RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Q8C5K5 320 aa23.69■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Amhr2Q8K592 568 aa23.69■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 CenpbP27790 599 aa23.68■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Ubn2Q80WC1 1314 aa23.68■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Trim30dE9PWL0 497 aa23.68■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Rbm27Q5SFM8 1060 aaKnown RBP23.68■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Jarid2Q62315 1234 aa23.68■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Cyp7a1Q64505 503 aa23.68■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Gimap8Q75N62 688 aa23.68■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Mybbp1aQ7TPV4 1344 aaKnown RBP23.67■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Spata31d1bE9QA57 1361 aa23.67■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 MeiocA2AG06 965 aa23.67■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 BcanQ61361 883 aa23.67■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Stox1B2RQL2 990 aa23.66■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Duox1A2AQ92 1551 aa23.66■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Ccdc183A2AJB1 534 aa23.65■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Trim34bJ3QNR8 485 aa23.65■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Sult6b1P0CC03 303 aa23.65■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Ets1P27577 440 aa23.65■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Ppp4r3aQ6P2K6 820 aa23.65■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Ttc14Q9CSP9 761 aa23.65■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Bcar3Q9QZK2 820 aa23.65■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 CltaO08585 235 aa23.64■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 AppP12023 770 aa23.64■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 NppbP40753 121 aa23.64■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Fam198bQ3UPI1 517 aa23.64■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Col11a2Q64739 1736 aa23.64■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Ccdc6D3YZP9 469 aa23.63■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Apba2P98084 750 aa23.63■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Ptpdc1Q6NZK8 747 aa23.63■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Pde4bB1AWC9 736 aa23.63■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Dhx38Q80X98 1228 aa23.63■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Edc3Q8K2D3 508 aaKnown RBP23.63■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Zkscan2G3X952 960 aa23.62■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Eya2O08575 532 aa23.62■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Nlrp1aQ2LKU9 1182 aa23.62■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Atg9aQ68FE2 551 aa23.62■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Rbm26Q6NZN0 1012 aaKnown RBP23.62■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Ciao1Q99KN2 339 aa23.62■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Tktl2Q9D4D4 627 aa23.62■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Dis3l2Q8CI75 870 aaKnown RBP23.61■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Chmp3Q9CQ10 224 aa23.61■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 4931408C20RikE9PWP9 1381 aa23.61■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Tmc2Q8R4P4 888 aa23.6■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 LratQ9JI60 231 aa23.6■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Foxo3Q9WVH4 672 aa23.6■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Sumf1Q8R0F3 372 aa23.6■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Itga6Q61739 1091 aa23.59■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Sf3a1Q8K4Z5 791 aaKnown RBP23.59■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Lrp5Q91VN0 1614 aa23.59■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 CenppQ9CZ92 286 aa23.58■■□□□ 1.37
Ttc39a-203ENSMUST00000106619 Tpx2A2APB8 745 aaKnown RBP23.57■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Tlr8P58682 1032 aa23.57■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Ak7Q9D2H2 614 aa23.57■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Rgs17Q9QZB0 210 aa23.57■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Bag3Q9JLV1 577 aaKnown RBP23.57■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 NfkbibQ60778 359 aa23.56■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Plcd4Q8K3R3 807 aa23.56■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Rtn4Q99P72 1162 aaKnown RBP23.56■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Rrs1Q9CYH6 365 aaKnown RBP23.56■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Akt1s1Q9D1F4 257 aa23.56■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Hmox1P14901 289 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Ftl2P49945 183 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Jdp2P97875 163 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Slc38a10Q5I012 1090 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Arid3aQ62431 601 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Slc26a8Q8R0C3 999 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Dbndd1Q9CZ00 160 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Tbc1d4Q8BYJ6 1307 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Gpr182P43142 395 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Fam228bQ497Q6 232 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Ipo8Q7TMY7 1010 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Fam102bQ8BQS4 339 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Nek4Q9Z1J2 792 aa23.55■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Kdm3aQ6PCM1 1323 aa23.54■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Neurod6P48986 337 aa23.54■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Atp8a2P98200 1148 aa23.54■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 4930504O13RikQ8C5Z9 145 aa23.54■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Ncoa5Q91W39 579 aaKnown RBP23.54■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Brpf1B2RRD7 1212 aa23.53■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Nkx1-2P42580 305 aa23.53■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Snrpa1P57784 255 aaKnown RBP23.53■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Tbc1d9Q3UYK3 1264 aa23.53■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Noc3lQ8VI84 807 aaKnown RBP23.53■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Taf5lQ91WQ5 589 aa23.53■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Eif2s2Q99L45 331 aaKnown RBP23.53■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Erc2Q6PH08 957 aa23.52■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Sf3b3Q921M3 1217 aaKnown RBP23.52■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 DbnlQ62418 436 aa23.52■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 RestQ8VIG1 1082 aa23.52■■□□□ 1.36
Ttc39a-203ENSMUST00000106619 Anapc15-psA0A140T8L6 141 aa23.51■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Gsdma2Q32M21 443 aa23.51■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 CpzQ8R4V4 654 aa23.5■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Tmc1Q8R4P5 757 aa23.5■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Anxa1P10107 346 aaKnown RBP23.49■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Mctp2Q5RJH2 878 aa23.49■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Q9D2X8 372 aa23.49■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Fbxo3Q9DC63 480 aa23.49■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Plekho1Q9JIY0 408 aa23.49■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Bin2D3Z6Q9 489 aa23.48■■□□□ 1.35
Retrieved 100 of 22,080 RNA–protein pairs in 57.1 ms