RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 ZNF16P17020 682 aaPredicted RBP5.09□□□□□ -1.59
RBM39-201ENST00000253363 MARSP56192 900 aaKnown RBP5.09□□□□□ -1.59
RBM39-201ENST00000253363 MSS51Q4VC12 460 aa5.09□□□□□ -1.59
RBM39-201ENST00000253363 SEPT3Q9UH03 358 aa5.09□□□□□ -1.59
RBM39-201ENST00000253363 DOLKQ9UPQ8 538 aa5.09□□□□□ -1.59
RBM39-201ENST00000253363 GPSM3Q9Y4H4 160 aa5.09□□□□□ -1.59
RBM39-201ENST00000253363 YTHDC2Q9H6S0 1430 aaKnown RBP5.09□□□□□ -1.59
RBM39-201ENST00000253363 ATP7BP35670 1465 aa5.09□□□□□ -1.6
RBM39-201ENST00000253363 C1orf167Q5SNV9 1468 aa5.09□□□□□ -1.6
RBM39-201ENST00000253363 GOLGA8CPA6NN73 597 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 H3BRB1 525 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 STAU1O95793 577 aaKnown RBP5.08□□□□□ -1.6
RBM39-201ENST00000253363 GTF2IP78347 998 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 SH3RF1Q7Z6J0 888 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 GIPC2Q8TF65 315 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 TUT1Q9H6E5 874 aaKnown RBP5.08□□□□□ -1.6
RBM39-201ENST00000253363 USP35Q9P2H5 1018 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 CFAP65Q6ZU64 1925 aaKnown RBP5.08□□□□□ -1.6
RBM39-201ENST00000253363 ADGRB1O14514 1584 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.08□□□□□ -1.6
RBM39-201ENST00000253363 DISP3Q9P2K9 1392 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 ITGAEP38570 1179 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 RAB15P59190 212 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 IRX6P78412 446 aaPredicted RBP5.08□□□□□ -1.6
RBM39-201ENST00000253363 PSME1Q06323 249 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 SWI5Q1ZZU3 235 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 CCDC102BQ68D86 513 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 TSEN2Q8NCE0 465 aaKnown RBP5.08□□□□□ -1.6
RBM39-201ENST00000253363 FOXJ1Q92949 421 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 BCL2L13Q9BXK5 485 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 TULP4Q9NRJ4 1543 aa5.08□□□□□ -1.6
RBM39-201ENST00000253363 ANKRD33BA6NCL7 494 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 AGERQ15109 404 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 ERFEQ4G0M1 354 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 DZIP3Q86Y13 1208 aaKnown RBP5.07□□□□□ -1.6
RBM39-201ENST00000253363 METP08581 1390 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 NPHP3Q7Z494 1330 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 ABCC6O95255 1503 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 SIX5Q8N196 739 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 BAP1Q92560 729 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 ZNF516Q92618 1163 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 SLC26A8Q96RN1 970 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 IGSF5Q9NSI5 407 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 NOD1Q9Y239 953 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 SBNO1A3KN83 1393 aa5.07□□□□□ -1.6
RBM39-201ENST00000253363 HSPA1LP34931 641 aa5.06□□□□□ -1.6
RBM39-201ENST00000253363 MAP7D1Q3KQU3 841 aa5.06□□□□□ -1.6
RBM39-201ENST00000253363 NPAS4Q8IUM7 802 aa5.06□□□□□ -1.6
RBM39-201ENST00000253363 FAM177A1Q8N128 213 aaPredicted RBP5.06□□□□□ -1.6
RBM39-201ENST00000253363 C14orf93Q9H972 538 aaKnown RBP5.06□□□□□ -1.6
RBM39-201ENST00000253363 BRPF3Q9ULD4 1205 aa5.06□□□□□ -1.6
RBM39-201ENST00000253363 PCDHGA11Q9Y5H2 935 aa5.06□□□□□ -1.6
RBM39-201ENST00000253363 ARHGEF10O15013 1369 aa5.06□□□□□ -1.6
RBM39-201ENST00000253363 CLSPNQ9HAW4 1339 aa5.06□□□□□ -1.6
RBM39-201ENST00000253363 SCTRP47872 440 aa5.06□□□□□ -1.6
RBM39-201ENST00000253363 ZNF772Q68DY9 489 aaPredicted RBP5.06□□□□□ -1.6
RBM39-201ENST00000253363 LARGE2Q8N3Y3 721 aa5.06□□□□□ -1.6
RBM39-201ENST00000253363 ARMC2Q8NEN0 867 aa5.06□□□□□ -1.6
RBM39-201ENST00000253363 PKNOX2Q96KN3 472 aa5.06□□□□□ -1.6
RBM39-201ENST00000253363 CXXC1Q9P0U4 656 aaPredicted RBP5.06□□□□□ -1.6
RBM39-201ENST00000253363 ARHGEF28Q8N1W1 1705 aaKnown RBP5.06□□□□□ -1.6
RBM39-201ENST00000253363 TOPAZ1Q8N9V7 1692 aa5.05□□□□□ -1.6
RBM39-201ENST00000253363 ATP1A2P50993 1020 aa5.05□□□□□ -1.6
RBM39-201ENST00000253363 SEC13P55735 322 aa5.05□□□□□ -1.6
RBM39-201ENST00000253363 GPKOWQ92917 476 aaPredicted RBP eCLIP5.05□□□□□ -1.68e-7■□□□□ 10.9
RBM39-201ENST00000253363 LRRC59Q96AG4 307 aaKnown RBP5.05□□□□□ -1.6
RBM39-201ENST00000253363 HINFPQ9BQA5 517 aa5.05□□□□□ -1.6
RBM39-201ENST00000253363 PXDNQ92626 1479 aa5.05□□□□□ -1.6
RBM39-201ENST00000253363 ROBO2Q9HCK4 1378 aa5.05□□□□□ -1.6
RBM39-201ENST00000253363 SBNO2Q9Y2G9 1366 aa5.05□□□□□ -1.6
RBM39-201ENST00000253363 NWD2Q9ULI1 1742 aa5.05□□□□□ -1.6
RBM39-201ENST00000253363 MARF1Q9Y4F3 1742 aaKnown RBP5.05□□□□□ -1.6
RBM39-201ENST00000253363 ZPR1O75312 459 aa5.05□□□□□ -1.6
RBM39-201ENST00000253363 FKBP5Q13451 457 aaPredicted RBP5.05□□□□□ -1.6
RBM39-201ENST00000253363 ECM1Q16610 540 aa5.05□□□□□ -1.6
RBM39-201ENST00000253363 LCE2DQ5TA82 110 aaPredicted RBP5.05□□□□□ -1.6
RBM39-201ENST00000253363 GTF3C2Q8WUA4 911 aaPredicted RBP5.05□□□□□ -1.6
RBM39-201ENST00000253363 CWC22Q9HCG8 908 aaKnown RBP5.05□□□□□ -1.6
RBM39-201ENST00000253363 DNMT3AQ9Y6K1 912 aaPredicted RBP5.05□□□□□ -1.6
RBM39-201ENST00000253363 PNPLA6Q8IY17 1366 aa5.04□□□□□ -1.6
RBM39-201ENST00000253363 NAA30Q147X3 362 aaPredicted RBP5.04□□□□□ -1.6
RBM39-201ENST00000253363 TRIM50Q86XT4 487 aa5.04□□□□□ -1.6
RBM39-201ENST00000253363 ZNF511Q8NB15 262 aa5.04□□□□□ -1.6
RBM39-201ENST00000253363 NKX2-3Q8TAU0 364 aa5.04□□□□□ -1.6
RBM39-201ENST00000253363 FAM163AQ96GL9 167 aaPredicted RBP5.04□□□□□ -1.6
RBM39-201ENST00000253363 MTRQ99707 1265 aa5.04□□□□□ -1.6
RBM39-201ENST00000253363 BCCIPQ9P287 314 aaKnown RBP eCLIP5.04□□□□□ -1.6
RBM39-201ENST00000253363 FCF1Q9Y324 198 aaKnown RBP5.04□□□□□ -1.6
RBM39-201ENST00000253363 PCDHB11Q9Y5F2 797 aa5.04□□□□□ -1.6
RBM39-201ENST00000253363 TNS3Q68CZ2 1445 aa5.04□□□□□ -1.6
RBM39-201ENST00000253363 SOS2Q07890 1332 aaPredicted RBP5.04□□□□□ -1.6
RBM39-201ENST00000253363 TRPM1Q7Z4N2 1603 aa5.04□□□□□ -1.6
RBM39-201ENST00000253363 PIP4K2BP78356 416 aa5.04□□□□□ -1.6
RBM39-201ENST00000253363 TAS1R3Q7RTX0 852 aa5.04□□□□□ -1.6
RBM39-201ENST00000253363 QRICH2Q9H0J4 1663 aa5.03□□□□□ -1.6
RBM39-201ENST00000253363 NINLQ9Y2I6 1382 aa5.03□□□□□ -1.6
RBM39-201ENST00000253363 S1PR4O95977 384 aa5.03□□□□□ -1.6
RBM39-201ENST00000253363 ADH1BP00325 375 aa5.03□□□□□ -1.6
RBM39-201ENST00000253363 ARHGAP4P98171 946 aa5.03□□□□□ -1.6
RBM39-201ENST00000253363 BRINP3Q76B58 766 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms