RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CCT4P50991 539 aaKnown RBP4.32□□□□□ -1.72
SYNE1-207ENST00000367255 RMND1Q9NWS8 449 aa4.32□□□□□ -1.72
SYNE1-207ENST00000367255 PPFIA2O75334 1257 aa4.32□□□□□ -1.72
SYNE1-207ENST00000367255 KIF4AO95239 1232 aa4.32□□□□□ -1.72
SYNE1-207ENST00000367255 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.32□□□□□ -1.72
SYNE1-207ENST00000367255 BRPF1P55201 1214 aaPredicted RBP4.32□□□□□ -1.72
SYNE1-207ENST00000367255 HINFPQ9BQA5 517 aa4.32□□□□□ -1.72
SYNE1-207ENST00000367255 CCT6AP40227 531 aaKnown RBP4.32□□□□□ -1.72
SYNE1-207ENST00000367255 KIF6Q6ZMV9 814 aa4.32□□□□□ -1.72
SYNE1-207ENST00000367255 CCDC148Q8NFR7 591 aa4.32□□□□□ -1.72
SYNE1-207ENST00000367255 CAPZA3Q96KX2 299 aa4.32□□□□□ -1.72
SYNE1-207ENST00000367255 ABCF2Q9UG63 623 aa4.32□□□□□ -1.72
SYNE1-207ENST00000367255 CCDC178Q5BJE1 867 aa4.32□□□□□ -1.72
SYNE1-207ENST00000367255 PANK3Q9H999 370 aa4.32□□□□□ -1.72
SYNE1-207ENST00000367255 MSH6P52701 1360 aa4.32□□□□□ -1.72
SYNE1-207ENST00000367255 ZNF131P52739 623 aa4.32□□□□□ -1.72
SYNE1-207ENST00000367255 NEK10Q6ZWH5 1172 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 HDGFL2Q7Z4V5 671 aaPredicted RBP4.31□□□□□ -1.72
SYNE1-207ENST00000367255 KRT85P78386 507 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 MIS12Q9H081 205 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 CAPN15O75808 1086 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 C17orf53Q8N3J3 647 aaPredicted RBP4.31□□□□□ -1.72
SYNE1-207ENST00000367255 LRRC45Q96CN5 670 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 FAN1Q9Y2M0 1017 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 TRIML1Q8N9V2 468 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 KCNG4Q8TDN1 519 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 FAM96AQ9H5X1 160 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 PPFIA4O75335 1185 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 ADGRL1O94910 1474 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 RAB11FIP3O75154 756 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 TEX11Q8IYF3 940 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 APAF1O14727 1248 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 CCDC183Q5T5S1 534 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 CACNA2D4Q7Z3S7 1137 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 GEMIN8Q9NWZ8 242 aaKnown RBP4.31□□□□□ -1.72
SYNE1-207ENST00000367255 C6orf163Q5TEZ5 329 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 ZNF280CQ8ND82 737 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 SPATS2LQ9NUQ6 558 aaKnown RBP4.31□□□□□ -1.72
SYNE1-207ENST00000367255 MFSD4BQ5TF39 518 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 VTI1AQ96AJ9 217 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 A0A1B0GUL7 405 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 KIF5CO60282 957 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 MCM4P33991 863 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 VEZTQ9HBM0 779 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 PRXQ9BXM0 1461 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 HSPA4P34932 840 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 ANKRD24Q8TF21 1146 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 GOLGA8QA0A0J9YX86 632 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 GOLGA8OA6NCC3 632 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 GOLGA8NF8WBI6 632 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 EFCAB13Q8IY85 973 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 CCDC57Q2TAC2 916 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 SATB2Q9UPW6 733 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 GPATCH11Q8N954 259 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 ESF1Q9H501 851 aaKnown RBP4.31□□□□□ -1.72
SYNE1-207ENST00000367255 C9orf84Q5VXU9 1444 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 OLFM4Q6UX06 510 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 CCDC121Q6ZUS5 278 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 PHLDB2Q86SQ0 1253 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 KCTD17Q8N5Z5 321 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 GOLGA5Q8TBA6 731 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 MTA3Q9BTC8 594 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 ATP6V1AP38606 617 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 MTMR3Q13615 1198 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 LRRCC1Q9C099 1032 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 DRC3Q9H069 523 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 PRC1O43663 620 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 PCK1P35558 622 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 BHMT2Q9H2M3 363 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 PSMA4P25789 261 aaKnown RBP4.31□□□□□ -1.72
SYNE1-207ENST00000367255 ITIH3Q06033 890 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 KIAA1107Q9UPP5 1409 aa4.31□□□□□ -1.72
SYNE1-207ENST00000367255 KRR1Q13601 381 aaKnown RBP4.3□□□□□ -1.72
SYNE1-207ENST00000367255 CCDC6Q16204 474 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 RETREG2Q8NC44 543 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 K7ELQ4 463 aaPredicted RBP4.3□□□□□ -1.72
SYNE1-207ENST00000367255 HOXB7P09629 217 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 ZNF330Q9Y3S2 320 aaPredicted RBP4.3□□□□□ -1.72
SYNE1-207ENST00000367255 ATXN2Q99700 1313 aaKnown RBP4.3□□□□□ -1.72
SYNE1-207ENST00000367255 PPP2R3AQ06190 1150 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 TSC22D1Q15714 1073 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 LMBR1Q8WVP7 490 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 CHAMP1Q96JM3 812 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 LSM1O15116 133 aaKnown RBP4.3□□□□□ -1.72
SYNE1-207ENST00000367255 EIF2AQ9BY44 585 aaKnown RBP4.3□□□□□ -1.72
SYNE1-207ENST00000367255 ATP2B1P20020 1258 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 MAP3K9P80192 1104 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 UBE2HP62256 183 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 TSNAXIP1Q2TAA8 658 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 GSDMBQ8TAX9 411 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 Q9H521 79 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 BCAR3O75815 825 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 ATP5BP06576 529 aaKnown RBP4.3□□□□□ -1.72
SYNE1-207ENST00000367255 MORC4Q8TE76 937 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 ZKSCAN5Q9Y2L8 839 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 CYTH3O43739 400 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 RCAN1P53805 252 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 RILPL2Q969X0 211 aa4.3□□□□□ -1.72
SYNE1-207ENST00000367255 ZFYP08048 801 aaPredicted RBP4.3□□□□□ -1.72
SYNE1-207ENST00000367255 NCOA1Q15788 1441 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms