RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Wdhd1P59328 1117 aa12.23□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Itga6Q61739 1091 aa12.23□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Atg4aQ8C9S8 396 aa12.23□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Foxo4Q9WVH3 505 aa12.23□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Cyp46a1Q9WVK8 500 aa12.23□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Adamtsl1Q8BLI0 1745 aa12.23□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Ncoa5Q91W39 579 aaKnown RBP12.23□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Kif18aQ91WD7 886 aa12.23□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Ly75Q60767 1723 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Wwc1Q5SXA9 1104 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Rab3gap1Q80UJ7 981 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Tmem87bQ8BKU8 555 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 CpvlQ9D3S9 478 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Bcar3Q9QZK2 820 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Sytl4Q9R0Q1 673 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 IncenpQ9WU62 880 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Fkbp1aP26883 108 aaKnown RBP12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Cog6Q8R3I3 657 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Kif2cQ922S8 721 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Prl3d3A0A0M6L0J6 224 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Map7O88735 730 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 4930504O13RikQ8C5Z9 145 aa12.22□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Slc26a8Q8R0C3 999 aa12.21□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Gm7347D3YYI9 267 aa12.21□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Speer4aF8VPX6 267 aa12.21□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Hmox1P14901 289 aa12.21□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Dpf1Q9QX66 387 aa12.21□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Prl3d2F6R3P9 224 aa12.21□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Sult6b1P0CC03 303 aa12.21□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Cgnl1Q6AW69 1298 aa12.21□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Timm10P62073 90 aa12.2□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Dis3l2Q8CI75 870 aaKnown RBP12.2□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Brpf1B2RRD7 1212 aa12.2□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Cct4P80315 539 aaKnown RBP12.2□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Gja10Q9WUS4 505 aa12.2□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 LifrP42703 1092 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 CalcaP70160 136 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Hs1bp3Q3TC93 395 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Cetn4Q8K4K1 168 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 KnstrnQ9D9Z1 312 aaKnown RBP12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Abca3Q8R420 1704 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Ubn2Q80WC1 1314 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Brd1E9PZ26 1189 aaKnown RBP12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Zfyve9A2A8R0 1397 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Npy5rO70342 466 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Gpr182P43142 395 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Plcb3P51432 1234 aaKnown RBP12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 St5Q924W7 1134 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Gcc1Q9D4H2 778 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Stk3Q9JI10 497 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Ric1Q69ZJ7 1422 aa12.19□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 ArxO35085 564 aa12.18□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Ppp2r3aB2RXC8 1150 aa12.18□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Eya2O08575 532 aa12.18□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Nol8Q3UHX0 1147 aaKnown RBP12.18□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Ddx60E9PZQ1 1711 aa12.18□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Ftl2P49945 183 aa12.18□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Ptpdc1Q6NZK8 747 aa12.18□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 ScaperF8VQ70 1398 aaKnown RBP12.18□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Zkscan8Q8BSL0 588 aa12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Q8C6G1 249 aa12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Sde2Q8K1J5 448 aaKnown RBP12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Col23a1Q8K4G2 532 aa12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Tmem143Q8VD26 458 aa12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Bin2D3Z6Q9 489 aa12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Snrpa1P57784 255 aaKnown RBP12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 IntuQ059U7 942 aa12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Dok7Q18PE0 504 aa12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Fam84aQ9D650 292 aa12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Sh3bp5Q9Z131 463 aa12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Rtkn2Q14B46 604 aa12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Ttc14Q9CSP9 761 aa12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Bag3Q9JLV1 577 aaKnown RBP12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Kndc1Q0KK55 1742 aa12.17□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Ell2Q3UKU1 639 aa12.16□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 PsdQ5DTT2 1024 aa12.16□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Aldh8a1Q8BH00 487 aa12.16□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Rbm33Q9CXK9 1231 aaKnown RBP12.16□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Q9D2X8 372 aa12.16□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Nek4Q9Z1J2 792 aa12.16□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Hsp90b1P08113 802 aaKnown RBP12.16□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Plekho1Q9JIY0 408 aa12.16□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Ank1Q02357 1862 aa12.15□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Abcc4E9Q236 1325 aa12.15□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Golgb1E9PVZ8 3238 aa12.15□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Emilin1Q99K41 1017 aa12.15□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Sh3tc1G3X9F6 1346 aa12.15□□□□□ -0.46
Ccdc38-201ENSMUST00000092215 Tpx2A2APB8 745 aaKnown RBP12.15□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Wdr63B2RY71 923 aa12.15□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 1700029H14RikE9PY36 240 aa12.15□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Casp1P29452 402 aa12.15□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Gsdma2Q32M21 443 aa12.15□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Ltv1Q6NSQ7 470 aaKnown RBP12.15□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Naa16Q9DBB4 864 aa12.15□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Prdm11A2AGX3 565 aa12.14□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Il1rapl2Q9ERS6 686 aa12.14□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Mfap1aC0HKD8 439 aaKnown RBP12.14□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Mfap1bC0HKD9 439 aaKnown RBP12.14□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Atg9aQ68FE2 551 aa12.14□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Tbc1d8Q9Z1A9 1134 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms