RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 ScaperF8VQ70 1398 aaKnown RBP18.8■□□□□ 0.6
Trim3-201ENSMUST00000057525 Ptpdc1Q6NZK8 747 aa18.8■□□□□ 0.6
Trim3-201ENSMUST00000057525 Akt1s1Q9D1F4 257 aa18.8■□□□□ 0.6
Trim3-201ENSMUST00000057525 Tpx2A2APB8 745 aaKnown RBP18.79■□□□□ 0.6
Trim3-201ENSMUST00000057525 Zc3h12cQ5DTV4 884 aa18.79■□□□□ 0.6
Trim3-201ENSMUST00000057525 Egfem1Q8C088 590 aa18.79■□□□□ 0.6
Trim3-201ENSMUST00000057525 Dis3l2Q8CI75 870 aaKnown RBP18.79■□□□□ 0.6
Trim3-201ENSMUST00000057525 Msl1Q6PDM1 616 aa18.79■□□□□ 0.6
Trim3-201ENSMUST00000057525 Abcc4E9Q236 1325 aa18.79■□□□□ 0.6
Trim3-201ENSMUST00000057525 Ncoa5Q91W39 579 aaKnown RBP18.79■□□□□ 0.6
Trim3-201ENSMUST00000057525 Kiaa0232Q80U59 1396 aaKnown RBP18.78■□□□□ 0.6
Trim3-201ENSMUST00000057525 Prune1Q8BIW1 454 aa18.78■□□□□ 0.6
Trim3-201ENSMUST00000057525 Sumf1Q8R0F3 372 aa18.78■□□□□ 0.6
Trim3-201ENSMUST00000057525 Chrna2Q91X60 512 aa18.78■□□□□ 0.6
Trim3-201ENSMUST00000057525 Fam84aQ9D650 292 aa18.78■□□□□ 0.6
Trim3-201ENSMUST00000057525 Foxo4Q9WVH3 505 aa18.78■□□□□ 0.6
Trim3-201ENSMUST00000057525 Myh1Q5SX40 1942 aa18.77■□□□□ 0.6
Trim3-201ENSMUST00000057525 Pde4bB1AWC9 736 aa18.77■□□□□ 0.6
Trim3-201ENSMUST00000057525 Slc26a8Q8R0C3 999 aa18.77■□□□□ 0.6
Trim3-201ENSMUST00000057525 Mrc1Q61830 1456 aa18.77■□□□□ 0.59
Trim3-201ENSMUST00000057525 Dbndd1Q9CZ00 160 aa18.76■□□□□ 0.59
Trim3-201ENSMUST00000057525 Prl3d3A0A0M6L0J6 224 aa18.76■□□□□ 0.59
Trim3-201ENSMUST00000057525 Sult6b1P0CC03 303 aa18.76■□□□□ 0.59
Trim3-201ENSMUST00000057525 Tmem87bQ8BKU8 555 aa18.76■□□□□ 0.59
Trim3-201ENSMUST00000057525 Stk3Q9JI10 497 aa18.76■□□□□ 0.59
Trim3-201ENSMUST00000057525 Fkbp1aP26883 108 aaKnown RBP18.76■□□□□ 0.59
Trim3-201ENSMUST00000057525 SowahdQ8BY98 327 aa18.76■□□□□ 0.59
Trim3-201ENSMUST00000057525 Q9D2X8 372 aa18.76■□□□□ 0.59
Trim3-201ENSMUST00000057525 Popdc2Q9ES82 367 aa18.76■□□□□ 0.59
Trim3-201ENSMUST00000057525 Zbtb38Q3LR78 1197 aa18.75■□□□□ 0.59
Trim3-201ENSMUST00000057525 Tbc1d9Q3UYK3 1264 aa18.75■□□□□ 0.59
Trim3-201ENSMUST00000057525 Nkx1-2P42580 305 aa18.75■□□□□ 0.59
Trim3-201ENSMUST00000057525 Timm10P62073 90 aa18.75■□□□□ 0.59
Trim3-201ENSMUST00000057525 Mcm2P97310 904 aa18.75■□□□□ 0.59
Trim3-201ENSMUST00000057525 Fam198bQ3UPI1 517 aa18.75■□□□□ 0.59
Trim3-201ENSMUST00000057525 GorabQ8BRM2 368 aa18.75■□□□□ 0.59
Trim3-201ENSMUST00000057525 Cct4P80315 539 aaKnown RBP18.74■□□□□ 0.59
Trim3-201ENSMUST00000057525 CpzQ8R4V4 654 aa18.74■□□□□ 0.59
Trim3-201ENSMUST00000057525 Prl3d2F6R3P9 224 aa18.74■□□□□ 0.59
Trim3-201ENSMUST00000057525 Ipo8Q7TMY7 1010 aa18.74■□□□□ 0.59
Trim3-201ENSMUST00000057525 Amhr2Q8K592 568 aa18.74■□□□□ 0.59
Trim3-201ENSMUST00000057525 Ric1Q69ZJ7 1422 aa18.74■□□□□ 0.59
Trim3-201ENSMUST00000057525 C4bP01029 1738 aa18.74■□□□□ 0.59
Trim3-201ENSMUST00000057525 Rab3gap1Q80UJ7 981 aa18.74■□□□□ 0.59
Trim3-201ENSMUST00000057525 Atg9aQ68FE2 551 aa18.73■□□□□ 0.59
Trim3-201ENSMUST00000057525 Ankrd31A0A140LI88 1765 aa18.73■□□□□ 0.59
Trim3-201ENSMUST00000057525 EappQ5BU09 281 aa18.73■□□□□ 0.59
Trim3-201ENSMUST00000057525 Trim34bJ3QNR8 485 aa18.72■□□□□ 0.59
Trim3-201ENSMUST00000057525 Gpr182P43142 395 aa18.72■□□□□ 0.59
Trim3-201ENSMUST00000057525 Itga6Q61739 1091 aa18.72■□□□□ 0.59
Trim3-201ENSMUST00000057525 Gimap8Q75N62 688 aa18.72■□□□□ 0.59
Trim3-201ENSMUST00000057525 Hsp90ab1P11499 724 aaKnown RBP18.71■□□□□ 0.59
Trim3-201ENSMUST00000057525 RestQ8VIG1 1082 aa18.71■□□□□ 0.59
Trim3-201ENSMUST00000057525 EspnlQ3UYR4 1005 aa18.71■□□□□ 0.59
Trim3-201ENSMUST00000057525 Rgs17Q9QZB0 210 aa18.71■□□□□ 0.59
Trim3-201ENSMUST00000057525 Brpf1B2RRD7 1212 aa18.71■□□□□ 0.59
Trim3-201ENSMUST00000057525 Zkscan2G3X952 960 aa18.71■□□□□ 0.59
Trim3-201ENSMUST00000057525 Plcb3P51432 1234 aaKnown RBP18.71■□□□□ 0.59
Trim3-201ENSMUST00000057525 Fam228bQ497Q6 232 aa18.71■□□□□ 0.59
Trim3-201ENSMUST00000057525 Bag3Q9JLV1 577 aaKnown RBP18.71■□□□□ 0.59
Trim3-201ENSMUST00000057525 MeiocA2AG06 965 aa18.7■□□□□ 0.58
Trim3-201ENSMUST00000057525 Eya2O08575 532 aa18.7■□□□□ 0.58
Trim3-201ENSMUST00000057525 Eva1cP58659 440 aa18.7■□□□□ 0.58
Trim3-201ENSMUST00000057525 DbnlQ62418 436 aa18.7■□□□□ 0.58
Trim3-201ENSMUST00000057525 Dpf1Q9QX66 387 aa18.7■□□□□ 0.58
Trim3-201ENSMUST00000057525 Il1rapl2Q9ERS6 686 aa18.7■□□□□ 0.58
Trim3-201ENSMUST00000057525 Lama4P97927 1816 aa18.7■□□□□ 0.58
Trim3-201ENSMUST00000057525 Prr29B1ARI9 187 aa18.69■□□□□ 0.58
Trim3-201ENSMUST00000057525 Arid3aQ62431 601 aa18.69■□□□□ 0.58
Trim3-201ENSMUST00000057525 Arap2Q8BZ05 1703 aa18.69■□□□□ 0.58
Trim3-201ENSMUST00000057525 Ftl2P49945 183 aa18.68■□□□□ 0.58
Trim3-201ENSMUST00000057525 Brf1Q8CFK2 676 aa18.68■□□□□ 0.58
Trim3-201ENSMUST00000057525 Foxo3Q9WVH4 672 aa18.68■□□□□ 0.58
Trim3-201ENSMUST00000057525 ChgaP26339 463 aaKnown RBP18.68■□□□□ 0.58
Trim3-201ENSMUST00000057525 Pdia3P27773 505 aaKnown RBP18.68■□□□□ 0.58
Trim3-201ENSMUST00000057525 Tmc2Q8R4P4 888 aa18.68■□□□□ 0.58
Trim3-201ENSMUST00000057525 Kif2cQ922S8 721 aa18.68■□□□□ 0.58
Trim3-201ENSMUST00000057525 Bin2D3Z6Q9 489 aa18.68■□□□□ 0.58
Trim3-201ENSMUST00000057525 Nol8Q3UHX0 1147 aaKnown RBP18.68■□□□□ 0.58
Trim3-201ENSMUST00000057525 Zkscan8Q8BSL0 588 aa18.68■□□□□ 0.58
Trim3-201ENSMUST00000057525 Sf3a1Q8K4Z5 791 aaKnown RBP18.68■□□□□ 0.58
Trim3-201ENSMUST00000057525 Jdp2P97875 163 aa18.67■□□□□ 0.58
Trim3-201ENSMUST00000057525 Taf5lQ91WQ5 589 aa18.67■□□□□ 0.58
Trim3-201ENSMUST00000057525 Sh3bp5Q9Z131 463 aa18.67■□□□□ 0.58
Trim3-201ENSMUST00000057525 Hsp90b1P08113 802 aaKnown RBP18.67■□□□□ 0.58
Trim3-201ENSMUST00000057525 CpvlQ9D3S9 478 aa18.67■□□□□ 0.58
Trim3-201ENSMUST00000057525 CenppQ9CZ92 286 aa18.66■□□□□ 0.58
Trim3-201ENSMUST00000057525 Npy5rO70342 466 aa18.66■□□□□ 0.58
Trim3-201ENSMUST00000057525 1810065E05RikQ5NC41 235 aa18.66■□□□□ 0.58
Trim3-201ENSMUST00000057525 Vps54Q5SPW0 977 aa18.66■□□□□ 0.58
Trim3-201ENSMUST00000057525 Gja10Q9WUS4 505 aa18.66■□□□□ 0.58
Trim3-201ENSMUST00000057525 Rtkn2Q14B46 604 aa18.66■□□□□ 0.58
Trim3-201ENSMUST00000057525 Unc5clQ6R653 518 aa18.66■□□□□ 0.58
Trim3-201ENSMUST00000057525 Rbm5Q91YE7 815 aaKnown RBP18.65■□□□□ 0.58
Trim3-201ENSMUST00000057525 Rbm33Q9CXK9 1231 aaKnown RBP18.65■□□□□ 0.58
Trim3-201ENSMUST00000057525 Ubn2Q80WC1 1314 aa18.65■□□□□ 0.58
Trim3-201ENSMUST00000057525 Zfyve9A2A8R0 1397 aa18.65■□□□□ 0.58
Trim3-201ENSMUST00000057525 Ppp6r3Q922D4 844 aa18.64■□□□□ 0.57
Trim3-201ENSMUST00000057525 Ltv1Q6NSQ7 470 aaKnown RBP18.63■□□□□ 0.57
Trim3-201ENSMUST00000057525 Ppp4r3aQ6P2K6 820 aa18.63■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms