RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Sclt1G5E861 688 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Gtpbp10Q8K013 366 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Egfl6Q9JJZ5 550 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Myom3A2ABU4 1439 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Tyro3P55144 880 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Atad3Q925I1 591 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Zbtb22Q9Z0G7 638 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Zfp597E9Q6S0 419 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Anp32cQ64G17 123 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Tspyl2Q7TQI8 677 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Nek5Q7TSC3 627 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Brf1Q8CFK2 676 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Ddx27Q921N6 760 aaKnown RBP10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Ubxn1Q922Y1 297 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Mxra7Q9CZH7 178 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Cdc37l1Q9CZP7 335 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Brd1E9PZ26 1189 aaKnown RBP10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Ppp1r12cQ3UMT1 782 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Mum1Q6DID5 682 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Ccdc57Q6PHN1 1016 aa10.37□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Eps15P42567 897 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Tbc1d9Q3UYK3 1264 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Tmx3Q8BXZ1 456 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Lman1Q9D0F3 517 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Znf287Q9EQB9 759 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 JmyQ9QXM1 983 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Sycp2lA0A0M3U1B0 842 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Btn2a2A4QPC6 514 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Dapk3O54784 448 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Dync1i2O88487 612 aaKnown RBP10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Stmn1P54227 149 aaKnown RBP10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Slc38a10Q5I012 1090 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Liat1Q810M6 228 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Ttc21aQ8C0S4 1314 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Bin1O08539 588 aaKnown RBP10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Diaph2O70566 1098 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 SlmapQ3URD3 845 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Maip1Q8BHE8 291 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Dclk3Q8BWQ5 790 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Apbb1ipQ8R5A3 670 aa10.36□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Gpr161B2RPY5 545 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Nfxl1E9Q8I7 918 aaKnown RBP10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Apaf1O88879 1249 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Puf60Q3UEB3 564 aaKnown RBP10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Sec62Q8BU14 398 aaKnown RBP10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Atf7Q8R0S1 413 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Sept3Q9Z1S5 350 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Ift140E9PY46 1464 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Zmat2Q9CPW7 199 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Oas2E9Q9A9 742 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Tbc1d2bQ3U0J8 965 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 BcanQ61361 883 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 KdrP35918 1367 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Eva1cP58659 440 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Fhdc1Q3ULZ2 1149 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Atp6v0a4Q920R6 833 aa10.35□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Top2aQ01320 1528 aaKnown RBP10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Krt90E9Q1Z0 538 aa10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Dnajc21E9Q8D0 531 aa10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Gm6583E9Q8Z1 469 aa10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Myo1bP46735 1107 aa10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Pabpn1Q8CCS6 302 aaKnown RBP10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Ccdc89Q9DA73 370 aa10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Pde4cQ3UEI1 686 aa10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Luc7l2Q7TNC4 392 aaKnown RBP10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Syce1Q9D495 329 aa10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Zfp91Q62511 572 aa10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Atp2a2O55143 1044 aaKnown RBP10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Caprin2Q05A80 1031 aaKnown RBP10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Mctp2Q5RJH2 878 aa10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Krt15Q61414 452 aa10.34□□□□□ -0.75
Ptpre-204ENSMUST00000209979 Stat1P42225 749 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Cct6bQ61390 531 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Pkd2l2Q9JLG4 621 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Atp8b3Q6UQ17 1335 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Trove2O08848 538 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Zfpm1O35615 995 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Dact3Q0PHV7 610 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Rnf41Q8BH75 317 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Usp11Q99K46 921 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Trpc3Q9QZC1 836 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Zscan29E9Q5B4 869 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Nedd9O35177 833 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 TchpQ3TVW5 497 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 NapgQ9CWZ7 312 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 IqcdQ9D3V1 458 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 4930548H24RikQ9D496 437 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ccdc124Q9D8X2 217 aaKnown RBP10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 RcvrnP34057 202 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Shroom4Q1W617 1475 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 TatQ8QZR1 454 aa10.33□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Gm10378F6XQQ1 160 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Lig3P97386 1015 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Clasp2Q8BRT1 1286 aaKnown RBP10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Golim4Q8BXA1 655 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ccdc70Q9D9B0 223 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Exoc3l2D3YUP5 789 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Drc1Q3USS3 753 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ccdc160Q3UYG1 323 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ift20Q61025 132 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms