RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 TMPOP42166 694 aaKnown RBP17.11■□□□□ 0.33
NECTIN1-203ENST00000341398 SUSD4Q5VX71 490 aa17.11■□□□□ 0.33
NECTIN1-203ENST00000341398 OLFM4Q6UX06 510 aa17.11■□□□□ 0.33
NECTIN1-203ENST00000341398 PNMA8AQ86V59 439 aaPredicted RBP17.11■□□□□ 0.33
NECTIN1-203ENST00000341398 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
NECTIN1-203ENST00000341398 CRAMP1Q96RY5 1269 aa17.11■□□□□ 0.33
NECTIN1-203ENST00000341398 TAF1DQ9H5J8 278 aaPredicted RBP17.11■□□□□ 0.33
NECTIN1-203ENST00000341398 CLEC11AQ9Y240 323 aa17.11■□□□□ 0.33
NECTIN1-203ENST00000341398 RIC1Q4ADV7 1423 aa17.1■□□□□ 0.33
NECTIN1-203ENST00000341398 FZD9O00144 591 aa17.1■□□□□ 0.33
NECTIN1-203ENST00000341398 EIF6P56537 245 aaKnown RBP17.1■□□□□ 0.33
NECTIN1-203ENST00000341398 EAPPQ56P03 285 aaPredicted RBP17.1■□□□□ 0.33
NECTIN1-203ENST00000341398 HSP90AB3PQ58FF7 597 aa17.09■□□□□ 0.33
NECTIN1-203ENST00000341398 GPC2Q8N158 579 aa17.09■□□□□ 0.33
NECTIN1-203ENST00000341398 UTP14AQ9BVJ6 771 aaKnown RBP17.09■□□□□ 0.33
NECTIN1-203ENST00000341398 UBN2Q6ZU65 1347 aa17.09■□□□□ 0.33
NECTIN1-203ENST00000341398 ABCC12Q96J65 1359 aa17.08■□□□□ 0.33
NECTIN1-203ENST00000341398 POTEIP0CG38 1075 aa17.08■□□□□ 0.32
NECTIN1-203ENST00000341398 POTEJP0CG39 1038 aa17.08■□□□□ 0.32
NECTIN1-203ENST00000341398 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.32
NECTIN1-203ENST00000341398 WDR43Q15061 677 aaKnown RBP eCLIP17.08■□□□□ 0.32
NECTIN1-203ENST00000341398 MYBBP1AQ9BQG0 1328 aaKnown RBP17.08■□□□□ 0.32
NECTIN1-203ENST00000341398 ZNF541Q9H0D2 1346 aa17.08■□□□□ 0.32
NECTIN1-203ENST00000341398 PPEF1O14829 653 aaPredicted RBP17.07■□□□□ 0.32
NECTIN1-203ENST00000341398 NTSR2O95665 410 aa17.07■□□□□ 0.32
NECTIN1-203ENST00000341398 EPHX2P34913 555 aa17.07■□□□□ 0.32
NECTIN1-203ENST00000341398 NEUROD2Q15784 382 aa17.07■□□□□ 0.32
NECTIN1-203ENST00000341398 RNF123Q5XPI4 1314 aa17.07■□□□□ 0.32
NECTIN1-203ENST00000341398 HSPA1AP0DMV8 641 aaKnown RBP17.06■□□□□ 0.32
NECTIN1-203ENST00000341398 HSPA1BP0DMV9 641 aaKnown RBP17.06■□□□□ 0.32
NECTIN1-203ENST00000341398 LMOD1P29536 600 aaPredicted RBP17.06■□□□□ 0.32
NECTIN1-203ENST00000341398 PDIA6Q15084 440 aa17.06■□□□□ 0.32
NECTIN1-203ENST00000341398 SLC10A5Q5PT55 438 aa17.06■□□□□ 0.32
NECTIN1-203ENST00000341398 LARGE2Q8N3Y3 721 aa17.06■□□□□ 0.32
NECTIN1-203ENST00000341398 TCERG1O14776 1098 aaKnown RBP17.05■□□□□ 0.32
NECTIN1-203ENST00000341398 AIMP1Q12904 312 aaKnown RBP17.05■□□□□ 0.32
NECTIN1-203ENST00000341398 COPS6Q7L5N1 327 aa17.05■□□□□ 0.32
NECTIN1-203ENST00000341398 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
NECTIN1-203ENST00000341398 VPS33BQ9H267 617 aa17.05■□□□□ 0.32
NECTIN1-203ENST00000341398 LAS1LQ9Y4W2 734 aaKnown RBP17.05■□□□□ 0.32
NECTIN1-203ENST00000341398 GJA3Q9Y6H8 435 aa17.05■□□□□ 0.32
NECTIN1-203ENST00000341398 TMEM88BA6NKF7 163 aa17.04■□□□□ 0.32
NECTIN1-203ENST00000341398 CCDC146Q8IYE0 955 aa17.04■□□□□ 0.32
NECTIN1-203ENST00000341398 SUPT20HQ8NEM7 779 aa17.04■□□□□ 0.32
NECTIN1-203ENST00000341398 NECTIN2Q92692 538 aa17.04■□□□□ 0.32
NECTIN1-203ENST00000341398 DDX21Q9NR30 783 aaKnown RBP eCLIP17.04■□□□□ 0.32
NECTIN1-203ENST00000341398 MKRN1Q9UHC7 482 aaKnown RBP17.04■□□□□ 0.32
NECTIN1-203ENST00000341398 CHL1O00533 1208 aa17.03■□□□□ 0.32
NECTIN1-203ENST00000341398 BBOX1O75936 387 aa17.03■□□□□ 0.32
NECTIN1-203ENST00000341398 ANXA1P04083 346 aa17.03■□□□□ 0.32
NECTIN1-203ENST00000341398 LRP10Q7Z4F1 713 aa17.03■□□□□ 0.32
NECTIN1-203ENST00000341398 NIM1KQ8IY84 436 aa17.03■□□□□ 0.32
NECTIN1-203ENST00000341398 XAGE3Q8WTP9 111 aa17.03■□□□□ 0.32
NECTIN1-203ENST00000341398 PASKQ96RG2 1323 aa17.03■□□□□ 0.32
NECTIN1-203ENST00000341398 ITGBL1O95965 494 aaPredicted RBP17.02■□□□□ 0.32
NECTIN1-203ENST00000341398 TCIRG1Q13488 830 aa17.02■□□□□ 0.32
NECTIN1-203ENST00000341398 PROSER3Q2NL68 480 aa17.02■□□□□ 0.32
NECTIN1-203ENST00000341398 CNTROBQ8N137 903 aa17.02■□□□□ 0.32
NECTIN1-203ENST00000341398 TRMT112Q9UI30 125 aaKnown RBP17.02■□□□□ 0.32
NECTIN1-203ENST00000341398 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
NECTIN1-203ENST00000341398 ANKRD36CQ5JPF3 1778 aa17.02■□□□□ 0.31
NECTIN1-203ENST00000341398 PPIP5K2O43314 1243 aa17.02■□□□□ 0.31
NECTIN1-203ENST00000341398 DDX46Q7L014 1031 aaKnown RBP17.02■□□□□ 0.31
NECTIN1-203ENST00000341398 SNED1Q8TER0 1413 aa17.01■□□□□ 0.31
NECTIN1-203ENST00000341398 HOXB7P09629 217 aa17.01■□□□□ 0.31
NECTIN1-203ENST00000341398 NLRP10Q86W26 655 aa17.01■□□□□ 0.31
NECTIN1-203ENST00000341398 CNTNAP1P78357 1384 aa17■□□□□ 0.31
NECTIN1-203ENST00000341398 SH3TC1Q8TE82 1336 aa17■□□□□ 0.31
NECTIN1-203ENST00000341398 HDGFL1Q5TGJ6 251 aa17■□□□□ 0.31
NECTIN1-203ENST00000341398 MAP1SQ66K74 1059 aaPredicted RBP17■□□□□ 0.31
NECTIN1-203ENST00000341398 C3orf67Q6ZVT6 689 aa17■□□□□ 0.31
NECTIN1-203ENST00000341398 SP8Q8IXZ3 490 aa17■□□□□ 0.31
NECTIN1-203ENST00000341398 DBF4Q9UBU7 674 aaPredicted RBP17■□□□□ 0.31
NECTIN1-203ENST00000341398 ADAMTS8Q9UP79 889 aa17■□□□□ 0.31
NECTIN1-203ENST00000341398 ABCC4O15439 1325 aa16.99■□□□□ 0.31
NECTIN1-203ENST00000341398 HCLS1P14317 486 aaPredicted RBP16.99■□□□□ 0.31
NECTIN1-203ENST00000341398 DPP8Q6V1X1 898 aaPredicted RBP16.99■□□□□ 0.31
NECTIN1-203ENST00000341398 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
NECTIN1-203ENST00000341398 USP50Q70EL3 339 aaPredicted RBP16.99■□□□□ 0.31
NECTIN1-203ENST00000341398 MPNDQ8N594 471 aa16.99■□□□□ 0.31
NECTIN1-203ENST00000341398 TRIM35Q9UPQ4 493 aa16.99■□□□□ 0.31
NECTIN1-203ENST00000341398 AOC3Q16853 763 aa16.98■□□□□ 0.31
NECTIN1-203ENST00000341398 DEFB115Q30KQ5 88 aa16.98■□□□□ 0.31
NECTIN1-203ENST00000341398 TMC4Q7Z404 712 aa16.98■□□□□ 0.31
NECTIN1-203ENST00000341398 PLBD2Q8NHP8 589 aa16.98■□□□□ 0.31
NECTIN1-203ENST00000341398 AIDAQ96BJ3 306 aa16.98■□□□□ 0.31
NECTIN1-203ENST00000341398 CFAP44Q96MT7 982 aa16.98■□□□□ 0.31
NECTIN1-203ENST00000341398 HYPKQ9NX55 129 aa16.98■□□□□ 0.31
NECTIN1-203ENST00000341398 CHPF2Q9P2E5 772 aa16.98■□□□□ 0.31
NECTIN1-203ENST00000341398 ZNRF3Q9ULT6 936 aa16.98■□□□□ 0.31
NECTIN1-203ENST00000341398 ADAMTSL1Q8N6G6 1762 aa16.97■□□□□ 0.31
NECTIN1-203ENST00000341398 RTFDC1Q9BY42 306 aaPredicted RBP16.97■□□□□ 0.31
NECTIN1-203ENST00000341398 LAMB2P55268 1798 aa16.96■□□□□ 0.31
NECTIN1-203ENST00000341398 SLC34A2O95436 690 aa16.96■□□□□ 0.31
NECTIN1-203ENST00000341398 EPS15P42566 896 aa16.96■□□□□ 0.31
NECTIN1-203ENST00000341398 VEGFBP49765 207 aa16.96■□□□□ 0.31
NECTIN1-203ENST00000341398 SCNN1DP51172 638 aa16.96■□□□□ 0.31
NECTIN1-203ENST00000341398 CALD1Q05682 793 aaKnown RBP16.96■□□□□ 0.31
NECTIN1-203ENST00000341398 GRAPQ13588 217 aa16.96■□□□□ 0.31
NECTIN1-203ENST00000341398 KRT24Q2M2I5 525 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms