RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 SPECC1LQ69YQ0 1117 aa11.75□□□□□ -0.53
TRPM1-201ENST00000256552 KIF1BPQ96EK5 621 aa11.75□□□□□ -0.53
TRPM1-201ENST00000256552 SPINK5Q9NQ38 1064 aaPredicted RBP11.75□□□□□ -0.53
TRPM1-201ENST00000256552 MATR3P43243 847 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRPM1-201ENST00000256552 C6orf163Q5TEZ5 329 aa11.75□□□□□ -0.53
TRPM1-201ENST00000256552 CCDC121Q6ZUS5 278 aa11.75□□□□□ -0.53
TRPM1-201ENST00000256552 CNNM3Q8NE01 707 aa11.75□□□□□ -0.53
TRPM1-201ENST00000256552 MIPOL1Q8TD10 442 aa11.75□□□□□ -0.53
TRPM1-201ENST00000256552 CARD6Q9BX69 1037 aa11.75□□□□□ -0.53
TRPM1-201ENST00000256552 MORC2Q9Y6X9 1032 aaPredicted RBP11.75□□□□□ -0.53
TRPM1-201ENST00000256552 YEATS4O95619 227 aa11.74□□□□□ -0.53
TRPM1-201ENST00000256552 NEDD9Q14511 834 aa11.74□□□□□ -0.53
TRPM1-201ENST00000256552 TANGO6Q9C0B7 1094 aa11.74□□□□□ -0.53
TRPM1-201ENST00000256552 GPT2Q8TD30 523 aa11.74□□□□□ -0.53
TRPM1-201ENST00000256552 AFAP1L1Q8TED9 768 aa11.74□□□□□ -0.53
TRPM1-201ENST00000256552 ZNF215Q9UL58 517 aaPredicted RBP11.74□□□□□ -0.53
TRPM1-201ENST00000256552 ANKRD18BA2A2Z9 1011 aa11.74□□□□□ -0.53
TRPM1-201ENST00000256552 DNA2P51530 1060 aa11.74□□□□□ -0.53
TRPM1-201ENST00000256552 KARSQ15046 597 aaKnown RBP11.74□□□□□ -0.53
TRPM1-201ENST00000256552 FAM76AQ8TAV0 307 aa11.74□□□□□ -0.53
TRPM1-201ENST00000256552 C8orf76Q96K31 380 aa11.74□□□□□ -0.53
TRPM1-201ENST00000256552 CCDC114Q96M63 670 aa11.74□□□□□ -0.53
TRPM1-201ENST00000256552 OPA1O60313 960 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 HDGFL1Q5TGJ6 251 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 JADE2Q9NQC1 790 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 DONSONQ9NYP3 566 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 IFNKQ9P0W0 207 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 C9orf84Q5VXU9 1444 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 CDKL5O76039 1030 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 SULT6B1Q6IMI4 303 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 TRIM22Q8IYM9 498 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 CTAGE9A4FU28 777 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 GCOM1H8Y6P7 765 aaPredicted RBP11.73□□□□□ -0.53
TRPM1-201ENST00000256552 MYZAPP0CAP1 466 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 UTP14AQ9BVJ6 771 aaKnown RBP11.73□□□□□ -0.53
TRPM1-201ENST00000256552 HYPKQ9NX55 129 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 IRX1P78414 480 aaPredicted RBP11.73□□□□□ -0.53
TRPM1-201ENST00000256552 HSP90AA4PQ58FG1 418 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 ZEB2O60315 1214 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 LMOD1P29536 600 aaPredicted RBP11.73□□□□□ -0.53
TRPM1-201ENST00000256552 PIP4K2BP78356 416 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 HLTFQ14527 1009 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRPM1-201ENST00000256552 ZSCAN16Q9H4T2 348 aaPredicted RBP11.73□□□□□ -0.53
TRPM1-201ENST00000256552 PYCARDQ9ULZ3 195 aa11.73□□□□□ -0.53
TRPM1-201ENST00000256552 PIK3R5Q8WYR1 880 aa11.72□□□□□ -0.53
TRPM1-201ENST00000256552 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
TRPM1-201ENST00000256552 TACO1Q9BSH4 297 aaKnown RBP11.72□□□□□ -0.53
TRPM1-201ENST00000256552 CBX8Q9HC52 389 aa11.72□□□□□ -0.53
TRPM1-201ENST00000256552 RAD54L2Q9Y4B4 1467 aa11.72□□□□□ -0.53
TRPM1-201ENST00000256552 SSBP05455 408 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRPM1-201ENST00000256552 ERCC6LQ2NKX8 1250 aa11.72□□□□□ -0.53
TRPM1-201ENST00000256552 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
TRPM1-201ENST00000256552 PDE1AP54750 535 aa11.72□□□□□ -0.53
TRPM1-201ENST00000256552 CCT2P78371 535 aaKnown RBP11.72□□□□□ -0.53
TRPM1-201ENST00000256552 CKAP4Q07065 602 aaKnown RBP11.72□□□□□ -0.53
TRPM1-201ENST00000256552 ZBTB40Q9NUA8 1239 aa11.72□□□□□ -0.53
TRPM1-201ENST00000256552 IRAK4Q9NWZ3 460 aa11.72□□□□□ -0.53
TRPM1-201ENST00000256552 F6X3S4 739 aa11.72□□□□□ -0.53
TRPM1-201ENST00000256552 RNF168Q8IYW5 571 aaPredicted RBP11.72□□□□□ -0.53
TRPM1-201ENST00000256552 CTNNA3Q9UI47 895 aa11.72□□□□□ -0.53
TRPM1-201ENST00000256552 RAD50Q92878 1312 aa11.72□□□□□ -0.53
TRPM1-201ENST00000256552 PPP1R12AO14974 1030 aaPredicted RBP11.71□□□□□ -0.53
TRPM1-201ENST00000256552 NBPF20Q3BBV1 942 aa11.71□□□□□ -0.53
TRPM1-201ENST00000256552 PLEKHM2Q8IWE5 1019 aa11.71□□□□□ -0.53
TRPM1-201ENST00000256552 CALR3Q96L12 384 aaKnown RBP11.71□□□□□ -0.53
TRPM1-201ENST00000256552 LZTFL1Q9NQ48 299 aa11.71□□□□□ -0.53
TRPM1-201ENST00000256552 TOP2BQ02880 1626 aa11.71□□□□□ -0.53
TRPM1-201ENST00000256552 USO1O60763 962 aaKnown RBP11.71□□□□□ -0.53
TRPM1-201ENST00000256552 ACTN2P35609 894 aa11.71□□□□□ -0.53
TRPM1-201ENST00000256552 SPECC1Q5M775 1068 aa11.71□□□□□ -0.53
TRPM1-201ENST00000256552 AQRO60306 1485 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRPM1-201ENST00000256552 NPHP3Q7Z494 1330 aa11.71□□□□□ -0.53
TRPM1-201ENST00000256552 A0A087WUV0 522 aaPredicted RBP11.71□□□□□ -0.53
TRPM1-201ENST00000256552 TUBB4BP68371 445 aa11.71□□□□□ -0.53
TRPM1-201ENST00000256552 DBN1Q16643 649 aa11.71□□□□□ -0.53
TRPM1-201ENST00000256552 CTCFLQ8NI51 663 aaPredicted RBP11.71□□□□□ -0.53
TRPM1-201ENST00000256552 B4GALNT4Q76KP1 1039 aa11.71□□□□□ -0.54
TRPM1-201ENST00000256552 TTC5Q8N0Z6 440 aa11.71□□□□□ -0.54
TRPM1-201ENST00000256552 AK2P54819 239 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 LRMPQ12912 555 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 PPFIA3O75145 1194 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 POLR3DP05423 398 aaPredicted RBP11.7□□□□□ -0.54
TRPM1-201ENST00000256552 SYTL4Q96C24 671 aaPredicted RBP11.7□□□□□ -0.54
TRPM1-201ENST00000256552 ATP8B1O43520 1251 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 CCDC178Q5BJE1 867 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 WWC2Q6AWC2 1192 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 FBXO18Q8NFZ0 1043 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 CCDC97Q96F63 343 aaPredicted RBP11.7□□□□□ -0.54
TRPM1-201ENST00000256552 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRPM1-201ENST00000256552 USP16Q9Y5T5 823 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 ZMYM4Q5VZL5 1548 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 ZNF569Q5MCW4 686 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 DDX46Q7L014 1031 aaKnown RBP11.7□□□□□ -0.54
TRPM1-201ENST00000256552 MRPS27Q92552 414 aaKnown RBP11.7□□□□□ -0.54
TRPM1-201ENST00000256552 SH3GL3Q99963 347 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 NAA15Q9BXJ9 866 aaKnown RBP11.7□□□□□ -0.54
TRPM1-201ENST00000256552 NBPF3Q9H094 633 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 RABEP2Q9H5N1 569 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 GOPCQ9HD26 462 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 PRDM2Q13029 1718 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms