RNA–Protein interactions for RNA: ENST00000344576.6

EGFR-203, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-203ENST00000344576 SMC3Q9UQE7 1217 aa19.24■□□□□ 0.67
EGFR-203ENST00000344576 LSG1Q9H089 658 aaKnown RBP19.24■□□□□ 0.67
EGFR-203ENST00000344576 PRDM11Q9NQV5 511 aa19.24■□□□□ 0.67
EGFR-203ENST00000344576 SGSM2O43147 1006 aa19.23■□□□□ 0.67
EGFR-203ENST00000344576 CWC27Q6UX04 472 aaKnown RBP19.23■□□□□ 0.67
EGFR-203ENST00000344576 PI4K2BQ8TCG2 481 aa19.23■□□□□ 0.67
EGFR-203ENST00000344576 SLC39A6Q13433 755 aa19.23■□□□□ 0.67
EGFR-203ENST00000344576 USP44Q9H0E7 712 aa19.23■□□□□ 0.67
EGFR-203ENST00000344576 U2AF2P26368 475 aaKnown RBP eCLIP19.22■□□□□ 0.67
EGFR-203ENST00000344576 CHPF2Q9P2E5 772 aa19.22■□□□□ 0.67
EGFR-203ENST00000344576 IGSF3O75054 1194 aa19.22■□□□□ 0.67
EGFR-203ENST00000344576 CASTP20810 708 aaKnown RBP19.22■□□□□ 0.67
EGFR-203ENST00000344576 GJB2P29033 226 aa19.22■□□□□ 0.67
EGFR-203ENST00000344576 LIMCH1Q9UPQ0 1083 aa19.22■□□□□ 0.67
EGFR-203ENST00000344576 SURF6O75683 361 aaKnown RBP19.22■□□□□ 0.67
EGFR-203ENST00000344576 LETM1O95202 739 aaPredicted RBP19.22■□□□□ 0.67
EGFR-203ENST00000344576 PDCL2Q8N4E4 241 aa19.22■□□□□ 0.67
EGFR-203ENST00000344576 SOS1Q07889 1333 aaPredicted RBP19.21■□□□□ 0.67
EGFR-203ENST00000344576 MTMR6Q9Y217 621 aa19.21■□□□□ 0.67
EGFR-203ENST00000344576 SOS2Q07890 1332 aaPredicted RBP19.21■□□□□ 0.67
EGFR-203ENST00000344576 VPS37CA5D8V6 355 aaPredicted RBP19.21■□□□□ 0.67
EGFR-203ENST00000344576 ADCK5Q3MIX3 580 aa19.21■□□□□ 0.67
EGFR-203ENST00000344576 UTP14CQ5TAP6 766 aaKnown RBP19.21■□□□□ 0.67
EGFR-203ENST00000344576 FAM173BQ6P4H8 233 aa19.21■□□□□ 0.67
EGFR-203ENST00000344576 KDM3BQ7LBC6 1761 aa19.21■□□□□ 0.67
EGFR-203ENST00000344576 TATP17735 454 aaPredicted RBP19.2■□□□□ 0.66
EGFR-203ENST00000344576 PTGS1P23219 599 aa19.2■□□□□ 0.66
EGFR-203ENST00000344576 STRN4Q9NRL3 753 aa19.2■□□□□ 0.66
EGFR-203ENST00000344576 ST3GAL1Q11201 340 aa19.2■□□□□ 0.66
EGFR-203ENST00000344576 COL9A3Q14050 684 aaPredicted RBP19.2■□□□□ 0.66
EGFR-203ENST00000344576 CAMK4Q16566 473 aa19.2■□□□□ 0.66
EGFR-203ENST00000344576 PPP1R42Q7Z4L9 355 aa19.2■□□□□ 0.66
EGFR-203ENST00000344576 UBTFL1P0CB47 393 aaPredicted RBP19.19■□□□□ 0.66
EGFR-203ENST00000344576 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.19■□□□□ 0.66
EGFR-203ENST00000344576 KDM6AO15550 1401 aaPredicted RBP19.19■□□□□ 0.66
EGFR-203ENST00000344576 NECAB1Q8N987 351 aa19.19■□□□□ 0.66
EGFR-203ENST00000344576 BCL11BQ9C0K0 894 aaPredicted RBP19.19■□□□□ 0.66
EGFR-203ENST00000344576 PROSER3Q2NL68 480 aa19.18■□□□□ 0.66
EGFR-203ENST00000344576 FERMT3Q86UX7 667 aa19.18■□□□□ 0.66
EGFR-203ENST00000344576 RHPN1Q8TCX5 695 aa19.18■□□□□ 0.66
EGFR-203ENST00000344576 PTH1RQ03431 593 aa19.18■□□□□ 0.66
EGFR-203ENST00000344576 LRMPQ12912 555 aa19.18■□□□□ 0.66
EGFR-203ENST00000344576 HYPKQ9NX55 129 aa19.18■□□□□ 0.66
EGFR-203ENST00000344576 CYP27B1O15528 508 aa19.18■□□□□ 0.66
EGFR-203ENST00000344576 PHKG2P15735 406 aa19.18■□□□□ 0.66
EGFR-203ENST00000344576 TOM1L2Q6ZVM7 507 aa19.18■□□□□ 0.66
EGFR-203ENST00000344576 LUZP1Q86V48 1076 aa19.18■□□□□ 0.66
EGFR-203ENST00000344576 SSH3Q8TE77 659 aa19.17■□□□□ 0.66
EGFR-203ENST00000344576 AOX1Q06278 1338 aa19.17■□□□□ 0.66
EGFR-203ENST00000344576 LIG1P18858 919 aa19.17■□□□□ 0.66
EGFR-203ENST00000344576 NFATC2IPQ8NCF5 419 aa19.17■□□□□ 0.66
EGFR-203ENST00000344576 TTC6Q86TZ1 520 aa19.16■□□□□ 0.66
EGFR-203ENST00000344576 JAKMIP1Q96N16 626 aaKnown RBP19.16■□□□□ 0.66
EGFR-203ENST00000344576 NRBP1Q9UHY1 535 aa19.16■□□□□ 0.66
EGFR-203ENST00000344576 PRPF40BQ6NWY9 871 aaKnown RBP19.16■□□□□ 0.66
EGFR-203ENST00000344576 CKAP2LQ8IYA6 745 aa19.16■□□□□ 0.66
EGFR-203ENST00000344576 CPDO75976 1380 aa19.15■□□□□ 0.66
EGFR-203ENST00000344576 ANKRD7Q92527 254 aa19.15■□□□□ 0.66
EGFR-203ENST00000344576 BABAM1Q9NWV8 329 aa19.15■□□□□ 0.66
EGFR-203ENST00000344576 SRGAP3O43295 1099 aa19.15■□□□□ 0.66
EGFR-203ENST00000344576 PIP4K2AP48426 406 aaPredicted RBP19.15■□□□□ 0.66
EGFR-203ENST00000344576 CHAF1AQ13111 956 aaPredicted RBP19.15■□□□□ 0.66
EGFR-203ENST00000344576 NAA30Q147X3 362 aaPredicted RBP19.15■□□□□ 0.66
EGFR-203ENST00000344576 DIAPH3Q9NSV4 1193 aa19.15■□□□□ 0.66
EGFR-203ENST00000344576 ATP6V1DQ9Y5K8 247 aa19.15■□□□□ 0.66
EGFR-203ENST00000344576 ME3Q16798 604 aa19.15■□□□□ 0.66
EGFR-203ENST00000344576 MRVI1Q9Y6F6 885 aa19.15■□□□□ 0.66
EGFR-203ENST00000344576 NBPF7P0C2Y1 421 aaPredicted RBP19.14■□□□□ 0.65
EGFR-203ENST00000344576 CCDC192P0DO97 292 aa19.14■□□□□ 0.65
EGFR-203ENST00000344576 CNTROBQ8N137 903 aa19.14■□□□□ 0.65
EGFR-203ENST00000344576 C16orf45Q96MC5 204 aaPredicted RBP19.14■□□□□ 0.65
EGFR-203ENST00000344576 PDRG1Q9NUG6 133 aa19.14■□□□□ 0.65
EGFR-203ENST00000344576 LARP1Q6PKG0 1096 aaKnown RBP19.14■□□□□ 0.65
EGFR-203ENST00000344576 CCDC186Q7Z3E2 898 aa19.14■□□□□ 0.65
EGFR-203ENST00000344576 A0A0U1RQG5 324 aaPredicted RBP19.13■□□□□ 0.65
EGFR-203ENST00000344576 CDC37L1Q7L3B6 337 aa19.13■□□□□ 0.65
EGFR-203ENST00000344576 GIGYF1O75420 1035 aaPredicted RBP19.13■□□□□ 0.65
EGFR-203ENST00000344576 ABCA3Q99758 1704 aa19.13■□□□□ 0.65
EGFR-203ENST00000344576 CTIFO43310 598 aaKnown RBP19.12■□□□□ 0.65
EGFR-203ENST00000344576 TYRO3Q06418 890 aa19.12■□□□□ 0.65
EGFR-203ENST00000344576 NCBP1Q09161 790 aaKnown RBP19.12■□□□□ 0.65
EGFR-203ENST00000344576 TCEANC2Q96MN5 208 aa19.12■□□□□ 0.65
EGFR-203ENST00000344576 SLC52A2Q9HAB3 445 aa19.12■□□□□ 0.65
EGFR-203ENST00000344576 PI4KAP2A4QPH2 592 aa19.12■□□□□ 0.65
EGFR-203ENST00000344576 EPB41L2O43491 1005 aaKnown RBP19.12■□□□□ 0.65
EGFR-203ENST00000344576 PI4KAP1Q8N8J0 262 aa19.12■□□□□ 0.65
EGFR-203ENST00000344576 FAM200AQ8TCP9 573 aa19.12■□□□□ 0.65
EGFR-203ENST00000344576 PODXL2Q9NZ53 605 aa19.12■□□□□ 0.65
EGFR-203ENST00000344576 COL5A2P05997 1499 aaPredicted RBP19.12■□□□□ 0.65
EGFR-203ENST00000344576 SIPA1L3O60292 1781 aaPredicted RBP19.12■□□□□ 0.65
EGFR-203ENST00000344576 N4BP2Q86UW6 1770 aaPredicted RBP19.12■□□□□ 0.65
EGFR-203ENST00000344576 POLA2Q14181 598 aa19.11■□□□□ 0.65
EGFR-203ENST00000344576 IFNL2Q8IZJ0 200 aa19.11■□□□□ 0.65
EGFR-203ENST00000344576 WDR17Q8IZU2 1322 aa19.11■□□□□ 0.65
EGFR-203ENST00000344576 GTPBP4Q9BZE4 634 aaKnown RBP19.11■□□□□ 0.65
EGFR-203ENST00000344576 ANO6Q4KMQ2 910 aa19.11■□□□□ 0.65
EGFR-203ENST00000344576 NUP62CLQ9H1M0 184 aa19.11■□□□□ 0.65
EGFR-203ENST00000344576 CACNA1FO60840 1977 aa19.1■□□□□ 0.65
EGFR-203ENST00000344576 GOLGA6L6A8MZA4 724 aa19.1■□□□□ 0.65
EGFR-203ENST00000344576 AIMP1Q12904 312 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms