RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Ddx19aQ61655 478 aaKnown RBP18.51■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Smc1bQ920F6 1248 aa18.51■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Mug2P28666 1451 aa18.51■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Map3k4O08648 1597 aa18.51■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Bin1O08539 588 aaKnown RBP18.51■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Cers3Q1A3B0 383 aa18.51■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Tbc1d9Q3UYK3 1264 aa18.51■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Ccdc66Q6NS45 935 aa18.51■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Fbf1A2A870 1173 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Cep55Q8BT07 462 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Slc39a6Q8C145 765 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Cdk13Q69ZA1 1511 aaKnown RBP18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Ces1hD3Z298 562 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Uspl1Q3ULM6 1089 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Ano8Q6PB70 1060 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Rnf34Q99KR6 376 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 IncenpQ9WU62 880 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Map2k1P31938 393 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Sass6Q80UK7 654 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Cyp2ab1S4R196 498 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Prkab2Q6PAM0 271 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Taok3Q8BYC6 898 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Pik3r4Q8VD65 1358 aa18.5■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 EvcP57680 1005 aa18.49■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Lrrfip1Q3UZ39 729 aaKnown RBP18.49■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Znf287Q9EQB9 759 aa18.49■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Mmel1Q9JLI3 765 aa18.49■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Zkscan7E9PVW1 718 aa18.49■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Trim11Q99PQ2 467 aa18.48■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Izumo3A6PWV3 263 aa18.48■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Card10P58660 1021 aa18.48■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Skint5A7XUY5 1461 aa18.48■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Abcf1Q6P542 837 aaKnown RBP18.48■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Tshz3Q8CGV9 1081 aa18.48■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Dydc2Q9D3X8 139 aa18.48■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Dnajc5P60904 198 aa18.48■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Tmem143Q8VD26 458 aa18.48■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Cct2P80314 535 aaKnown RBP18.48■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Znf653Q6YND2 615 aa18.48■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Ccdc93Q7TQK5 629 aa18.48■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Ccdc191J3QQ27 883 aa18.47■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Lrrc43Q3V0L5 667 aa18.47■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Pde3aQ9Z0X4 1141 aa18.47■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Hs1bp3Q3TC93 395 aa18.47■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Sde2Q8K1J5 448 aaKnown RBP18.47■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Stx6Q9JKK1 255 aa18.47■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Ankrd44B2RXR6 993 aa18.47■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Jarid2Q62315 1234 aa18.47■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Txndc16Q7TN22 820 aa18.47■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Ces1aE9PYP1 563 aa18.47■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 GlmnQ8BZM1 596 aa18.47■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Snw1Q9CSN1 536 aaKnown RBP18.47■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Col17a1Q07563 1470 aa18.46■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Zhx1P70121 873 aa18.46■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Knop1Q9Z2Q2 478 aaKnown RBP18.46■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Ccdc73Q8CDM4 1066 aa18.46■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Cep135Q6P5D4 1140 aa18.46■□□□□ 0.55
Pcdh1-203ENSMUST00000160721 Kdm5cP41230 1554 aa18.45■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Tacc1Q6Y685 774 aa18.45■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Pdcl2Q78Y63 240 aa18.45■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Cc2d1bQ8BRN9 848 aa18.45■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 InhbeO08717 350 aa18.45■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Stx1aO35526 288 aa18.45■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Ccdc172Q810N9 267 aa18.45■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Fam208aQ69ZR9 1610 aaKnown RBP18.45■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Limch1Q3UH68 1057 aa18.45■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Cep120Q7TSG1 988 aa18.45■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Zbtb21E9Q444 1094 aa18.45■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Lrrc59Q922Q8 307 aaKnown RBP18.45■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Bbof1Q3V079 533 aa18.44■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Ppfia3P60469 1194 aa18.44■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 IntuQ059U7 942 aa18.44■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Smim5Q8BT42 78 aa18.44■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Vps18Q8R307 973 aa18.44■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Fam213aQ9CYH2 218 aa18.44■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 SphkapQ6NSW3 1687 aa18.44■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Phlpp2Q8BXA7 1320 aa18.44■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Ccdc150Q8CDI7 1110 aa18.44■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Igbp1bQ9QZ29 343 aa18.44■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Brms1Q99N20 246 aa18.44■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Grm8P47743 908 aa18.43■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Ddx46Q569Z5 1032 aaKnown RBP18.43■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Esco1Q69Z69 843 aa18.43■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Letm1Q9Z2I0 738 aa18.43■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Casp1P29452 402 aa18.43■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Tmx1Q8VBT0 278 aa18.43■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Unc13aQ4KUS2 1712 aa18.43■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 NppbP40753 121 aa18.43■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Sik1Q60670 779 aa18.43■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Erlin1Q91X78 346 aa18.43■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Ercc3P49135 783 aa18.42■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 CebpzP53569 1052 aaKnown RBP18.42■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 LarsQ8BMJ2 1178 aa18.42■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Als2cr12Q8BVM7 383 aa18.42■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Phkg2Q9DB30 406 aa18.42■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Igf2bp2Q5SF07 592 aaKnown RBP18.42■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Snap23O09044 210 aa18.42■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Myo1bP46735 1107 aa18.42■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Ctr9Q62018 1173 aaKnown RBP18.42■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Tmx4Q8C0L0 335 aa18.42■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 117.9 ms