RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PATL2C9JE40 543 aaKnown RBP13.4□□□□□ -0.26
TPM3-207ENST00000341372 STARD3NLO95772 234 aa13.4□□□□□ -0.26
TPM3-207ENST00000341372 SCN7AQ01118 1682 aa13.4□□□□□ -0.26
TPM3-207ENST00000341372 COL15A1P39059 1388 aa13.4□□□□□ -0.26
TPM3-207ENST00000341372 APAF1O14727 1248 aa13.4□□□□□ -0.26
TPM3-207ENST00000341372 BRD1O95696 1058 aa13.4□□□□□ -0.26
TPM3-207ENST00000341372 SNRPA1P09661 255 aaKnown RBP13.4□□□□□ -0.26
TPM3-207ENST00000341372 POLD1P28340 1107 aa13.4□□□□□ -0.26
TPM3-207ENST00000341372 EIF4A1P60842 406 aaKnown RBP13.39□□□□□ -0.27
TPM3-207ENST00000341372 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
TPM3-207ENST00000341372 PPP1R1BQ9UD71 204 aaPredicted RBP13.39□□□□□ -0.27
TPM3-207ENST00000341372 USP42Q9H9J4 1324 aaKnown RBP13.39□□□□□ -0.27
TPM3-207ENST00000341372 BCORQ6W2J9 1755 aa13.38□□□□□ -0.27
TPM3-207ENST00000341372 EIF5P55010 431 aaKnown RBP13.38□□□□□ -0.27
TPM3-207ENST00000341372 CCDC27Q2M243 656 aa13.38□□□□□ -0.27
TPM3-207ENST00000341372 MSL1Q68DK7 614 aa13.38□□□□□ -0.27
TPM3-207ENST00000341372 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
TPM3-207ENST00000341372 CHL1O00533 1208 aa13.37□□□□□ -0.27
TPM3-207ENST00000341372 GYS1P13807 737 aa13.37□□□□□ -0.27
TPM3-207ENST00000341372 RFC4P35249 363 aa13.37□□□□□ -0.27
TPM3-207ENST00000341372 GPHNQ9NQX3 736 aaPredicted RBP13.37□□□□□ -0.27
TPM3-207ENST00000341372 TSPYL4Q9UJ04 414 aa13.37□□□□□ -0.27
TPM3-207ENST00000341372 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
TPM3-207ENST00000341372 KIF13BQ9NQT8 1826 aa13.37□□□□□ -0.27
TPM3-207ENST00000341372 GIGYF1O75420 1035 aaPredicted RBP13.37□□□□□ -0.27
TPM3-207ENST00000341372 IL6STP40189 918 aaPredicted RBP13.37□□□□□ -0.27
TPM3-207ENST00000341372 PDE4CQ08493 712 aa13.37□□□□□ -0.27
TPM3-207ENST00000341372 NLGN1Q8N2Q7 840 aa13.36□□□□□ -0.27
TPM3-207ENST00000341372 CARNS1A5YM72 827 aa13.35□□□□□ -0.27
TPM3-207ENST00000341372 UNCXA6NJT0 531 aa13.35□□□□□ -0.27
TPM3-207ENST00000341372 ZNF853P0CG23 659 aa13.35□□□□□ -0.27
TPM3-207ENST00000341372 CALR3Q96L12 384 aaKnown RBP13.35□□□□□ -0.27
TPM3-207ENST00000341372 CHMP4AQ9BY43 222 aa13.35□□□□□ -0.27
TPM3-207ENST00000341372 FHDC1Q9C0D6 1143 aaPredicted RBP13.35□□□□□ -0.27
TPM3-207ENST00000341372 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
TPM3-207ENST00000341372 NARFQ9UHQ1 456 aa13.35□□□□□ -0.27
TPM3-207ENST00000341372 A1BGP04217 495 aa13.35□□□□□ -0.27
TPM3-207ENST00000341372 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
TPM3-207ENST00000341372 SRP68Q9UHB9 627 aaKnown RBP13.35□□□□□ -0.27
TPM3-207ENST00000341372 NRXN2Q9P2S2 1712 aa13.34□□□□□ -0.27
TPM3-207ENST00000341372 A0A087WZG4 1122 aa13.34□□□□□ -0.27
TPM3-207ENST00000341372 CCER2I3L3R5 266 aa13.34□□□□□ -0.27
TPM3-207ENST00000341372 OSBPP22059 807 aa13.34□□□□□ -0.27
TPM3-207ENST00000341372 CALD1Q05682 793 aaKnown RBP13.34□□□□□ -0.27
TPM3-207ENST00000341372 SYT17Q9BSW7 474 aa13.34□□□□□ -0.27
TPM3-207ENST00000341372 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.34□□□□□ -0.27
TPM3-207ENST00000341372 TMUB1Q9BVT8 246 aa13.34□□□□□ -0.27
TPM3-207ENST00000341372 IFT57Q9NWB7 429 aa13.34□□□□□ -0.27
TPM3-207ENST00000341372 ERBB4Q15303 1308 aa13.34□□□□□ -0.27
TPM3-207ENST00000341372 KIAA1551Q9HCM1 1747 aa13.33□□□□□ -0.28
TPM3-207ENST00000341372 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
TPM3-207ENST00000341372 MMP10P09238 476 aa13.33□□□□□ -0.28
TPM3-207ENST00000341372 NBPF10Q6P3W6 841 aaKnown RBP13.33□□□□□ -0.28
TPM3-207ENST00000341372 NBPF15Q8N660 670 aa13.33□□□□□ -0.28
TPM3-207ENST00000341372 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.28
TPM3-207ENST00000341372 C10orf71Q711Q0 1435 aa13.32□□□□□ -0.28
TPM3-207ENST00000341372 USPL1Q5W0Q7 1092 aa13.32□□□□□ -0.28
TPM3-207ENST00000341372 ZPR1O75312 459 aa13.32□□□□□ -0.28
TPM3-207ENST00000341372 FAM177A1Q8N128 213 aaPredicted RBP13.32□□□□□ -0.28
TPM3-207ENST00000341372 CD2APQ9Y5K6 639 aa13.32□□□□□ -0.28
TPM3-207ENST00000341372 AFDNP55196 1824 aaKnown RBP13.32□□□□□ -0.28
TPM3-207ENST00000341372 POM121CA8CG34 1229 aa13.31□□□□□ -0.28
TPM3-207ENST00000341372 HOXB7P09629 217 aa13.31□□□□□ -0.28
TPM3-207ENST00000341372 GNAI1P63096 354 aa13.31□□□□□ -0.28
TPM3-207ENST00000341372 DSG2Q14126 1118 aa13.31□□□□□ -0.28
TPM3-207ENST00000341372 WWC1Q8IX03 1113 aa13.31□□□□□ -0.28
TPM3-207ENST00000341372 NGEFQ8N5V2 710 aa13.31□□□□□ -0.28
TPM3-207ENST00000341372 GLMNQ92990 594 aa13.31□□□□□ -0.28
TPM3-207ENST00000341372 GDPD2Q9HCC8 539 aa13.31□□□□□ -0.28
TPM3-207ENST00000341372 MBIPQ9NS73 344 aa13.31□□□□□ -0.28
TPM3-207ENST00000341372 IVNS1ABPQ9Y6Y0 642 aa13.31□□□□□ -0.28
TPM3-207ENST00000341372 IL16Q14005 1332 aa13.3□□□□□ -0.28
TPM3-207ENST00000341372 CAMTA2O94983 1202 aa13.3□□□□□ -0.28
TPM3-207ENST00000341372 TM4SF1P30408 202 aa13.3□□□□□ -0.28
TPM3-207ENST00000341372 FAM9BQ8IZU0 186 aa13.3□□□□□ -0.28
TPM3-207ENST00000341372 PIP4K2AP48426 406 aaPredicted RBP13.3□□□□□ -0.28
TPM3-207ENST00000341372 DDR1Q08345 913 aa13.3□□□□□ -0.28
TPM3-207ENST00000341372 POLRMTO00411 1230 aaKnown RBP13.29□□□□□ -0.28
TPM3-207ENST00000341372 LRP10Q7Z4F1 713 aa13.29□□□□□ -0.28
TPM3-207ENST00000341372 LAS1LQ9Y4W2 734 aaKnown RBP13.29□□□□□ -0.28
TPM3-207ENST00000341372 NFIXQ14938 502 aa13.29□□□□□ -0.28
TPM3-207ENST00000341372 KRT24Q2M2I5 525 aa13.29□□□□□ -0.28
TPM3-207ENST00000341372 SND1Q7KZF4 910 aaKnown RBP eCLIP13.29□□□□□ -0.28
TPM3-207ENST00000341372 DZIP3Q86Y13 1208 aaKnown RBP13.29□□□□□ -0.28
TPM3-207ENST00000341372 IGSF5Q9NSI5 407 aa13.29□□□□□ -0.28
TPM3-207ENST00000341372 TBC1D2BQ9UPU7 963 aa13.29□□□□□ -0.28
TPM3-207ENST00000341372 NLGN2Q8NFZ4 835 aa13.28□□□□□ -0.28
TPM3-207ENST00000341372 PBXIP1Q96AQ6 731 aa13.28□□□□□ -0.28
TPM3-207ENST00000341372 PARP3Q9Y6F1 533 aa13.28□□□□□ -0.28
TPM3-207ENST00000341372 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.27□□□□□ -0.28
TPM3-207ENST00000341372 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.28
TPM3-207ENST00000341372 USTQ9Y2C2 406 aa13.27□□□□□ -0.28
TPM3-207ENST00000341372 NUP98P52948 1817 aa13.27□□□□□ -0.28
TPM3-207ENST00000341372 PXDNLA1KZ92 1463 aa13.27□□□□□ -0.29
TPM3-207ENST00000341372 CLEC4GQ6UXB4 293 aa13.27□□□□□ -0.29
TPM3-207ENST00000341372 WDR63Q8IWG1 891 aa13.27□□□□□ -0.29
TPM3-207ENST00000341372 ZNF521Q96K83 1311 aa13.26□□□□□ -0.29
TPM3-207ENST00000341372 BEGAINQ9BUH8 593 aa13.26□□□□□ -0.29
TPM3-207ENST00000341372 DUSP27Q5VZP5 1158 aa13.25□□□□□ -0.29
TPM3-207ENST00000341372 TBC1D9BQ66K14 1250 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms