RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Igsf1Q7TQA1 1317 aa15.87■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Prl3d3A0A0M6L0J6 224 aa15.87■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Rbm8a2A0A0N4SUH6 174 aa15.87■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Pet2A2AHY8 747 aa15.87■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Rbm8aQ9CWZ3 174 aa15.87■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Ino80Q6ZPV2 1559 aa15.87■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Gm10093D3YYI8 482 aa15.86■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Hdac1O09106 482 aaKnown RBP15.86■□□□□ 0.13
Clcn3-204ENSMUST00000110301 EspnlQ3UYR4 1005 aa15.86■□□□□ 0.13
Clcn3-204ENSMUST00000110301 NaspQ99MD9 773 aaKnown RBP15.86■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Slc14a2Q8R4T9 930 aa15.86■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Speer4dL7N216 212 aa15.85■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Cct2P80314 535 aaKnown RBP15.85■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Lmod1Q8BVA4 595 aa15.85■□□□□ 0.13
Clcn3-204ENSMUST00000110301 4930504O13RikQ8C5Z9 145 aa15.85■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Evc2Q8K1G2 1220 aa15.85■□□□□ 0.13
Clcn3-204ENSMUST00000110301 ParvgQ9ERD8 331 aa15.85■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Fam170aQ66LM6 333 aa15.85■□□□□ 0.13
Clcn3-204ENSMUST00000110301 NsmfQ99NF2 532 aa15.85■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Lmod3E9QA62 571 aa15.85■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Iqsec3Q3TES0 1195 aa15.85■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Ppp6r3Q922D4 844 aa15.85■□□□□ 0.13
Clcn3-204ENSMUST00000110301 CpvlQ9D3S9 478 aa15.85■□□□□ 0.13
Clcn3-204ENSMUST00000110301 NapbP28663 298 aa15.84■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Krt82Q99M74 516 aa15.84■□□□□ 0.13
Clcn3-204ENSMUST00000110301 AU015836B2RUM3 263 aa15.84■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Gtf2f1Q3THK3 508 aaKnown RBP15.84■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Zbtb21E9Q444 1094 aa15.84■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Ppp1r21Q3TDD9 780 aa15.84■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Tmem266Q8BZB3 538 aa15.84■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Srek1Q8BZX4 494 aaKnown RBP15.84■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Tmem119Q8R138 280 aa15.84■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Gm7347D3YYI9 267 aa15.84■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Speer4aF8VPX6 267 aa15.84■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Sult6b1P0CC03 303 aa15.84■□□□□ 0.13
Clcn3-204ENSMUST00000110301 Casp1P29452 402 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 HellsQ60848 821 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Pram1Q6BCL1 675 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Zbtb40Q6PCS8 1258 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Ankrd23Q812A3 306 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Sgsm1Q8BPQ7 1093 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Zkscan8Q8BSL0 588 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Lmbrd2Q8C561 694 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 ImmtQ8CAQ8 757 aaKnown RBP15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Krt84Q99M73 603 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Gigyf1Q99MR1 1044 aaKnown RBP15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Ppp4r3aQ6P2K6 820 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Mlh1Q9JK91 760 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Nid2O88322 1403 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Wdr78E9PYY5 807 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Eya2O08575 532 aa15.83■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Nrxn1Q9CS84 1514 aa15.82■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Wdhd1P59328 1117 aa15.82■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Kdm4aQ8BW72 1064 aa15.82■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Atf7Q8R0S1 413 aa15.82■□□□□ 0.12
Clcn3-204ENSMUST00000110301 LlphQ9D945 130 aaKnown RBP15.82■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Slc7a3P70423 618 aa15.82■□□□□ 0.12
Clcn3-204ENSMUST00000110301 IntuQ059U7 942 aa15.82■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Cep57l1Q8VDS7 400 aa15.82■□□□□ 0.12
Clcn3-204ENSMUST00000110301 UvssaQ9D479 717 aa15.82■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Ube2q2Q8K2Z8 378 aa15.82■□□□□ 0.12
Clcn3-204ENSMUST00000110301 RtcbQ99LF4 505 aaKnown RBP15.82■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Gm973E9Q295 1059 aa15.81■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Rbm26Q6NZN0 1012 aaKnown RBP15.81■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Itga6Q61739 1091 aa15.81■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Rec8Q8C5S7 591 aa15.81■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Zbtb1Q91VL9 713 aa15.81■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Rbm17Q8JZX4 405 aaKnown RBP15.8■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Cep55Q8BT07 462 aa15.8■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Uhrf1bp1B2KF50 1429 aa15.8■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Zkscan16A2ALW2 728 aa15.8■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Tubb6Q922F4 447 aa15.8■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Znf692Q3U381 531 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Lrrc43Q3V0L5 667 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Ccdc158Q8CDI6 1109 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Rasa1E9PYG6 1038 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Fam160b2Q80YR2 744 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Zbtb22Q9Z0G7 638 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Abcc12Q80WJ6 1366 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Cdk5rap2Q8K389 1822 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 CltaO08585 235 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Mctp2Q5RJH2 878 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Ifit2Q64112 472 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Dbndd1Q9CZ00 160 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Rai14Q9EP71 979 aaKnown RBP15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Simc1E9Q6E9 1354 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Gpatch3Q8BIY1 525 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Rufy2Q8R4C2 606 aa15.79■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Nup133Q8R0G9 1155 aa15.78■□□□□ 0.12
Clcn3-204ENSMUST00000110301 RarsQ9D0I9 660 aaKnown RBP15.78■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Ak2Q9WTP6 239 aa15.78■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Abcc10Q8R4P9 1501 aa15.78■□□□□ 0.12
Clcn3-204ENSMUST00000110301 InhbeO08717 350 aa15.78■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Pla2g4fQ50L41 855 aa15.78■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Msl1Q6PDM1 616 aa15.78■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Hook1Q8BIL5 728 aa15.78■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Stk38Q91VJ4 465 aa15.78■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Atp7bQ64446 1462 aa15.78■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Znf521Q6KAS7 1311 aa15.78■□□□□ 0.12
Clcn3-204ENSMUST00000110301 Dis3l2Q8CI75 870 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms