RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 RHBDL3P58872 404 aa9.91□□□□□ -0.82
COMMD9-202ENST00000355500 MCM10Q7L590 875 aa9.91□□□□□ -0.82
COMMD9-202ENST00000355500 ZNF513Q8N8E2 541 aaPredicted RBP9.91□□□□□ -0.82
COMMD9-202ENST00000355500 IGSF5Q9NSI5 407 aa9.91□□□□□ -0.82
COMMD9-202ENST00000355500 ZC3H4Q9UPT8 1303 aaKnown RBP9.91□□□□□ -0.82
COMMD9-202ENST00000355500 HSP90AA1P07900 732 aaKnown RBP9.91□□□□□ -0.82
COMMD9-202ENST00000355500 NBPF9Q3BBW0 867 aa9.91□□□□□ -0.82
COMMD9-202ENST00000355500 KRBA2Q6ZNG9 492 aa9.91□□□□□ -0.82
COMMD9-202ENST00000355500 ATL2Q8NHH9 583 aa9.91□□□□□ -0.82
COMMD9-202ENST00000355500 GCP02774 474 aa9.91□□□□□ -0.82
COMMD9-202ENST00000355500 NBPF14Q5TI25 921 aa9.91□□□□□ -0.82
COMMD9-202ENST00000355500 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.91□□□□□ -0.82
COMMD9-202ENST00000355500 HMMRO75330 724 aa9.9□□□□□ -0.82
COMMD9-202ENST00000355500 GET4Q7L5D6 327 aaPredicted RBP9.9□□□□□ -0.82
COMMD9-202ENST00000355500 TSPAN18Q96SJ8 248 aa9.9□□□□□ -0.82
COMMD9-202ENST00000355500 STK31Q9BXU1 1019 aa9.9□□□□□ -0.82
COMMD9-202ENST00000355500 GOLGA6CA6NDK9 693 aa9.9□□□□□ -0.83
COMMD9-202ENST00000355500 GOLGA6BA6NDN3 693 aa9.9□□□□□ -0.83
COMMD9-202ENST00000355500 RAB11FIP3O75154 756 aa9.9□□□□□ -0.83
COMMD9-202ENST00000355500 GOLGA6DP0CG33 693 aa9.9□□□□□ -0.83
COMMD9-202ENST00000355500 DCTN1Q14203 1278 aa9.9□□□□□ -0.83
COMMD9-202ENST00000355500 FAM98CQ17RN3 349 aaKnown RBP9.9□□□□□ -0.83
COMMD9-202ENST00000355500 PLEKHO1Q53GL0 409 aaPredicted RBP9.9□□□□□ -0.83
COMMD9-202ENST00000355500 ARHGEF1Q92888 912 aaKnown RBP9.9□□□□□ -0.83
COMMD9-202ENST00000355500 GOLGA6AQ9NYA3 693 aa9.9□□□□□ -0.83
COMMD9-202ENST00000355500 SHANK3Q9BYB0 1731 aa9.89□□□□□ -0.83
COMMD9-202ENST00000355500 SIRT2Q8IXJ6 389 aa9.89□□□□□ -0.83
COMMD9-202ENST00000355500 CABLES1Q8TDN4 633 aa9.89□□□□□ -0.83
COMMD9-202ENST00000355500 ZNF500O60304 480 aaPredicted RBP9.89□□□□□ -0.83
COMMD9-202ENST00000355500 KIF4AO95239 1232 aa9.89□□□□□ -0.83
COMMD9-202ENST00000355500 GNAI3P08754 354 aa9.89□□□□□ -0.83
COMMD9-202ENST00000355500 SCP2P22307 547 aa9.89□□□□□ -0.83
COMMD9-202ENST00000355500 NKX1-1Q15270 411 aaPredicted RBP9.89□□□□□ -0.83
COMMD9-202ENST00000355500 HSP90AB3PQ58FF7 597 aa9.89□□□□□ -0.83
COMMD9-202ENST00000355500 OSBPL3Q9H4L5 887 aa9.89□□□□□ -0.83
COMMD9-202ENST00000355500 CICQ96RK0 1608 aaPredicted RBP9.88□□□□□ -0.83
COMMD9-202ENST00000355500 AOX1Q06278 1338 aa9.88□□□□□ -0.83
COMMD9-202ENST00000355500 PAX3P23760 479 aa9.88□□□□□ -0.83
COMMD9-202ENST00000355500 CEP85Q6P2H3 762 aa9.88□□□□□ -0.83
COMMD9-202ENST00000355500 IL17REQ8NFR9 667 aa9.88□□□□□ -0.83
COMMD9-202ENST00000355500 BTAF1O14981 1849 aa9.88□□□□□ -0.83
COMMD9-202ENST00000355500 SNX21Q969T3 373 aa9.88□□□□□ -0.83
COMMD9-202ENST00000355500 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.88□□□□□ -0.83
COMMD9-202ENST00000355500 CHD4Q14839 1912 aa9.88□□□□□ -0.83
COMMD9-202ENST00000355500 WDR70Q9NW82 654 aa9.87□□□□□ -0.83
COMMD9-202ENST00000355500 ERBB3P21860 1342 aa9.87□□□□□ -0.83
COMMD9-202ENST00000355500 EPB41L2O43491 1005 aaKnown RBP9.87□□□□□ -0.83
COMMD9-202ENST00000355500 CREBRFQ8IUR6 639 aa9.87□□□□□ -0.83
COMMD9-202ENST00000355500 ZBTB12Q9Y330 459 aaPredicted RBP9.87□□□□□ -0.83
COMMD9-202ENST00000355500 UBR2Q8IWV8 1755 aa9.87□□□□□ -0.83
COMMD9-202ENST00000355500 NBPF6Q5VWK0 638 aa9.86□□□□□ -0.83
COMMD9-202ENST00000355500 NBPF4Q96M43 638 aa9.86□□□□□ -0.83
COMMD9-202ENST00000355500 EIF4A1P60842 406 aaKnown RBP9.85□□□□□ -0.83
COMMD9-202ENST00000355500 FLIIQ13045 1269 aa9.85□□□□□ -0.83
COMMD9-202ENST00000355500 LONRF3Q496Y0 759 aa9.85□□□□□ -0.83
COMMD9-202ENST00000355500 NUTM2GQ5VZR2 741 aa9.85□□□□□ -0.83
COMMD9-202ENST00000355500 ZNF280DQ6N043 979 aa9.85□□□□□ -0.83
COMMD9-202ENST00000355500 DDX46Q7L014 1031 aaKnown RBP9.85□□□□□ -0.83
COMMD9-202ENST00000355500 GNAI2P04899 355 aa9.85□□□□□ -0.83
COMMD9-202ENST00000355500 EVA1CP58658 441 aa9.85□□□□□ -0.83
COMMD9-202ENST00000355500 CCDC181Q5TID7 509 aa9.85□□□□□ -0.83
COMMD9-202ENST00000355500 DEFB132Q7Z7B7 95 aa9.85□□□□□ -0.83
COMMD9-202ENST00000355500 C22orf23Q9BZE7 217 aa9.85□□□□□ -0.83
COMMD9-202ENST00000355500 C5P01031 1676 aa9.85□□□□□ -0.83
COMMD9-202ENST00000355500 GOLIM4O00461 696 aa9.84□□□□□ -0.83
COMMD9-202ENST00000355500 CDC45O75419 566 aa9.84□□□□□ -0.83
COMMD9-202ENST00000355500 PRR29P0C7W0 189 aa9.84□□□□□ -0.83
COMMD9-202ENST00000355500 ZC3H15Q8WU90 426 aaKnown RBP9.84□□□□□ -0.83
COMMD9-202ENST00000355500 COL15A1P39059 1388 aa9.84□□□□□ -0.83
COMMD9-202ENST00000355500 SEC24BO95487 1268 aa9.84□□□□□ -0.83
COMMD9-202ENST00000355500 TTC22Q5TAA0 569 aa9.84□□□□□ -0.83
COMMD9-202ENST00000355500 MAMSTRQ6ZN01 415 aa9.84□□□□□ -0.83
COMMD9-202ENST00000355500 ANKRD24Q8TF21 1146 aa9.84□□□□□ -0.83
COMMD9-202ENST00000355500 VTI1AQ96AJ9 217 aa9.84□□□□□ -0.83
COMMD9-202ENST00000355500 RNMTO43148 476 aaKnown RBP9.84□□□□□ -0.84
COMMD9-202ENST00000355500 ZFYVE27Q5T4F4 411 aa9.84□□□□□ -0.84
COMMD9-202ENST00000355500 ANKRD45Q5TZF3 282 aa9.84□□□□□ -0.84
COMMD9-202ENST00000355500 ELL2O00472 640 aaPredicted RBP9.83□□□□□ -0.84
COMMD9-202ENST00000355500 ERCC3P19447 782 aa9.83□□□□□ -0.84
COMMD9-202ENST00000355500 PLEKHM2Q8IWE5 1019 aa9.83□□□□□ -0.84
COMMD9-202ENST00000355500 IL17RAQ96F46 866 aa9.83□□□□□ -0.84
COMMD9-202ENST00000355500 SRCIN1Q9C0H9 1055 aa9.83□□□□□ -0.84
COMMD9-202ENST00000355500 SALL3Q9BXA9 1300 aa9.83□□□□□ -0.84
COMMD9-202ENST00000355500 KCNQ2O43526 872 aa9.83□□□□□ -0.84
COMMD9-202ENST00000355500 C1orf141Q5JVX7 400 aa9.83□□□□□ -0.84
COMMD9-202ENST00000355500 LARP1Q6PKG0 1096 aaKnown RBP9.83□□□□□ -0.84
COMMD9-202ENST00000355500 FAM43AQ8N2R8 423 aa9.83□□□□□ -0.84
COMMD9-202ENST00000355500 LNPKQ9C0E8 428 aa9.83□□□□□ -0.84
COMMD9-202ENST00000355500 ALDH1L1O75891 902 aa9.82□□□□□ -0.84
COMMD9-202ENST00000355500 ATP8B2P98198 1209 aa9.82□□□□□ -0.84
COMMD9-202ENST00000355500 EN1Q05925 392 aaPredicted RBP9.82□□□□□ -0.84
COMMD9-202ENST00000355500 SLC16A10Q8TF71 515 aa9.82□□□□□ -0.84
COMMD9-202ENST00000355500 HSP90AB1P08238 724 aaKnown RBP9.82□□□□□ -0.84
COMMD9-202ENST00000355500 MTX1Q13505 466 aa9.82□□□□□ -0.84
COMMD9-202ENST00000355500 DDB1Q16531 1140 aa9.82□□□□□ -0.84
COMMD9-202ENST00000355500 KRT24Q2M2I5 525 aa9.82□□□□□ -0.84
COMMD9-202ENST00000355500 ZNF530Q6P9A1 599 aaPredicted RBP9.82□□□□□ -0.84
COMMD9-202ENST00000355500 ANTXR1Q9H6X2 564 aa9.82□□□□□ -0.84
COMMD9-202ENST00000355500 SPON1Q9HCB6 807 aa9.82□□□□□ -0.84
COMMD9-202ENST00000355500 KLHL42Q9P2K6 505 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms