RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CETN1Q12798 172 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.9□□□□□ -0.189e-7■■■■■ 149.5
CDC42BPA-203ENST00000366766 ANKRD24Q8TF21 1146 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 NEK1Q96PY6 1258 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 CLCN1P35523 988 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 HOXB7P09629 217 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 DCTPP1Q9H773 170 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 CCDC194A0A1B0GVG4 234 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 GJB2P29033 226 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 CCDC102BQ68D86 513 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 FSIP1Q8NA03 581 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 ZPR1O75312 459 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 CALCOCO1Q9P1Z2 691 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 MAP3K2Q9Y2U5 619 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 NPHP3Q7Z494 1330 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 TCP11L1Q9NUJ3 509 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 LDHCP07864 332 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 ZGPATQ8N5A5 531 aaKnown RBP13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 MYD88Q99836 296 aa13.89□□□□□ -0.19
CDC42BPA-203ENST00000366766 ACEP12821 1306 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 SDSP20132 328 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 RHPN1Q8TCX5 695 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 BAG3O95817 575 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 STXBP4Q6ZWJ1 553 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 DDX12PQ92771 950 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 ESYT1Q9BSJ8 1104 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 DISP1Q96F81 1524 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 ADCY5O95622 1261 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 FERMT3Q86UX7 667 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 SMARCA5O60264 1052 aaPredicted RBP13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 IARSP41252 1262 aaKnown RBP13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 RBM25P49756 843 aaKnown RBP13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 ZSCAN23Q3MJ62 389 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 DZIP1Q86YF9 867 aaKnown RBP13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 KDM5CP41229 1560 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 PAFAH1B1P43034 410 aa13.88□□□□□ -0.19
CDC42BPA-203ENST00000366766 SHTN1A0MZ66 631 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 TAOK3Q9H2K8 898 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 MIS18AQ9NYP9 233 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 CAMK4Q16566 473 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 MKNK2Q9HBH9 465 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 CCDC172P0C7W6 258 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 ATP8B2P98198 1209 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 MFSD6Q6ZSS7 791 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 MAP3K5Q99683 1374 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 YTHDC2Q9H6S0 1430 aaKnown RBP13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 ATP2B2Q01814 1243 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 ABCF2Q9UG63 623 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 PREX2Q70Z35 1606 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 GRM8O00222 908 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 RAB3GAP1Q15042 981 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 TMX3Q96JJ7 454 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 PI4KAP2A4QPH2 592 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 IGHDP01880 384 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 GNAT2P19087 354 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 TMEM132AQ24JP5 1023 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 PI4KAP1Q8N8J0 262 aa13.87□□□□□ -0.19
CDC42BPA-203ENST00000366766 ZNF76P36508 570 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 GNAQP50148 359 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 IFI16Q16666 785 aaKnown RBP13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 MRPL50Q8N5N7 158 aaKnown RBP13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 IFIT3O14879 490 aaKnown RBP13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 MICALCLQ6ZW33 695 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 NBPF7P0C2Y1 421 aaPredicted RBP13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 IL15P40933 162 aaPredicted RBP13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 CCDC102AQ96A19 550 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 GSTO1P78417 241 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 ANKRD13DQ6ZTN6 518 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 F6X3S4 739 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 TNNT1P13805 278 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 UBE3BQ7Z3V4 1068 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 PCDHB15Q9Y5E8 787 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 GOLGA8AA7E2F4 631 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 FMNL3Q8IVF7 1028 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 USP5P45974 858 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 METAP2P50579 478 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 C8orf34Q49A92 452 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 KSR2Q6VAB6 950 aa13.86□□□□□ -0.19
CDC42BPA-203ENST00000366766 ZBTB40Q9NUA8 1239 aa13.85□□□□□ -0.19
CDC42BPA-203ENST00000366766 CACNA2D4Q7Z3S7 1137 aa13.85□□□□□ -0.19
CDC42BPA-203ENST00000366766 LINS1Q8NG48 757 aa13.85□□□□□ -0.19
CDC42BPA-203ENST00000366766 MTMR7Q9Y216 660 aa13.85□□□□□ -0.19
CDC42BPA-203ENST00000366766 AKAP4Q5JQC9 854 aa13.85□□□□□ -0.19
CDC42BPA-203ENST00000366766 NUP88Q99567 741 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPA-203ENST00000366766 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.85□□□□□ -0.191e-6■■□□□ 12.6
CDC42BPA-203ENST00000366766 BRAPQ7Z569 592 aa13.85□□□□□ -0.19
CDC42BPA-203ENST00000366766 RNF123Q5XPI4 1314 aa13.85□□□□□ -0.19
CDC42BPA-203ENST00000366766 MPRIPQ6WCQ1 1025 aa13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 CUL5Q93034 780 aa13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 ZHX3Q9H4I2 956 aa13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 TRMT112Q9UI30 125 aaKnown RBP13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 USP25Q9UHP3 1055 aa13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 MCMDC2Q4G0Z9 681 aa13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 DMRT2Q9Y5R5 561 aa13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 RBM10P98175 930 aaKnown RBP13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 SNW1Q13573 536 aaKnown RBP13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 KIF4BQ2VIQ3 1234 aa13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms