370542 RRP7AQ9Y3A4 280 aaKnown RBP19.33■□□□□ 0.68
LMO4-201ENST00000370542 SNED1Q8TER0 1413 aa19.33■□□□□ 0.68
LMO4-201ENST00000370542 GIGYF2Q6Y7W6 1299 aaKnown RBP19.32■□□□□ 0.68
LMO4-201ENST00000370542 CACNA1SQ13698 1873 aa19.32■□□□□ 0.68
LMO4-201ENST00000370542 UBN2Q6ZU65 1347 aa19.31■□□□□ 0.68
LMO4-201ENST00000370542 TMEM88BA6NKF7 163 aa19.31■□□□□ 0.68
LMO4-201ENST00000370542 CCDC93Q567U6 631 aa19.31■□□□□ 0.68
LMO4-201ENST00000370542 CHL1O00533 1208 aa19.3■□□□□ 0.68
LMO4-201ENST00000370542 MYL6BP14649 208 aa19.3■□□□□ 0.68
LMO4-201ENST00000370542 ALDH1B1P30837 517 aa19.3■□□□□ 0.68
LMO4-201ENST00000370542 HOXA10P31260 410 aaPredicted RBP19.3■□□□□ 0.68
LMO4-201ENST00000370542 KIF6Q6ZMV9 814 aa19.3■□□□□ 0.68
LMO4-201ENST00000370542 NGEFQ8N5V2 710 aa19.3■□□□□ 0.68
LMO4-201ENST00000370542 TRIM35Q9UPQ4 493 aa19.3■□□□□ 0.68
LMO4-201ENST00000370542 ABCC12Q96J65 1359 aa19.3■□□□□ 0.68
LMO4-201ENST00000370542 MAP2K1Q02750 393 aaPredicted RBP19.29■□□□□ 0.68
LMO4-201ENST00000370542 FKBP4Q02790 459 aaKnown RBP eCLIP19.29■□□□□ 0.68
LMO4-201ENST00000370542 RASSF10A6NK89 507 aa19.28■□□□□ 0.68
LMO4-201ENST00000370542 FAM177BA6PVY3 158 aa19.28■□□□□ 0.68
LMO4-201ENST00000370542 ITGBL1O95965 494 aaPredicted RBP19.28■□□□□ 0.68
LMO4-201ENST00000370542 HNRNPUQ00839 825 aaKnown RBP eCLIP19.28■□□□□ 0.68
LMO4-201ENST00000370542 SUSD4Q5VX71 490 aa19.28■□□□□ 0.68
LMO4-201ENST00000370542 RTKN2Q8IZC4 609 aa19.28■□□□□ 0.68
LMO4-201ENST00000370542 RUNDC1Q96C34 613 aa19.28■□□□□ 0.68
LMO4-201ENST00000370542 NTSR2O95665 410 aa19.27■□□□□ 0.68
LMO4-201ENST00000370542 NUTM1Q86Y26 1132 aa19.27■□□□□ 0.68
LMO4-201ENST00000370542 ZBTB3Q9H5J0 574 aa19.27■□□□□ 0.68
LMO4-201ENST00000370542 PRKRIP1Q9H875 184 aaPredicted RBP19.27■□□□□ 0.68
LMO4-201ENST00000370542 ADAMTS8Q9UP79 889 aa19.27■□□□□ 0.68
LMO4-201ENST00000370542 GTF2E1P29083 439 aaPredicted RBP19.26■□□□□ 0.67
LMO4-201ENST00000370542 PROSER3Q2NL68 480 aa19.26■□□□□ 0.67
LMO4-201ENST00000370542 PARP10Q53GL7 1025 aa19.26■□□□□ 0.67
LMO4-201ENST00000370542 SLC10A5Q5PT55 438 aa19.26■□□□□ 0.67
LMO4-201ENST00000370542 LDHDQ86WU2 507 aa19.26■□□□□ 0.67
LMO4-201ENST00000370542 L3MBTL3Q96JM7 780 aaPredicted RBP19.26■□□□□ 0.67
LMO4-201ENST00000370542 GPTP24298 496 aa19.25■□□□□ 0.67
LMO4-201ENST00000370542 CC2D2BQ6DHV5 1058 aa19.25■□□□□ 0.67
LMO4-201ENST00000370542 OLFM4Q6UX06 510 aa19.25■□□□□ 0.67
LMO4-201ENST00000370542 CCDC146Q8IYE0 955 aa19.25■□□□□ 0.67
LMO4-201ENST00000370542 PSMD1Q99460 953 aa19.25■□□□□ 0.67
LMO4-201ENST00000370542 DDNO94850 711 aaPredicted RBP19.24■□□□□ 0.67
LMO4-201ENST00000370542 EIF2S2P20042 333 aaKnown RBP19.24■□□□□ 0.67
LMO4-201ENST00000370542 DEFB115Q30KQ5 88 aa19.24■□□□□ 0.67
LMO4-201ENST00000370542 CRAMP1Q96RY5 1269 aa19.24■□□□□ 0.67
LMO4-201ENST00000370542 RNF123Q5XPI4 1314 aa19.24■□□□□ 0.67
LMO4-201ENST00000370542 WDR33Q9C0J8 1336 aaKnown RBP19.24■□□□□ 0.67
LMO4-201ENST00000370542 FZD9O00144 591 aa19.23■□□□□ 0.67
LMO4-201ENST00000370542 HOXB7P09629 217 aa19.23■□□□□ 0.67
LMO4-201ENST00000370542 GRIPAP1Q4V328 841 aa19.23■□□□□ 0.67
LMO4-201ENST00000370542 PPP1R42Q7Z4L9 355 aa19.23■□□□□ 0.67
LMO4-201ENST00000370542 DDX21Q9NR30 783 aaKnown RBP eCLIP19.23■□□□□ 0.67
LMO4-201ENST00000370542 ANXA1P04083 346 aa19.22■□□□□ 0.67
LMO4-201ENST00000370542 WDR43Q15061 677 aaKnown RBP eCLIP19.22■□□□□ 0.67
LMO4-201ENST00000370542 ZNF277Q9NRM2 450 aaPredicted RBP19.22■□□□□ 0.67
LMO4-201ENST00000370542 SCN4AP35499 1836 aa19.22■□□□□ 0.67
LMO4-201ENST00000370542 IARSP41252 1262 aaKnown RBP19.21■□□□□ 0.67
LMO4-201ENST00000370542 NEUROD2Q15784 382 aa19.21■□□□□ 0.67
LMO4-201ENST00000370542 C3orf67Q6ZVT6 689 aa19.21■□□□□ 0.67
LMO4-201ENST00000370542 COPS6Q7L5N1 327 aa19.21■□□□□ 0.67
LMO4-201ENST00000370542 SYNE4Q8N205 404 aa19.21■□□□□ 0.67
LMO4-201ENST00000370542 CFAP44Q96MT7 982 aa19.21■□□□□ 0.67
LMO4-201ENST00000370542 ZBED9Q6R2W3 1325 aa19.21■□□□□ 0.67
LMO4-201ENST00000370542 ZNF853P0CG23 659 aa19.2■□□□□ 0.66
LMO4-201ENST00000370542 KRT24Q2M2I5 525 aa19.2■□□□□ 0.66
LMO4-201ENST00000370542 HSP90AB3PQ58FF7 597 aa19.2■□□□□ 0.66
LMO4-201ENST00000370542 RPGRQ92834 1020 aaKnown RBP19.2■□□□□ 0.66
LMO4-201ENST00000370542 RBM17Q96I25 401 aaKnown RBP19.2■□□□□ 0.66
LMO4-201ENST00000370542 UTP14AQ9BVJ6 771 aaKnown RBP19.2■□□□□ 0.66
LMO4-201ENST00000370542 TAF1DQ9H5J8 278 aaPredicted RBP19.2■□□□□ 0.66
LMO4-201ENST00000370542 ANKRD36CQ5JPF3 1778 aa19.19■□□□□ 0.66
LMO4-201ENST00000370542 IQCA1LA6NCM1 817 aa19.19■□□□□ 0.66
LMO4-201ENST00000370542 TCIRG1Q13488 830 aa19.19■□□□□ 0.66
LMO4-201ENST00000370542 XAGE3Q8WTP9 111 aa19.19■□□□□ 0.66
LMO4-201ENST00000370542 NLRP3Q96P20 1036 aa19.19■□□□□ 0.66
LMO4-201ENST00000370542 NLRP10Q86W26 655 aa19.18■□□□□ 0.66
LMO4-201ENST00000370542 ZNF541Q9H0D2 1346 aa19.18■□□□□ 0.66
LMO4-201ENST00000370542 COL4A5P29400 1685 aa19.17■□□□□ 0.66
LMO4-201ENST00000370542 MCOLN1Q9GZU1 580 aa19.16■□□□□ 0.66
LMO4-201ENST00000370542 CHPF2Q9P2E5 772 aa19.16■□□□□ 0.66
LMO4-201ENST00000370542 ADAMTSL1Q8N6G6 1762 aa19.15■□□□□ 0.66
LMO4-201ENST00000370542 PPEF1O14829 653 aaPredicted RBP19.15■□□□□ 0.66
LMO4-201ENST00000370542 GPC2Q8N158 579 aa19.15■□□□□ 0.66
LMO4-201ENST00000370542 NECTIN2Q92692 538 aa19.15■□□□□ 0.66
LMO4-201ENST00000370542 VPS33BQ9H267 617 aa19.15■□□□□ 0.66
LMO4-201ENST00000370542 DBF4Q9UBU7 674 aaPredicted RBP19.15■□□□□ 0.66
LMO4-201ENST00000370542 NOP58Q9Y2X3 529 aaKnown RBP19.15■□□□□ 0.66
LMO4-201ENST00000370542 ATP6V0A2Q9Y487 856 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms