RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Ank1Q02357 1862 aa9.17□□□□□ -0.94
Usp40-204ENSMUST00000187758 Zc3h12cQ5DTV4 884 aa9.17□□□□□ -0.94
Usp40-204ENSMUST00000187758 Ets1P27577 440 aa9.17□□□□□ -0.94
Usp40-204ENSMUST00000187758 Cyp19a1P28649 503 aa9.17□□□□□ -0.94
Usp40-204ENSMUST00000187758 Tbc1d9Q3UYK3 1264 aa9.17□□□□□ -0.94
Usp40-204ENSMUST00000187758 Erc2Q6PH08 957 aa9.17□□□□□ -0.94
Usp40-204ENSMUST00000187758 CoblQ5NBX1 1337 aaKnown RBP9.17□□□□□ -0.94
Usp40-204ENSMUST00000187758 Kiaa0232Q80U59 1396 aaKnown RBP9.17□□□□□ -0.94
Usp40-204ENSMUST00000187758 Dctn1O08788 1281 aa9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Hsp90b1P08113 802 aaKnown RBP9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Plcb3P51432 1234 aaKnown RBP9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Pde3bQ61409 1100 aa9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Sipa1l3G3X9J0 1776 aa9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Sult6b1P0CC03 303 aa9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Ppp4r3aQ6P2K6 820 aa9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Edc3Q8K2D3 508 aaKnown RBP9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Sf3a1Q8K4Z5 791 aaKnown RBP9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Slc26a8Q8R0C3 999 aa9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Rrs1Q9CYH6 365 aaKnown RBP9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 CenppQ9CZ92 286 aa9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Gimap8Q75N62 688 aa9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Bag3Q9JLV1 577 aaKnown RBP9.16□□□□□ -0.94
Usp40-204ENSMUST00000187758 Pde4bB1AWC9 736 aa9.15□□□□□ -0.94
Usp40-204ENSMUST00000187758 Zbtb38Q3LR78 1197 aa9.15□□□□□ -0.94
Usp40-204ENSMUST00000187758 Vars2Q3U2A8 1060 aa9.15□□□□□ -0.94
Usp40-204ENSMUST00000187758 Ppm1gQ61074 542 aa9.15□□□□□ -0.94
Usp40-204ENSMUST00000187758 Dhx38Q80X98 1228 aa9.15□□□□□ -0.94
Usp40-204ENSMUST00000187758 Egfem1Q8C088 590 aa9.15□□□□□ -0.94
Usp40-204ENSMUST00000187758 LratQ9JI60 231 aa9.15□□□□□ -0.94
Usp40-204ENSMUST00000187758 Nkx1-2P42580 305 aa9.15□□□□□ -0.94
Usp40-204ENSMUST00000187758 Pim2Q62070 370 aa9.15□□□□□ -0.94
Usp40-204ENSMUST00000187758 Susd4Q8BH32 490 aa9.15□□□□□ -0.94
Usp40-204ENSMUST00000187758 SowahdQ8BY98 327 aa9.15□□□□□ -0.94
Usp40-204ENSMUST00000187758 Tpx2A2APB8 745 aaKnown RBP9.15□□□□□ -0.95
Usp40-204ENSMUST00000187758 Anapc15-psA0A140T8L6 141 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Eya2O08575 532 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Snai1Q02085 264 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Tbc1d32Q3URV1 1296 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Tmc1Q8R4P5 757 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Foxo4Q9WVH3 505 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Cyp2c23E9Q5K4 494 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 GorabQ8BRM2 368 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Stox1B2RQL2 990 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Brpf1B2RRD7 1212 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Dis3l2Q8CI75 870 aaKnown RBP9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Plcd4Q8K3R3 807 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 RestQ8VIG1 1082 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 ArxO35085 564 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Pdia3P27773 505 aaKnown RBP9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Gsdma2Q32M21 443 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Srp68Q8BMA6 625 aaKnown RBP9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Ttc14Q9CSP9 761 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Dpf1Q9QX66 387 aa9.14□□□□□ -0.95
Usp40-204ENSMUST00000187758 Snapc4Q8BP86 1333 aa9.13□□□□□ -0.95
Usp40-204ENSMUST00000187758 CltaO08585 235 aa9.13□□□□□ -0.95
Usp40-204ENSMUST00000187758 Nlrp1aQ2LKU9 1182 aa9.13□□□□□ -0.95
Usp40-204ENSMUST00000187758 MpndQ3TV65 487 aa9.13□□□□□ -0.95
Usp40-204ENSMUST00000187758 Noc3lQ8VI84 807 aaKnown RBP9.13□□□□□ -0.95
Usp40-204ENSMUST00000187758 Ipo9Q91YE6 1041 aa9.13□□□□□ -0.95
Usp40-204ENSMUST00000187758 Stk3Q9JI10 497 aa9.13□□□□□ -0.95
Usp40-204ENSMUST00000187758 Arap2Q8BZ05 1703 aa9.13□□□□□ -0.95
Usp40-204ENSMUST00000187758 Itga6Q61739 1091 aa9.13□□□□□ -0.95
Usp40-204ENSMUST00000187758 Brf1Q8CFK2 676 aa9.13□□□□□ -0.95
Usp40-204ENSMUST00000187758 Tmc2Q8R4P4 888 aa9.13□□□□□ -0.95
Usp40-204ENSMUST00000187758 Ly75Q60767 1723 aa9.13□□□□□ -0.95
Usp40-204ENSMUST00000187758 Lama4P97927 1816 aa9.12□□□□□ -0.95
Usp40-204ENSMUST00000187758 Kdm3aQ6PCM1 1323 aa9.12□□□□□ -0.95
Usp40-204ENSMUST00000187758 Rbm26Q6NZN0 1012 aaKnown RBP9.12□□□□□ -0.95
Usp40-204ENSMUST00000187758 4930504O13RikQ8C5Z9 145 aa9.12□□□□□ -0.95
Usp40-204ENSMUST00000187758 Ciao1Q99KN2 339 aa9.12□□□□□ -0.95
Usp40-204ENSMUST00000187758 Foxo3Q9WVH4 672 aa9.12□□□□□ -0.95
Usp40-204ENSMUST00000187758 CalcaP70160 136 aa9.12□□□□□ -0.95
Usp40-204ENSMUST00000187758 Amhr2Q8K592 568 aa9.12□□□□□ -0.95
Usp40-204ENSMUST00000187758 Ftl2P49945 183 aa9.12□□□□□ -0.95
Usp40-204ENSMUST00000187758 Eva1cP58659 440 aa9.12□□□□□ -0.95
Usp40-204ENSMUST00000187758 Nucb1Q02819 459 aaKnown RBP9.12□□□□□ -0.95
Usp40-204ENSMUST00000187758 Rabep1O35551 862 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Rtkn2Q14B46 604 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 EappQ5BU09 281 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Rhot2Q8JZN7 620 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 AtrnQ9WU60 1428 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Npy5rO70342 466 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 NfkbibQ60778 359 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Atg9aQ68FE2 551 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Ncoa5Q91W39 579 aaKnown RBP9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Taf5lQ91WQ5 589 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Myh1Q5SX40 1942 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Snrpa1P57784 255 aaKnown RBP9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Fam228bQ497Q6 232 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Dnai1Q8C0M8 701 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Ppp6r3Q922D4 844 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Dbndd1Q9CZ00 160 aa9.11□□□□□ -0.95
Usp40-204ENSMUST00000187758 Anxa1P10107 346 aaKnown RBP9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Atp8a2P98200 1148 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Zbtb45Q52KG4 520 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Mctp2Q5RJH2 878 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 DbnlQ62418 436 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Plekho1Q9JIY0 408 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 MeiocA2AG06 965 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 ChgaP26339 463 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms