RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 U2AF1Q01081 240 aaKnown RBP eCLIP6.09□□□□□ -1.443e-6■□□□□ 8.2
MSL1-201ENST00000339569 VRTNQ9H8Y1 702 aa6.09□□□□□ -1.44
MSL1-201ENST00000339569 HDAC5Q9UQL6 1122 aa6.09□□□□□ -1.44
MSL1-201ENST00000339569 RIPK4P57078 832 aa6.08□□□□□ -1.44
MSL1-201ENST00000339569 GRIPAP1Q4V328 841 aa6.08□□□□□ -1.44
MSL1-201ENST00000339569 PMFBP1Q8TBY8 1022 aa6.08□□□□□ -1.44
MSL1-201ENST00000339569 SPG7Q9UQ90 795 aa6.08□□□□□ -1.44
MSL1-201ENST00000339569 ZNF335Q9H4Z2 1342 aaPredicted RBP6.08□□□□□ -1.44
MSL1-201ENST00000339569 TAF7Q15545 349 aaPredicted RBP6.08□□□□□ -1.44
MSL1-201ENST00000339569 DCAF5Q96JK2 942 aa6.08□□□□□ -1.44
MSL1-201ENST00000339569 PHOX2BQ99453 314 aa6.08□□□□□ -1.44
MSL1-201ENST00000339569 BTAF1O14981 1849 aa6.08□□□□□ -1.44
MSL1-201ENST00000339569 MTX1Q13505 466 aa6.08□□□□□ -1.44
MSL1-201ENST00000339569 ESCO1Q5FWF5 840 aa6.08□□□□□ -1.44
MSL1-201ENST00000339569 UPF1Q92900 1129 aaKnown RBP eCLIP6.08□□□□□ -1.442e-7■□□□□ 10.2
MSL1-201ENST00000339569 C8orf37Q96NL8 207 aa6.08□□□□□ -1.44
MSL1-201ENST00000339569 DDX19BQ9UMR2 479 aa6.08□□□□□ -1.44
MSL1-201ENST00000339569 DLEC1Q9Y238 1755 aa6.08□□□□□ -1.44
MSL1-201ENST00000339569 RFX7Q2KHR2 1363 aa6.07□□□□□ -1.44
MSL1-201ENST00000339569 TOM1O60784 492 aa6.07□□□□□ -1.44
MSL1-201ENST00000339569 HELBQ8NG08 1087 aaPredicted RBP6.07□□□□□ -1.44
MSL1-201ENST00000339569 RYDENQ9NUL5 291 aaKnown RBP6.07□□□□□ -1.44
MSL1-201ENST00000339569 USP42Q9H9J4 1324 aaKnown RBP6.07□□□□□ -1.44
MSL1-201ENST00000339569 TCERG1O14776 1098 aaKnown RBP6.07□□□□□ -1.44
MSL1-201ENST00000339569 MVPQ14764 893 aaKnown RBP6.07□□□□□ -1.44
MSL1-201ENST00000339569 TCEAL1Q15170 157 aa6.07□□□□□ -1.44
MSL1-201ENST00000339569 ZKSCAN2Q63HK3 967 aa6.07□□□□□ -1.44
MSL1-201ENST00000339569 EGFLAMQ63HQ2 1017 aa6.07□□□□□ -1.44
MSL1-201ENST00000339569 REM2Q8IYK8 340 aaPredicted RBP6.07□□□□□ -1.44
MSL1-201ENST00000339569 RASEFQ8IZ41 740 aa6.07□□□□□ -1.44
MSL1-201ENST00000339569 ORAI2Q96SN7 254 aa6.07□□□□□ -1.44
MSL1-201ENST00000339569 G3BP2Q9UN86 482 aaKnown RBP6.07□□□□□ -1.44
MSL1-201ENST00000339569 FAN1Q9Y2M0 1017 aa6.07□□□□□ -1.44
MSL1-201ENST00000339569 SSUH2Q9Y2M2 353 aa6.07□□□□□ -1.44
MSL1-201ENST00000339569 NUP98P52948 1817 aa6.07□□□□□ -1.44
MSL1-201ENST00000339569 KIF13BQ9NQT8 1826 aa6.07□□□□□ -1.44
MSL1-201ENST00000339569 DOCK2Q92608 1830 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 CCDC194A0A1B0GVG4 234 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 RNMTO43148 476 aaKnown RBP6.06□□□□□ -1.44
MSL1-201ENST00000339569 CANXP27824 592 aaKnown RBP6.06□□□□□ -1.44
MSL1-201ENST00000339569 SERPINB4P48594 390 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 SETQ01105 290 aaPredicted RBP6.06□□□□□ -1.44
MSL1-201ENST00000339569 TSR1Q2NL82 804 aaKnown RBP6.06□□□□□ -1.44
MSL1-201ENST00000339569 ANKRD24Q8TF21 1146 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 TEX13AQ9BXU3 409 aaPredicted RBP6.06□□□□□ -1.44
MSL1-201ENST00000339569 USTQ9Y2C2 406 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 BCL9LQ86UU0 1499 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 MAST2Q6P0Q8 1798 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 SPDYE2BA6NHP3 402 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 SPDYE6P0CI01 402 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 MTHFSDQ2M296 383 aaKnown RBP6.06□□□□□ -1.44
MSL1-201ENST00000339569 SPDYE2Q495Y8 402 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 HSP90AB2PQ58FF8 381 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 ATF7IPQ6VMQ6 1270 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 NPAS4Q8IUM7 802 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 STAG1Q8WVM7 1258 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 PHACTR3Q96KR7 559 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.06□□□□□ -1.44
MSL1-201ENST00000339569 IQSEC3Q9UPP2 1182 aaPredicted RBP6.06□□□□□ -1.44
MSL1-201ENST00000339569 RTL9Q8NET4 1388 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 CSB-PGBD3P0DP91 1061 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 AMPHP49418 695 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 GSE1Q14687 1217 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 TSNAXIP1Q2TAA8 658 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 SMC5Q8IY18 1101 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 SPOCK3Q9BQ16 436 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 MBIPQ9NS73 344 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 UBR3Q6ZT12 1888 aa6.06□□□□□ -1.44
MSL1-201ENST00000339569 U2SURPO15042 1029 aaKnown RBP6.05□□□□□ -1.44
MSL1-201ENST00000339569 ALDH1L1O75891 902 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 PHKG2P15735 406 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 CCT4P50991 539 aaKnown RBP6.05□□□□□ -1.44
MSL1-201ENST00000339569 MAP2K5Q13163 448 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 HDGFL1Q5TGJ6 251 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 LRP10Q7Z4F1 713 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 ZBTB40Q9NUA8 1239 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 SPATA31A5Q5VU36 1347 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 SPATA31A7Q8IWB4 1347 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 CREB3O43889 395 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 HSPA1LP34931 641 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 TRIM28Q13263 835 aaKnown RBP6.05□□□□□ -1.44
MSL1-201ENST00000339569 SH3D19Q5HYK7 790 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 MAMSTRQ6ZN01 415 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 UCN2Q96RP3 112 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 TSPYL2Q9H2G4 693 aaPredicted RBP6.05□□□□□ -1.44
MSL1-201ENST00000339569 PRR12Q9ULL5 1215 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 CHRM1P11229 460 aaPredicted RBP6.05□□□□□ -1.44
MSL1-201ENST00000339569 EIF4A1P60842 406 aaKnown RBP6.05□□□□□ -1.44
MSL1-201ENST00000339569 VPS72Q15906 364 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 NBPF6Q5VWK0 638 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.05□□□□□ -1.44
MSL1-201ENST00000339569 IFNL2Q8IZJ0 200 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 GCC1Q96CN9 775 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 NBPF4Q96M43 638 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 ZRANB1Q9UGI0 708 aa6.05□□□□□ -1.44
MSL1-201ENST00000339569 ABCC12Q96J65 1359 aa6.04□□□□□ -1.44
MSL1-201ENST00000339569 KIF4AO95239 1232 aa6.04□□□□□ -1.44
MSL1-201ENST00000339569 CCDC144BQ3MJ40 725 aa6.04□□□□□ -1.44
MSL1-201ENST00000339569 LDLRAD1Q5T700 205 aa6.04□□□□□ -1.44
MSL1-201ENST00000339569 SULT6B1Q6IMI4 303 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms