RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 LAMB4A4D0S4 1761 aa24.54■■□□□ 1.52
PAX3-201ENST00000258387 NTSR2O95665 410 aa24.53■■□□□ 1.52
PAX3-201ENST00000258387 HOXA10P31260 410 aaPredicted RBP24.53■■□□□ 1.52
PAX3-201ENST00000258387 C3orf67Q6ZVT6 689 aa24.53■■□□□ 1.52
PAX3-201ENST00000258387 LDHDQ86WU2 507 aa24.53■■□□□ 1.52
PAX3-201ENST00000258387 LAS1LQ9Y4W2 734 aaKnown RBP24.53■■□□□ 1.52
PAX3-201ENST00000258387 PCNTO95613 3336 aa24.53■■□□□ 1.52
PAX3-201ENST00000258387 FZD9O00144 591 aa24.52■■□□□ 1.52
PAX3-201ENST00000258387 AIMP1Q12904 312 aaKnown RBP24.52■■□□□ 1.52
PAX3-201ENST00000258387 CC2D2BQ6DHV5 1058 aa24.52■■□□□ 1.52
PAX3-201ENST00000258387 LRP10Q7Z4F1 713 aa24.52■■□□□ 1.52
PAX3-201ENST00000258387 JDP2Q8WYK2 163 aa24.52■■□□□ 1.52
PAX3-201ENST00000258387 PSMD1Q99460 953 aa24.52■■□□□ 1.52
PAX3-201ENST00000258387 BABAM1Q9NWV8 329 aa24.52■■□□□ 1.52
PAX3-201ENST00000258387 HACL1Q9UJ83 578 aa24.52■■□□□ 1.52
PAX3-201ENST00000258387 ARFGEF2Q9Y6D5 1785 aa24.52■■□□□ 1.52
PAX3-201ENST00000258387 PARP10Q53GL7 1025 aa24.51■■□□□ 1.51
PAX3-201ENST00000258387 COPS6Q7L5N1 327 aa24.51■■□□□ 1.51
PAX3-201ENST00000258387 SLC51AQ86UW1 340 aa24.51■■□□□ 1.51
PAX3-201ENST00000258387 NLRP3Q96P20 1036 aa24.51■■□□□ 1.51
PAX3-201ENST00000258387 UTP14AQ9BVJ6 771 aaKnown RBP24.51■■□□□ 1.51
PAX3-201ENST00000258387 MKRN1Q9UHC7 482 aaKnown RBP24.51■■□□□ 1.51
PAX3-201ENST00000258387 PPEF1O14829 653 aaPredicted RBP24.5■■□□□ 1.51
PAX3-201ENST00000258387 EPHX2P34913 555 aa24.5■■□□□ 1.51
PAX3-201ENST00000258387 CRAMP1Q96RY5 1269 aa24.5■■□□□ 1.51
PAX3-201ENST00000258387 CREBZFQ9NS37 354 aa24.5■■□□□ 1.51
PAX3-201ENST00000258387 MYBBP1AQ9BQG0 1328 aaKnown RBP24.5■■□□□ 1.51
PAX3-201ENST00000258387 IBTKQ9P2D0 1353 aaPredicted RBP24.5■■□□□ 1.51
PAX3-201ENST00000258387 KRT24Q2M2I5 525 aa24.49■■□□□ 1.51
PAX3-201ENST00000258387 GJA3Q9Y6H8 435 aa24.49■■□□□ 1.51
PAX3-201ENST00000258387 RNF123Q5XPI4 1314 aa24.49■■□□□ 1.51
PAX3-201ENST00000258387 HSPA1AP0DMV8 641 aaKnown RBP24.48■■□□□ 1.51
PAX3-201ENST00000258387 HSPA1BP0DMV9 641 aaKnown RBP24.48■■□□□ 1.51
PAX3-201ENST00000258387 NUP98P52948 1817 aa24.48■■□□□ 1.51
PAX3-201ENST00000258387 WDR43Q15061 677 aaKnown RBP eCLIP24.48■■□□□ 1.51
PAX3-201ENST00000258387 XAGE3Q8WTP9 111 aa24.48■■□□□ 1.51
PAX3-201ENST00000258387 EIF6P56537 245 aaKnown RBP24.47■■□□□ 1.51
PAX3-201ENST00000258387 GPC2Q8N158 579 aa24.47■■□□□ 1.51
PAX3-201ENST00000258387 LARGE2Q8N3Y3 721 aa24.47■■□□□ 1.51
PAX3-201ENST00000258387 TMX4Q9H1E5 349 aaPredicted RBP24.47■■□□□ 1.51
PAX3-201ENST00000258387 CHL1O00533 1208 aa24.46■■□□□ 1.51
PAX3-201ENST00000258387 SLC10A5Q5PT55 438 aa24.46■■□□□ 1.51
PAX3-201ENST00000258387 ZNF428Q96B54 188 aa24.46■■□□□ 1.51
PAX3-201ENST00000258387 RUNDC1Q96C34 613 aa24.46■■□□□ 1.51
PAX3-201ENST00000258387 ITGBL1O95965 494 aaPredicted RBP24.45■■□□□ 1.5
PAX3-201ENST00000258387 GRIPAP1Q4V328 841 aa24.45■■□□□ 1.5
PAX3-201ENST00000258387 ADAMTS8Q9UP79 889 aa24.45■■□□□ 1.5
PAX3-201ENST00000258387 TRIM35Q9UPQ4 493 aa24.45■■□□□ 1.5
PAX3-201ENST00000258387 SNED1Q8TER0 1413 aa24.44■■□□□ 1.5
PAX3-201ENST00000258387 PASKQ96RG2 1323 aa24.44■■□□□ 1.5
PAX3-201ENST00000258387 HCLS1P14317 486 aaPredicted RBP24.44■■□□□ 1.5
PAX3-201ENST00000258387 HSP90AB3PQ58FF7 597 aa24.44■■□□□ 1.5
PAX3-201ENST00000258387 PNMA8AQ86V59 439 aaPredicted RBP24.44■■□□□ 1.5
PAX3-201ENST00000258387 RIC1Q4ADV7 1423 aa24.44■■□□□ 1.5
PAX3-201ENST00000258387 TCIRG1Q13488 830 aa24.43■■□□□ 1.5
PAX3-201ENST00000258387 MAP1SQ66K74 1059 aaPredicted RBP24.43■■□□□ 1.5
PAX3-201ENST00000258387 NLRP10Q86W26 655 aa24.43■■□□□ 1.5
PAX3-201ENST00000258387 DDX21Q9NR30 783 aaKnown RBP eCLIP24.43■■□□□ 1.5
PAX3-201ENST00000258387 CNTROBQ8N137 903 aa24.42■■□□□ 1.5
PAX3-201ENST00000258387 CHPF2Q9P2E5 772 aa24.42■■□□□ 1.5
PAX3-201ENST00000258387 TRMT112Q9UI30 125 aaKnown RBP24.42■■□□□ 1.5
PAX3-201ENST00000258387 ATP6V0A2Q9Y487 856 aa24.42■■□□□ 1.5
PAX3-201ENST00000258387 TMEM88BA6NKF7 163 aa24.41■■□□□ 1.5
PAX3-201ENST00000258387 PPIP5K2O43314 1243 aa24.41■■□□□ 1.5
PAX3-201ENST00000258387 NIM1KQ8IY84 436 aa24.41■■□□□ 1.5
PAX3-201ENST00000258387 TNS4Q8IZW8 715 aa24.41■■□□□ 1.5
PAX3-201ENST00000258387 ABCC4O15439 1325 aa24.4■■□□□ 1.5
PAX3-201ENST00000258387 LMOD1P29536 600 aaPredicted RBP24.4■■□□□ 1.5
PAX3-201ENST00000258387 AOC3Q16853 763 aa24.4■■□□□ 1.5
PAX3-201ENST00000258387 CAPN15O75808 1086 aa24.39■■□□□ 1.49
PAX3-201ENST00000258387 BBOX1O75936 387 aa24.39■■□□□ 1.49
PAX3-201ENST00000258387 HDGFL1Q5TGJ6 251 aa24.39■■□□□ 1.49
PAX3-201ENST00000258387 SCN4AP35499 1836 aa24.39■■□□□ 1.49
PAX3-201ENST00000258387 COL4A5P29400 1685 aa24.39■■□□□ 1.49
PAX3-201ENST00000258387 EPS15P42566 896 aa24.38■■□□□ 1.49
PAX3-201ENST00000258387 DDX46Q7L014 1031 aaKnown RBP24.38■■□□□ 1.49
PAX3-201ENST00000258387 SH3TC1Q8TE82 1336 aa24.37■■□□□ 1.49
PAX3-201ENST00000258387 SCNN1DP51172 638 aa24.37■■□□□ 1.49
PAX3-201ENST00000258387 CNTNAP1P78357 1384 aa24.37■■□□□ 1.49
PAX3-201ENST00000258387 VEGFBP49765 207 aa24.36■■□□□ 1.49
PAX3-201ENST00000258387 DPP8Q6V1X1 898 aaPredicted RBP24.36■■□□□ 1.49
PAX3-201ENST00000258387 ANKRD13DQ6ZTN6 518 aa24.36■■□□□ 1.49
PAX3-201ENST00000258387 SP8Q8IXZ3 490 aa24.36■■□□□ 1.49
PAX3-201ENST00000258387 MPNDQ8N594 471 aa24.35■■□□□ 1.49
PAX3-201ENST00000258387 SUPT20HQ8NEM7 779 aa24.35■■□□□ 1.49
PAX3-201ENST00000258387 PLBD2Q8NHP8 589 aa24.35■■□□□ 1.49
PAX3-201ENST00000258387 ATP5J2-PTCD1G3V325 749 aa24.34■■□□□ 1.49
PAX3-201ENST00000258387 DUSP27Q5VZP5 1158 aa24.34■■□□□ 1.49
PAX3-201ENST00000258387 CFAP44Q96MT7 982 aa24.34■■□□□ 1.49
PAX3-201ENST00000258387 VPS33BQ9H267 617 aa24.34■■□□□ 1.49
PAX3-201ENST00000258387 DBF4Q9UBU7 674 aaPredicted RBP24.34■■□□□ 1.49
PAX3-201ENST00000258387 ZNRF3Q9ULT6 936 aa24.34■■□□□ 1.49
PAX3-201ENST00000258387 GRAPQ13588 217 aa24.33■■□□□ 1.49
PAX3-201ENST00000258387 GRAPLQ8TC17 118 aaPredicted RBP24.33■■□□□ 1.49
PAX3-201ENST00000258387 RTFDC1Q9BY42 306 aaPredicted RBP24.33■■□□□ 1.49
PAX3-201ENST00000258387 PRKRIP1Q9H875 184 aaPredicted RBP24.33■■□□□ 1.49
PAX3-201ENST00000258387 CXCL9Q07325 125 aa24.32■■□□□ 1.48
PAX3-201ENST00000258387 RTL5Q5HYW3 569 aaPredicted RBP24.32■■□□□ 1.48
PAX3-201ENST00000258387 FAM89AQ96GI7 184 aa24.32■■□□□ 1.48
PAX3-201ENST00000258387 MBIPQ9NS73 344 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms