RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Gigyf1Q99MR1 1044 aaKnown RBP9.4□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Slx4ipQ9D7Y9 413 aa9.4□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Kcnh4A2A5F7 1018 aa9.4□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 CgnP59242 1191 aa9.4□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Gjb2Q00977 226 aa9.4□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Q9D9S1 216 aa9.4□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Zkscan16A2ALW2 728 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ppfia1B2RXQ2 1266 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Smarce1O54941 411 aaKnown RBP9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Rnf20Q5DTM8 973 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 St18Q80TY4 1045 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 MypopQ8R4U1 393 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Prr5lA2AVJ5 370 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 InhbeO08717 350 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ell2Q3UKU1 639 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Morc2aQ69ZX6 1030 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ankrd13dQ6PD24 605 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Lmbrd2Q8C561 694 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Rhot2Q8JZN7 620 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 KinQ8K339 391 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Noc3lQ8VI84 807 aaKnown RBP9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Polr3dQ91WD1 398 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Rbm33Q9CXK9 1231 aaKnown RBP9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Pmfbp1Q9WVQ0 1022 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Atp6v1dP57746 247 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 DbnlQ62418 436 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Zkscan8Q8BSL0 588 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 CpvlQ9D3S9 478 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 PhaxQ9JJT9 385 aaKnown RBP9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Atp10bB1AWN4 1474 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 InsrrQ9WTL4 1300 aa9.39□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Eya2O08575 532 aa9.38□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Taf5lQ91WQ5 589 aa9.38□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Brwd3A2AHJ4 1799 aa9.38□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 AnlnQ8K298 1121 aaKnown RBP9.38□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Abcc4E9Q236 1325 aa9.38□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ahnak2E9PYB0 1738 aaKnown RBP9.38□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 CrcpO35427 148 aa9.38□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Washc4Q3UMB9 1173 aa9.38□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ints3Q7TPD0 1041 aaKnown RBP9.38□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Rbm8a2A0A0N4SUH6 174 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Cyp2c23E9Q5K4 494 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 CltaO08585 235 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ppfibp2O35711 882 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Sema6bO54951 886 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Kif20aP97329 887 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Atp2b3Q0VF55 1220 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Hand2Q61039 217 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Kif2cQ922S8 721 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Rbm8aQ9CWZ3 174 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ltbp4Q8K4G1 1666 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Abl1P00520 1123 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Pcmtd1P59913 357 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Itga6Q61739 1091 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ssh1Q76I79 1042 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Krt25Q8VCW2 446 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Smc3Q9CW03 1217 aaKnown RBP9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Thsd7aQ69ZU6 1645 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Znf326O88291 580 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Rbm17Q8JZX4 405 aaKnown RBP9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Mylk2Q8VCR8 613 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Popdc2Q9ES82 367 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Slit1Q80TR4 1531 aa9.37□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Irgm2A0A140LIF8 407 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Stox1B2RQL2 990 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Prl3d2F6R3P9 224 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Spty2d1Q68FG3 682 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Zkscan1Q8BGS3 561 aaKnown RBP9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Taok3Q8BYC6 898 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Tmem143Q8VD26 458 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Pus3Q9JI38 481 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Slit2Q9R1B9 1521 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 PtmaP26350 111 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ftl2P49945 183 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Fam228bQ497Q6 232 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ifit2Q64112 472 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Pram1Q6BCL1 675 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 AK157302I3ITR1 129 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Casp1P29452 402 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Fam170aQ66LM6 333 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Nlrp9bQ66X22 1003 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ppp4r3aQ6P2K6 820 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Gimap8Q75N62 688 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Lmod1Q8BVA4 595 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 CrebrfQ8CDG5 640 aaKnown RBP9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Dbndd1Q9CZ00 160 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Isca1Q9D924 129 aa9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Mad1l1Q9WTX8 717 aaKnown RBP9.36□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Erbb4Q61527 1308 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 DccP70211 1447 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Gpr182P43142 395 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Cers3Q1A3B0 383 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Zbtb38Q3LR78 1197 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Clca2Q8BG22 942 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Gdpd2Q9ESM6 539 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Trip6Q9Z1Y4 480 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ptpn23Q6PB44 1692 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Dhx16G3X8X0 1044 aaKnown RBP9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Tmem67Q8BR76 992 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Plekho1Q9JIY0 408 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms