RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Add3Q9QYB5 706 aaKnown RBP15.37■□□□□ 0.05
Nup88-203ENSMUST00000108531 Wdr33Q8K4P0 1330 aaKnown RBP15.37■□□□□ 0.05
Nup88-203ENSMUST00000108531 Bcl9Q9D219 1425 aa15.37■□□□□ 0.05
Nup88-203ENSMUST00000108531 Wdr17E9Q271 1322 aa15.37■□□□□ 0.05
Nup88-203ENSMUST00000108531 MecomP14404 1042 aa15.37■□□□□ 0.05
Nup88-203ENSMUST00000108531 Sp8Q8BMJ8 486 aa15.37■□□□□ 0.05
Nup88-203ENSMUST00000108531 GphnQ8BUV3 769 aaKnown RBP15.37■□□□□ 0.05
Nup88-203ENSMUST00000108531 Ddx60E9PZQ1 1711 aa15.36■□□□□ 0.05
Nup88-203ENSMUST00000108531 Simc1E9Q6E9 1354 aa15.36■□□□□ 0.05
Nup88-203ENSMUST00000108531 Snx13Q6PHS6 957 aa15.36■□□□□ 0.05
Nup88-203ENSMUST00000108531 Cep57l1Q8VDS7 400 aa15.36■□□□□ 0.05
Nup88-203ENSMUST00000108531 Lmbr1lQ9D1E5 489 aa15.36■□□□□ 0.05
Nup88-203ENSMUST00000108531 Tns3Q5SSZ5 1440 aa15.36■□□□□ 0.05
Nup88-203ENSMUST00000108531 TnrQ8BYI9 1358 aa15.36■□□□□ 0.05
Nup88-203ENSMUST00000108531 Cspp1B2RX88 1205 aa15.36■□□□□ 0.05
Nup88-203ENSMUST00000108531 Mdm2P23804 489 aa15.36■□□□□ 0.05
Nup88-203ENSMUST00000108531 FanccP50652 591 aa15.36■□□□□ 0.05
Nup88-203ENSMUST00000108531 Rps6kb1Q8BSK8 525 aa15.36■□□□□ 0.05
Nup88-203ENSMUST00000108531 Inpp5bQ8K337 993 aa15.36■□□□□ 0.05
Nup88-203ENSMUST00000108531 Zkscan7E9PVW1 718 aa15.35■□□□□ 0.05
Nup88-203ENSMUST00000108531 Ptgs1P22437 602 aa15.35■□□□□ 0.05
Nup88-203ENSMUST00000108531 Cnnm3Q32NY4 713 aa15.35■□□□□ 0.05
Nup88-203ENSMUST00000108531 Ccdc155Q80VJ8 648 aa15.35■□□□□ 0.05
Nup88-203ENSMUST00000108531 Tceanc2Q8R2M0 207 aa15.35■□□□□ 0.05
Nup88-203ENSMUST00000108531 Shank2Q80Z38 1476 aa15.35■□□□□ 0.05
Nup88-203ENSMUST00000108531 Nom1Q3UFM5 854 aaKnown RBP15.35■□□□□ 0.05
Nup88-203ENSMUST00000108531 Oxsr1Q6P9R2 527 aa15.35■□□□□ 0.05
Nup88-203ENSMUST00000108531 Grpel1Q99LP6 217 aa15.35■□□□□ 0.05
Nup88-203ENSMUST00000108531 Hmg20bQ9Z104 317 aa15.35■□□□□ 0.05
Nup88-203ENSMUST00000108531 Cavin1O54724 392 aa15.34■□□□□ 0.05
Nup88-203ENSMUST00000108531 Cfap157Q0VFX2 523 aa15.34■□□□□ 0.05
Nup88-203ENSMUST00000108531 Ppm1mQ8BU27 406 aa15.34■□□□□ 0.05
Nup88-203ENSMUST00000108531 Ttc27Q8CD92 847 aa15.34■□□□□ 0.05
Nup88-203ENSMUST00000108531 Ndufa8Q9DCJ5 172 aa15.34■□□□□ 0.05
Nup88-203ENSMUST00000108531 Gm10471E9Q1C7 252 aa15.34■□□□□ 0.05
Nup88-203ENSMUST00000108531 Tpm3P21107 285 aaKnown RBP15.34■□□□□ 0.05
Nup88-203ENSMUST00000108531 Tbc1d4Q8BYJ6 1307 aa15.33■□□□□ 0.05
Nup88-203ENSMUST00000108531 CgnP59242 1191 aa15.33■□□□□ 0.04
Nup88-203ENSMUST00000108531 RubcnlQ3TD16 648 aa15.33■□□□□ 0.04
Nup88-203ENSMUST00000108531 Nlrp9bQ66X22 1003 aa15.33■□□□□ 0.04
Nup88-203ENSMUST00000108531 Larp1Q6ZQ58 1072 aaKnown RBP15.33■□□□□ 0.04
Nup88-203ENSMUST00000108531 4930504O13RikQ8C5Z9 145 aa15.33■□□□□ 0.04
Nup88-203ENSMUST00000108531 Pdia6Q922R8 440 aaKnown RBP15.33■□□□□ 0.04
Nup88-203ENSMUST00000108531 AceP09470 1312 aa15.33■□□□□ 0.04
Nup88-203ENSMUST00000108531 Pdzd9Q9D9M4 266 aa15.33■□□□□ 0.04
Nup88-203ENSMUST00000108531 PhaxQ9JJT9 385 aaKnown RBP15.33■□□□□ 0.04
Nup88-203ENSMUST00000108531 Col22a1E9Q7P1 1613 aa15.32■□□□□ 0.04
Nup88-203ENSMUST00000108531 Gm45140A0A0N4SUM8 220 aa15.32■□□□□ 0.04
Nup88-203ENSMUST00000108531 Brpf3B2KF05 1204 aaKnown RBP15.32■□□□□ 0.04
Nup88-203ENSMUST00000108531 Tyro3P55144 880 aa15.32■□□□□ 0.04
Nup88-203ENSMUST00000108531 Nucb2P81117 420 aa15.32■□□□□ 0.04
Nup88-203ENSMUST00000108531 Kcnf1Q7TSH7 493 aa15.32■□□□□ 0.04
Nup88-203ENSMUST00000108531 Plcd1Q8R3B1 756 aa15.32■□□□□ 0.04
Nup88-203ENSMUST00000108531 Tubb6Q922F4 447 aa15.32■□□□□ 0.04
Nup88-203ENSMUST00000108531 Mst1rQ62190 1378 aa15.32■□□□□ 0.04
Nup88-203ENSMUST00000108531 Bach1P97302 739 aa15.32■□□□□ 0.04
Nup88-203ENSMUST00000108531 MsnP26041 577 aaKnown RBP15.31■□□□□ 0.04
Nup88-203ENSMUST00000108531 Me3Q8BMF3 604 aa15.31■□□□□ 0.04
Nup88-203ENSMUST00000108531 Plcd3Q8K2J0 785 aa15.31■□□□□ 0.04
Nup88-203ENSMUST00000108531 StrbpQ91WM1 672 aaKnown RBP15.31■□□□□ 0.04
Nup88-203ENSMUST00000108531 Krt85Q9Z2T6 507 aa15.31■□□□□ 0.04
Nup88-203ENSMUST00000108531 Col15a1O35206 1367 aa15.31■□□□□ 0.04
Nup88-203ENSMUST00000108531 InsrrQ9WTL4 1300 aa15.31■□□□□ 0.04
Nup88-203ENSMUST00000108531 Thsd7aQ69ZU6 1645 aa15.31■□□□□ 0.04
Nup88-203ENSMUST00000108531 Tjp1P39447 1745 aaKnown RBP15.31■□□□□ 0.04
Nup88-203ENSMUST00000108531 Igfbp6P47880 238 aa15.31■□□□□ 0.04
Nup88-203ENSMUST00000108531 Morc2aQ69ZX6 1030 aa15.31■□□□□ 0.04
Nup88-203ENSMUST00000108531 TnmdQ9EP64 317 aa15.31■□□□□ 0.04
Nup88-203ENSMUST00000108531 Unc13bQ9Z1N9 1602 aa15.3■□□□□ 0.04
Nup88-203ENSMUST00000108531 Lekr1B2RVN1 116 aa15.3■□□□□ 0.04
Nup88-203ENSMUST00000108531 Iqsec3Q3TES0 1195 aa15.3■□□□□ 0.04
Nup88-203ENSMUST00000108531 Rab3gap1Q80UJ7 981 aa15.3■□□□□ 0.04
Nup88-203ENSMUST00000108531 Nop14Q8R3N1 860 aaKnown RBP15.3■□□□□ 0.04
Nup88-203ENSMUST00000108531 Bmp2kQ91Z96 1138 aa15.3■□□□□ 0.04
Nup88-203ENSMUST00000108531 ZwintQ9CQU5 252 aa15.3■□□□□ 0.04
Nup88-203ENSMUST00000108531 Tbc1d8Q9Z1A9 1134 aa15.3■□□□□ 0.04
Nup88-203ENSMUST00000108531 Gm973E9Q295 1059 aa15.29■□□□□ 0.04
Nup88-203ENSMUST00000108531 R3hcc1Q8BSI6 488 aa15.29■□□□□ 0.04
Nup88-203ENSMUST00000108531 Chmp7Q8R1T1 451 aa15.29■□□□□ 0.04
Nup88-203ENSMUST00000108531 Srgap1Q91Z69 1062 aa15.29■□□□□ 0.04
Nup88-203ENSMUST00000108531 Stat1P42225 749 aa15.29■□□□□ 0.04
Nup88-203ENSMUST00000108531 Lins1Q3U1D0 764 aa15.29■□□□□ 0.04
Nup88-203ENSMUST00000108531 DbnlQ62418 436 aa15.29■□□□□ 0.04
Nup88-203ENSMUST00000108531 Ppp1r10Q80W00 888 aaKnown RBP15.29■□□□□ 0.04
Nup88-203ENSMUST00000108531 Tmem87bQ8BKU8 555 aa15.29■□□□□ 0.04
Nup88-203ENSMUST00000108531 Nek11Q8C0Q4 628 aa15.29■□□□□ 0.04
Nup88-203ENSMUST00000108531 Ric1Q69ZJ7 1422 aa15.29■□□□□ 0.04
Nup88-203ENSMUST00000108531 Rbbp8nlA2ABX0 614 aa15.28■□□□□ 0.04
Nup88-203ENSMUST00000108531 Ctdnep1Q3TP92 244 aa15.28■□□□□ 0.04
Nup88-203ENSMUST00000108531 TkfcQ8VC30 578 aa15.28■□□□□ 0.04
Nup88-203ENSMUST00000108531 Hmgn5Q9JL35 406 aa15.28■□□□□ 0.04
Nup88-203ENSMUST00000108531 TefQ9JLC6 301 aa15.28■□□□□ 0.04
Nup88-203ENSMUST00000108531 GpkowQ56A08 488 aa15.28■□□□□ 0.04
Nup88-203ENSMUST00000108531 Adora1Q60612 326 aa15.28■□□□□ 0.04
Nup88-203ENSMUST00000108531 Dzip1Q8BMD2 852 aa15.28■□□□□ 0.04
Nup88-203ENSMUST00000108531 Mctp1E9PV86 951 aa15.27■□□□□ 0.04
Nup88-203ENSMUST00000108531 Hmx1O70218 332 aa15.27■□□□□ 0.04
Nup88-203ENSMUST00000108531 Nfe2l3Q9WTM4 660 aa15.27■□□□□ 0.04
Nup88-203ENSMUST00000108531 Slit1Q80TR4 1531 aa15.27■□□□□ 0.04
Nup88-203ENSMUST00000108531 Fbxl16A2RT62 479 aa15.27■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms