RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 RBM27Q9P2N5 1060 aaKnown RBP4.28□□□□□ -1.72
HIF1A-201ENST00000323441 ECM29Q5VYK3 1845 aa4.28□□□□□ -1.72
HIF1A-201ENST00000323441 ZPR1O75312 459 aa4.28□□□□□ -1.72
HIF1A-201ENST00000323441 HSP90AB1P08238 724 aaKnown RBP4.28□□□□□ -1.72
HIF1A-201ENST00000323441 RASAL3Q86YV0 1011 aa4.28□□□□□ -1.72
HIF1A-201ENST00000323441 TERF2IPQ9NYB0 399 aa4.28□□□□□ -1.72
HIF1A-201ENST00000323441 KIF7Q2M1P5 1343 aa4.28□□□□□ -1.72
HIF1A-201ENST00000323441 FYB1O15117 783 aa4.27□□□□□ -1.73
HIF1A-201ENST00000323441 FBLN1P23142 703 aa4.27□□□□□ -1.73
HIF1A-201ENST00000323441 CRY2Q49AN0 593 aa4.27□□□□□ -1.73
HIF1A-201ENST00000323441 TBC1D9BQ66K14 1250 aa4.27□□□□□ -1.73
HIF1A-201ENST00000323441 SLC12A5Q9H2X9 1139 aa4.27□□□□□ -1.73
HIF1A-201ENST00000323441 ZNF277Q9NRM2 450 aaPredicted RBP4.27□□□□□ -1.73
HIF1A-201ENST00000323441 H0YGN5 161 aa4.27□□□□□ -1.73
HIF1A-201ENST00000323441 SOX1O00570 391 aaPredicted RBP4.27□□□□□ -1.73
HIF1A-201ENST00000323441 NPR1P16066 1061 aa4.27□□□□□ -1.73
HIF1A-201ENST00000323441 RTFDC1Q9BY42 306 aaPredicted RBP4.27□□□□□ -1.73
HIF1A-201ENST00000323441 IBTKQ9P2D0 1353 aaPredicted RBP4.27□□□□□ -1.73
HIF1A-201ENST00000323441 CDC37L1Q7L3B6 337 aa4.27□□□□□ -1.73
HIF1A-201ENST00000323441 SYNE4Q8N205 404 aa4.27□□□□□ -1.73
HIF1A-201ENST00000323441 EYA1Q99502 592 aa4.27□□□□□ -1.73
HIF1A-201ENST00000323441 GLIS2Q9BZE0 524 aaPredicted RBP4.27□□□□□ -1.73
HIF1A-201ENST00000323441 TRPA1O75762 1119 aa4.26□□□□□ -1.73
HIF1A-201ENST00000323441 RRS1Q15050 365 aaKnown RBP4.26□□□□□ -1.73
HIF1A-201ENST00000323441 OTOFQ9HC10 1997 aa4.26□□□□□ -1.73
HIF1A-201ENST00000323441 GPR25O00155 361 aa4.26□□□□□ -1.73
HIF1A-201ENST00000323441 CC2D2BQ6DHV5 1058 aa4.26□□□□□ -1.73
HIF1A-201ENST00000323441 LMOD1P29536 600 aaPredicted RBP4.25□□□□□ -1.73
HIF1A-201ENST00000323441 ZNF333Q96JL9 665 aa4.25□□□□□ -1.73
HIF1A-201ENST00000323441 RBM42Q9BTD8 480 aaKnown RBP4.25□□□□□ -1.73
HIF1A-201ENST00000323441 ZBTB12Q9Y330 459 aaPredicted RBP4.25□□□□□ -1.73
HIF1A-201ENST00000323441 U3KPZ7 1027 aaPredicted RBP4.25□□□□□ -1.73
HIF1A-201ENST00000323441 ZSWIM8A7E2V4 1837 aa4.25□□□□□ -1.73
HIF1A-201ENST00000323441 NPC1L1Q9UHC9 1359 aa4.25□□□□□ -1.73
HIF1A-201ENST00000323441 A0A087WZG4 1122 aa4.25□□□□□ -1.73
HIF1A-201ENST00000323441 CAMTA2O94983 1202 aa4.25□□□□□ -1.73
HIF1A-201ENST00000323441 HOXA10P31260 410 aaPredicted RBP4.25□□□□□ -1.73
HIF1A-201ENST00000323441 BMP8BP34820 402 aa4.25□□□□□ -1.73
HIF1A-201ENST00000323441 HUNKP57058 714 aa4.25□□□□□ -1.73
HIF1A-201ENST00000323441 FKBP1BP68106 108 aa4.25□□□□□ -1.73
HIF1A-201ENST00000323441 BICDL1Q6ZP65 573 aa4.25□□□□□ -1.73
HIF1A-201ENST00000323441 ZNF622Q969S3 477 aaKnown RBP eCLIP4.25□□□□□ -1.732e-7■□□□□ 8.5
HIF1A-201ENST00000323441 ZBTB1Q9Y2K1 713 aa4.25□□□□□ -1.73
HIF1A-201ENST00000323441 SCN9AQ15858 1988 aa4.25□□□□□ -1.73
HIF1A-201ENST00000323441 PAXIP1Q6ZW49 1069 aaPredicted RBP4.25□□□□□ -1.73
HIF1A-201ENST00000323441 PTPN22Q9Y2R2 807 aa4.25□□□□□ -1.73
HIF1A-201ENST00000323441 EN2P19622 333 aaPredicted RBP4.24□□□□□ -1.73
HIF1A-201ENST00000323441 DNAJC10Q8IXB1 793 aa4.24□□□□□ -1.73
HIF1A-201ENST00000323441 GBA2Q9HCG7 927 aaPredicted RBP4.24□□□□□ -1.73
HIF1A-201ENST00000323441 PRUNE2Q8WUY3 3088 aa4.24□□□□□ -1.73
HIF1A-201ENST00000323441 EIF6P56537 245 aaKnown RBP4.24□□□□□ -1.73
HIF1A-201ENST00000323441 TESK2Q96S53 571 aa4.24□□□□□ -1.73
HIF1A-201ENST00000323441 FOXD4L1Q9NU39 408 aa4.24□□□□□ -1.73
HIF1A-201ENST00000323441 CENPFP49454 3210 aa4.24□□□□□ -1.73
HIF1A-201ENST00000323441 RANBP2P49792 3224 aaKnown RBP4.24□□□□□ -1.73
HIF1A-201ENST00000323441 FKTNO75072 461 aa4.24□□□□□ -1.73
HIF1A-201ENST00000323441 OLFM4Q6UX06 510 aa4.24□□□□□ -1.73
HIF1A-201ENST00000323441 CHRDL2Q6WN34 429 aa4.24□□□□□ -1.73
HIF1A-201ENST00000323441 OTOP1Q7RTM1 612 aa4.24□□□□□ -1.73
HIF1A-201ENST00000323441 TRPM4Q8TD43 1214 aa4.24□□□□□ -1.73
HIF1A-201ENST00000323441 COL9A1P20849 921 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 FAM109BQ6ICB4 259 aaPredicted RBP4.23□□□□□ -1.73
HIF1A-201ENST00000323441 CLEC4GQ6UXB4 293 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 ANKRD13DQ6ZTN6 518 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 SHISA4Q96DD7 197 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 MTMR10Q9NXD2 777 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 ROCK2O75116 1388 aaKnown RBP4.23□□□□□ -1.73
HIF1A-201ENST00000323441 MGAMO43451 1857 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 IL6STP40189 918 aaPredicted RBP4.23□□□□□ -1.73
HIF1A-201ENST00000323441 AMOTQ4VCS5 1084 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.23□□□□□ -1.73
HIF1A-201ENST00000323441 CNBD1Q8NA66 436 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 MUC3AQ02505 3323 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 MAST2Q6P0Q8 1798 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 ZBTB7BO15156 539 aaPredicted RBP4.23□□□□□ -1.73
HIF1A-201ENST00000323441 ALDH1B1P30837 517 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 CABP4P57796 275 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 ST5P78524 1137 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 CAP1Q01518 475 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 GRM1Q13255 1194 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 LRIT3Q3SXY7 679 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 NECTIN2Q92692 538 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 DPF2Q92785 391 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 R3HDMLQ9H3Y0 253 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 LTBP2Q14767 1821 aa4.23□□□□□ -1.73
HIF1A-201ENST00000323441 CAPN2P17655 700 aa4.22□□□□□ -1.73
HIF1A-201ENST00000323441 ZNF157P51786 506 aaPredicted RBP4.22□□□□□ -1.73
HIF1A-201ENST00000323441 CXCL9Q07325 125 aa4.22□□□□□ -1.73
HIF1A-201ENST00000323441 NFATC2IPQ8NCF5 419 aa4.22□□□□□ -1.73
HIF1A-201ENST00000323441 SLC52A2Q9HAB3 445 aa4.22□□□□□ -1.73
HIF1A-201ENST00000323441 TBC1D8O95759 1140 aa4.22□□□□□ -1.73
HIF1A-201ENST00000323441 SLC4A2P04920 1241 aa4.22□□□□□ -1.73
HIF1A-201ENST00000323441 GMPSP49915 693 aaPredicted RBP4.22□□□□□ -1.73
HIF1A-201ENST00000323441 MPNDQ8N594 471 aa4.22□□□□□ -1.73
HIF1A-201ENST00000323441 C2orf69Q8N8R5 385 aa4.22□□□□□ -1.73
HIF1A-201ENST00000323441 JDP2Q8WYK2 163 aa4.22□□□□□ -1.73
HIF1A-201ENST00000323441 EMILIN1Q9Y6C2 1016 aa4.22□□□□□ -1.73
HIF1A-201ENST00000323441 USP48Q86UV5 1035 aa4.22□□□□□ -1.73
HIF1A-201ENST00000323441 ZNRF3Q9ULT6 936 aa4.22□□□□□ -1.73
HIF1A-201ENST00000323441 A0A0C4DFX4 3053 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 225.4 ms