RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 CenppQ9CZ92 286 aa11.27□□□□□ -0.61
Syne1-201ENSMUST00000041639 PaskQ8CEE6 1383 aa11.27□□□□□ -0.61
Syne1-201ENSMUST00000041639 Camsap2Q8C1B1 1461 aa11.27□□□□□ -0.61
Syne1-201ENSMUST00000041639 Calml4Q91WQ9 153 aa11.27□□□□□ -0.61
Syne1-201ENSMUST00000041639 Brd1E9PZ26 1189 aaKnown RBP11.27□□□□□ -0.61
Syne1-201ENSMUST00000041639 Igflr1Q3U4N7 345 aa11.27□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ctnna2Q61301 953 aa11.27□□□□□ -0.61
Syne1-201ENSMUST00000041639 RarsQ9D0I9 660 aaKnown RBP11.27□□□□□ -0.61
Syne1-201ENSMUST00000041639 Cfap157Q0VFX2 523 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Mctp2Q5RJH2 878 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 4921504E06RikQ8CET2 560 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Lmbr1lQ9D1E5 489 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 LifrP42703 1092 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Spg7Q3ULF4 781 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Sun3Q5SS91 320 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 RragbQ6NTA4 374 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 ClasrpQ8CFC7 668 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Slc14a2Q8R4T9 930 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Cnot6lQ8VEG6 555 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Cfap53Q9D439 514 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 WtapQ9ER69 396 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Gadd45bP22339 160 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Mex3cQ05A36 652 aaKnown RBP11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ano6Q6P9J9 911 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ctdp1Q7TSG2 960 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 ParvgQ9ERD8 331 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Cyp4f39Q8BGU0 532 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Bloc1s4Q8VED2 215 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Zbtb43Q9DAI4 467 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 SynmQ70IV5 1561 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Pik3c2gO70167 1506 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Tyro3P55144 880 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Zswim4Q8C7B8 1101 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Brd3Q8K2F0 726 aaKnown RBP11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Top2bQ64511 1612 aa11.26□□□□□ -0.61
Syne1-201ENSMUST00000041639 Tbc1d8bA3KGB4 1114 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Izumo3A6PWV3 263 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Pde4dQ01063 747 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 IqcgQ80W32 419 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ddx27Q921N6 760 aaKnown RBP11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Crocc2F6XLV1 1638 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Syt1P46096 421 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ift122Q6NWV3 1182 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Pik3ap1Q9EQ32 811 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Rad50P70388 1312 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Pa2g4P50580 394 aaKnown RBP11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Dmrt2Q8BG36 561 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Plekho1Q9JIY0 408 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Pkd2l2Q9JLG4 621 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Uchl5Q9WUP7 329 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Nphp3Q7TNH6 1325 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Igf1rQ60751 1373 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ift88Q61371 824 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ano1Q8BHY3 960 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ppfibp1Q8C8U0 969 aaKnown RBP11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Gdpd2Q9ESM6 539 aa11.25□□□□□ -0.61
Syne1-201ENSMUST00000041639 Usp5P56399 858 aaKnown RBP11.24□□□□□ -0.61
Syne1-201ENSMUST00000041639 Atp8b2P98199 1209 aa11.24□□□□□ -0.61
Syne1-201ENSMUST00000041639 Fam76aQ922G2 307 aa11.24□□□□□ -0.61
Syne1-201ENSMUST00000041639 Sbno1Q689Z5 1390 aa11.24□□□□□ -0.61
Syne1-201ENSMUST00000041639 Grm8P47743 908 aa11.24□□□□□ -0.61
Syne1-201ENSMUST00000041639 Tmem266Q8BZB3 538 aa11.24□□□□□ -0.61
Syne1-201ENSMUST00000041639 Mrps25Q9D125 171 aaKnown RBP11.24□□□□□ -0.61
Syne1-201ENSMUST00000041639 AmfrQ9R049 643 aa11.24□□□□□ -0.61
Syne1-201ENSMUST00000041639 Slc1a4O35874 532 aa11.24□□□□□ -0.61
Syne1-201ENSMUST00000041639 Hsf2bpQ9D4G2 338 aa11.24□□□□□ -0.61
Syne1-201ENSMUST00000041639 Slx4Q6P1D7 1565 aa11.24□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ces1aE9PYP1 563 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Lmod1Q8BVA4 595 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Amotl2Q8K371 772 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Nip7Q9CXK8 180 aaKnown RBP11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 AU019823E9PUQ3 292 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Cetn1P41209 172 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Nap1l2P51860 460 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Nucb1Q02819 459 aaKnown RBP11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ift74Q8BKE9 600 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ccdc122Q8BVN0 290 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Mcmdc2E9Q956 681 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Esyt1Q3U7R1 1092 aaKnown RBP11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 TchpQ3TVW5 497 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Mlh3A0A1Y7VMP7 1443 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Znf18Q810A1 556 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ranbp6Q8BIV3 1105 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Frmpd2A0A140LI67 1392 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 NpcdF8VQB8 469 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Dact3Q0PHV7 610 aa11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ppp1r10Q80W00 888 aaKnown RBP11.23□□□□□ -0.61
Syne1-201ENSMUST00000041639 Jarid2Q62315 1234 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Tbc1d8Q9Z1A9 1134 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Aldh8a1Q8BH00 487 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Kcnn1Q9EQR3 537 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Hip1rQ9JKY5 1068 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Sptlc2P97363 560 aaKnown RBP11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 ArsiQ32KI9 573 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ctage5Q8R311 779 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Hs2st1Q8R3H7 356 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Amotl1Q9D4H4 968 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 DonsonQ9QXP4 560 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Kdm3aQ6PCM1 1323 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Slc4a4O88343 1079 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms