RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Dpf1Q9QX66 387 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Caskin1Q6P9K8 1431 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 1700113H08RikE9Q9Q5 327 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Pde11aP0C1Q2 933 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Panx2Q6IMP4 677 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Cfap100Q80VN0 613 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Zswim4Q8C7B8 1101 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Xpo4Q9ESJ0 1151 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Uggt2E9Q4X2 1504 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Abcc6Q9R1S7 1498 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Trim30cD3YVI9 513 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Bmp2kQ91Z96 1138 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Abcb6Q9DC29 842 aa14.32□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Tsen34Q8BMZ5 316 aa14.31□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Srgap1Q91Z69 1062 aa14.31□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Lrrc6O88978 473 aa14.31□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Anks1aP59672 1150 aa14.31□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Jakmip3Q5DTN8 844 aa14.31□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Plcd1Q8R3B1 756 aa14.31□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Gm10471E9Q1C7 252 aa14.31□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Ccdc121E9Q6D3 323 aa14.31□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 CalrP14211 416 aaKnown RBP14.31□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Cfap69Q8BH53 942 aa14.31□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 TatQ8QZR1 454 aa14.31□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Lig3P97386 1015 aa14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Gtf2f1Q3THK3 508 aaKnown RBP14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Cavin2Q63918 418 aaKnown RBP14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Q8BZJ8 459 aa14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Efcab8Q8C9R9 203 aa14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Luzp1Q8R4U7 1068 aaKnown RBP14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Rad50P70388 1312 aa14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 CoblQ5NBX1 1337 aaKnown RBP14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Atp1a3Q6PIC6 1013 aa14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Kif21aQ9QXL2 1672 aa14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 AI481877A2ALV5 1481 aa14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Kif24Q6NWW5 1356 aa14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Tbc1d2B1AVH7 922 aa14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Eif5P59325 429 aaKnown RBP14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Nol8Q3UHX0 1147 aaKnown RBP14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Ano1Q8BHY3 960 aa14.3□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Dnai2A2AC93 623 aa14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Clec11aO88200 328 aa14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Me3Q8BMF3 604 aa14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Arl8aQ8VEH3 186 aa14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Nphp3Q7TNH6 1325 aa14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Ddx11Q6AXC6 880 aa14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Ncoa7Q6DFV7 943 aa14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Epc1Q8C9X6 813 aa14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Polr3dQ91WD1 398 aa14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Plcb3P51432 1234 aaKnown RBP14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 GscQ02591 256 aa14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Lamb3Q61087 1168 aa14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 MarsQ68FL6 902 aaKnown RBP14.29□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Arhgef11Q68FM7 1552 aa14.28□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Smarcc1P97496 1104 aa14.28□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Zbtb40Q6PCS8 1258 aa14.28□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Ccdc12Q8R344 166 aaKnown RBP14.28□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Gm11983V9GXS8 105 aa14.28□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Dhx8A2A4P0 1244 aaKnown RBP14.28□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 TrhQ62361 256 aa14.28□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Cnbd1B1AWM0 430 aa14.28□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Pkp1P97350 728 aaKnown RBP14.28□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Zfp113Q8C689 439 aa14.28□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Psma5Q9Z2U1 241 aaKnown RBP14.28□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Fkbp4P30416 458 aa14.27□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Ddx54Q8K4L0 874 aaKnown RBP14.27□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Zranb2Q9R020 330 aaKnown RBP14.27□□□□□ -0.12
Pcdh1-202ENSMUST00000159405 Dnajc25A2ALW5 357 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 GmnnO88513 206 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Ms4a2P20490 235 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Zbtb45Q52KG4 520 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Ifit1Q64282 463 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Zranb3Q6NZP1 1069 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Unc5clQ6R653 518 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Rnf187Q8BFX1 236 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Mrpl50Q8VDT9 159 aaKnown RBP14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Synpo2Q91YE8 1087 aaKnown RBP14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Cep89Q9CZX2 791 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Saal1Q9D2C2 474 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Magi2Q9WVQ1 1275 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Atp8b3Q6UQ17 1335 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Kifc2O08672 792 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Mmp8O70138 465 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 GnpatP98192 678 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Fam83gQ5SWY7 812 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Trerf1Q8BXJ2 1205 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Ccdc73Q8CDM4 1066 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Dydc1Q9D9T0 175 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Cbx8Q9QXV1 362 aa14.27□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Prim1P20664 417 aa14.26□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Klra1P20937 262 aa14.26□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Ifit2Q64112 472 aa14.26□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 LarsQ8BMJ2 1178 aa14.26□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Mapkbp1Q6NS57 1503 aa14.26□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Aox4Q3TYQ9 1336 aa14.26□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Sos1Q62245 1319 aa14.26□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Slc7a3P70423 618 aa14.26□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Q8VDP2 222 aa14.26□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Magi3Q9EQJ9 1476 aa14.26□□□□□ -0.13
Pcdh1-202ENSMUST00000159405 Chrm1P12657 460 aa14.26□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms