RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Foxp4Q9DBY0 795 aaKnown RBP13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Rbm8a2A0A0N4SUH6 174 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Cspp1B2RX88 1205 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Ppfia1B2RXQ2 1266 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Ccdc162pQ0VG85 912 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Ubash3aQ3V3E1 624 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Rab3gap1Q80UJ7 981 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Me3Q8BMF3 604 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Rbm8aQ9CWZ3 174 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Igbp1bQ9QZ29 343 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Adgrb1Q3UHD1 1582 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 RictorQ6QI06 1708 aa13.52□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Stk36Q69ZM6 1316 aa13.52□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Parp14Q2EMV9 1817 aa13.52□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Ugt1a5B2RT14 529 aa13.52□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Ets1P27577 440 aa13.52□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Cfap157Q0VFX2 523 aa13.52□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Zcwpw1Q6IR42 630 aa13.52□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Nop14Q8R3N1 860 aaKnown RBP13.52□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 NaspQ99MD9 773 aaKnown RBP13.52□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Ifi35Q9D8C4 286 aa13.52□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Sh3bgrQ9WUZ7 214 aa13.52□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Noc3lQ8VI84 807 aaKnown RBP13.52□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Wdr33Q8K4P0 1330 aaKnown RBP13.51□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Leo1Q5XJE5 667 aa13.51□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Arhgef1Q61210 920 aaKnown RBP13.51□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Irx5Q9JKQ4 484 aa13.51□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Msh6P54276 1358 aaKnown RBP13.51□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Ifit1Q64282 463 aa13.51□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 CtifQ6PEE2 600 aaKnown RBP13.51□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Slc20a2Q80UP8 656 aa13.51□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Ak2Q9WTP6 239 aa13.51□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Dip2aQ8BWT5 1523 aa13.51□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Hoxb7P09024 217 aa13.5□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 MecomP14404 1042 aa13.5□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Fam228bQ497Q6 232 aa13.5□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Pwp2Q8BU03 919 aaKnown RBP13.5□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Zfp113Q8C689 439 aa13.5□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Syt10Q9R0N4 523 aa13.5□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 4930504O13RikQ8C5Z9 145 aa13.5□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 AatfQ9JKX4 526 aaKnown RBP13.5□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Frat1P70339 274 aa13.5□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Sgsm2Q80U12 1005 aa13.5□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Tlcd1Q99JT6 247 aa13.5□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Nphp3Q7TNH6 1325 aa13.49□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Zfp397Q7TNK4 527 aa13.49□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 4930548H24RikQ9D496 437 aa13.49□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Trap1aP19473 224 aa13.49□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Mdm2P23804 489 aa13.49□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Cct4P80315 539 aaKnown RBP13.49□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Ctdnep1Q3TP92 244 aa13.49□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 RbsnQ80Y56 783 aa13.49□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Taf5lQ91WQ5 589 aa13.49□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Eef2kO08796 724 aa13.48□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Psmd1Q3TXS7 953 aa13.48□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Dennd6aQ8BH65 605 aa13.48□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Pcdhb15Q91Y04 786 aa13.48□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Zscan29E9Q5B4 869 aa13.48□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Atf5O70191 283 aa13.48□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 PtpruB1AUH1 1446 aa13.48□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 FancaQ9JL70 1439 aa13.48□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Iffo2Q8R2V2 512 aa13.48□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Nwd1A6H603 1563 aa13.47□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Kif13aQ9EQW7 1749 aa13.47□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Ercc6l2Q9JIM3 1537 aa13.47□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 FanccP50652 591 aa13.47□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Zbtb38Q3LR78 1197 aa13.47□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Taf3Q5HZG4 932 aa13.47□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Adam1bQ8R534 806 aa13.47□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Cep135Q6P5D4 1140 aa13.47□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Sp8Q8BMJ8 486 aa13.47□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Bloc1s2Q9CWG9 143 aa13.47□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 AceP09470 1312 aa13.47□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Pnpla7A2AJ88 1352 aa13.46□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Cdk4P30285 303 aa13.46□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 L1td1Q587J6 782 aaKnown RBP13.46□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Ddx11Q6AXC6 880 aa13.46□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Bend3Q6PAL0 825 aa13.46□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Ift57Q8BXG3 429 aa13.46□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Krt85Q9Z2T6 507 aa13.46□□□□□ -0.25
Prpf40b-208ENSMUST00000136980 Ccdc34Q3UI66 367 aa13.46□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Tsen34Q8BMZ5 316 aa13.46□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Nlgn1Q99K10 843 aa13.46□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 CenpqQ9CPQ5 267 aa13.46□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Fam43bA2AM80 330 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Kcnb2A6H8H5 907 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 1700113H08RikE9Q9Q5 327 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Tpm3P21107 285 aaKnown RBP13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Ube2oQ6ZPJ3 1288 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Amotl2Q8K371 772 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Slc26a8Q8R0C3 999 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Zbtb3Q91X45 518 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 ZwintQ9CQU5 252 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Tshz1Q5DTH5 1084 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Plcd1Q8R3B1 756 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Tmx1Q8VBT0 278 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Hnrnpul1Q8VDM6 859 aaKnown RBP13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Slc7a3P70423 618 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Ano1Q8BHY3 960 aa13.45□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Fyb1O35601 819 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 104.4 ms