RNA–Protein interactions for RNA: ENSMUST00000057254.5

Ubqln3-201, Transcript of Ubiquilin-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubqln3, Length 2,376 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln3-201ENSMUST00000057254 Top1mtQ8R4U6 593 aa10.72□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 LlphQ9D945 130 aaKnown RBP10.72□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Stard3nlQ9DCI3 235 aa10.72□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Ankrd31A0A140LI88 1765 aa10.72□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Ppfia1B2RXQ2 1266 aa10.72□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 NexnQ7TPW1 607 aa10.72□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Ncoa5Q91W39 579 aaKnown RBP10.72□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Bcl11aQ9QYE3 773 aa10.72□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Zeb2Q9R0G7 1215 aa10.72□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Vsig10D3YX43 558 aa10.71□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Rasa1E9PYG6 1038 aa10.71□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Anxa1P10107 346 aaKnown RBP10.71□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Ddx46Q569Z5 1032 aaKnown RBP10.71□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Ifit2Q64112 472 aa10.71□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 DekQ7TNV0 380 aaKnown RBP10.71□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Bsdc1Q80Y55 427 aa10.71□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Gigyf1Q99MR1 1044 aaKnown RBP10.71□□□□□ -0.69
Ubqln3-201ENSMUST00000057254 Ssc5dQ8BV57 1371 aa10.71□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 AtrnQ9WU60 1428 aa10.71□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Strn4P58404 760 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 NpeppsQ11011 920 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ankrd23Q812A3 306 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Mylk2Q8VCR8 613 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Fam213aQ9CYH2 218 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Pus3Q9JI38 481 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Arap2Q8BZ05 1703 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Prl3d3A0A0M6L0J6 224 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ugt1a5B2RT14 529 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Cyp19a1P28649 503 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Cpa2Q504N0 417 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ggt6Q6PDE7 497 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Tceanc2Q8R2M0 207 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Cdca7lQ922M5 438 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ehd4Q9EQP2 541 aa10.7□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Rbbp8nlA2ABX0 614 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Tom1O88746 492 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Hspa1lP16627 641 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Gjb2Q00977 226 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Clca2Q8BG22 942 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Bag4Q8CI61 457 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Pof1bQ8K4L4 587 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Myh1Q5SX40 1942 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Rbm8a2A0A0N4SUH6 174 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Anapc15P60007 132 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ltv1Q6NSQ7 470 aaKnown RBP10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Zkscan1Q8BGS3 561 aaKnown RBP10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Miga2Q8BK03 593 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 AnlnQ8K298 1121 aaKnown RBP10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Tmc2Q8R4P4 888 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Rbm8aQ9CWZ3 174 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Add2Q9QYB8 725 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ak2Q9WTP6 239 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Abca3Q8R420 1704 aa10.69□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Elmsan1E9Q2I4 1089 aaKnown RBP10.68□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Mcm4P49717 862 aa10.68□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Rufy3Q9D394 469 aa10.68□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Kndc1Q0KK55 1742 aa10.68□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Cacna1sQ02789 1880 aa10.68□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ddb1Q3U1J4 1140 aaKnown RBP10.68□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Utp18Q5SSI6 552 aaKnown RBP10.68□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 AbraQ8BUZ1 375 aa10.68□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Lrp6O88572 1613 aa10.67□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Prl3d2F6R3P9 224 aa10.67□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Pkp1P97350 728 aaKnown RBP10.67□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ddx11Q6AXC6 880 aa10.67□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Nol12Q8BG17 217 aa10.67□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Golim4Q8BXA1 655 aa10.67□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Eya2O08575 532 aa10.67□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Cyp2d10P24456 504 aa10.67□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Filip1lQ6P6L0 1131 aa10.67□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Jmjd4Q8BFT6 427 aa10.67□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Tti2Q8BGV4 512 aa10.67□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Sgsm1Q8BPQ7 1093 aa10.67□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Greb1lB9EJV3 1913 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Slc4a1P04919 929 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 NfkbibQ60778 359 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Rab3gap1Q80UJ7 981 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ubxn10Q8BG34 277 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Mrpl50Q8VDT9 159 aaKnown RBP10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Polr3dQ91WD1 398 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ginm1Q91WR6 327 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 MetP16056 1379 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 MecomP14404 1042 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Nlrp1aQ2LKU9 1182 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Sf3b2Q3UJB0 878 aaKnown RBP10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 PogkQ80TC5 607 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Lmbrd2Q8C561 694 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ccdc7Q9D541 371 aa10.66□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Hoxa7P02830 229 aa10.65□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ercc3P49135 783 aa10.65□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 ZyxQ62523 564 aa10.65□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ppp4r3aQ6P2K6 820 aa10.65□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Nlrp3Q8R4B8 1033 aa10.65□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Ccne2Q9Z238 404 aa10.65□□□□□ -0.7
Ubqln3-201ENSMUST00000057254 Bicdl1A0JNT9 577 aa10.65□□□□□ -0.71
Ubqln3-201ENSMUST00000057254 Prr5lA2AVJ5 370 aa10.65□□□□□ -0.71
Ubqln3-201ENSMUST00000057254 Ints3Q7TPD0 1041 aaKnown RBP10.65□□□□□ -0.71
Ubqln3-201ENSMUST00000057254 Sp8Q8BMJ8 486 aa10.65□□□□□ -0.71
Ubqln3-201ENSMUST00000057254 Fam102bQ8BQS4 339 aa10.65□□□□□ -0.71
Ubqln3-201ENSMUST00000057254 KinQ8K339 391 aa10.65□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms