RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Slc26a8Q8R0C3 999 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Mroh7A2AVR2 1279 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Ampd3O08739 766 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Rnf41Q8BH75 317 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Krt23Q99PS0 422 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Cep128Q8BI22 1102 aa15.87■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Ebag9Q9D0V7 213 aa15.87■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Stx6Q9JKK1 255 aa15.87■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Rassf2Q8BMS9 326 aa15.87■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Tubb4aQ9D6F9 444 aa15.87■□□□□ 0.13
Col5a1-201ENSMUST00000028280 GlmnQ8BZM1 596 aa15.87■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Cdan1Q8CC12 1239 aa15.87■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Atp2a2O55143 1044 aaKnown RBP15.87■□□□□ 0.13
Col5a1-201ENSMUST00000028280 SkiQ60698 725 aa15.87■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Ankib1Q6ZPS6 1085 aa15.87■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Kif21aQ9QXL2 1672 aa15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 IkbkgO88522 412 aa15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Gtpbp10Q8K013 366 aa15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Nphp3Q7TNH6 1325 aa15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Tagap1P0CAX8 505 aa15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Fgfr1opQ66JX5 399 aa15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Zfpm1O35615 995 aa15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Arhgap24Q8C4V1 747 aa15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Il16O54824 1322 aa15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Fam204aQ8C6C7 236 aa15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Golga1Q9CW79 758 aa15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Bloc1s2Q9CWG9 143 aa15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Zmym4A2A791 1549 aaKnown RBP15.86■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Zfp644E9QA22 1323 aa15.85■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Arfgap2Q99K28 520 aa15.85■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Ccdc91Q9D8L5 442 aa15.85■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Krt77Q6IFZ6 572 aa15.85■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Tpx2A2APB8 745 aaKnown RBP15.85■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Mtmr3Q8K296 1196 aa15.85■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Ppp1r12cQ3UMT1 782 aa15.85■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Tnnc1P19123 161 aa15.85■□□□□ 0.13
Col5a1-201ENSMUST00000028280 NpcdF8VQB8 469 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Ssrp1Q08943 708 aaKnown RBP15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Ctdp1Q7TSG2 960 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Tmem67Q8BR76 992 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Psmd6Q99JI4 389 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Ccdc129Q14B48 1034 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Supt6hQ62383 1726 aaKnown RBP15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Duox2A2AQ99 1517 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 VimP20152 466 aaKnown RBP15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Usp25P57080 1055 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Tmx1Q8VBT0 278 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Cep83Q9D5R3 692 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Ube3aO08759 870 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Ddx49Q4FZF3 480 aaKnown RBP15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Rasa1E9PYG6 1038 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Slc7a3P70423 618 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Mctp2Q5RJH2 878 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Rrs1Q9CYH6 365 aaKnown RBP15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Rai14Q9EP71 979 aaKnown RBP15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Gsta4P24472 222 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Cct6bQ61390 531 aa15.84■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Pcf11G3X9Z4 1553 aa15.83■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Eps15P42567 897 aa15.83■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Wdhd1P59328 1117 aa15.83■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Traf3ip1Q149C2 625 aa15.83■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Filip1Q9CS72 1211 aa15.83■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Mis12Q9CY25 206 aa15.83■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Pkd2l2Q9JLG4 621 aa15.83■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Cct2P80314 535 aaKnown RBP15.83■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Mrpl44Q9CY73 333 aaKnown RBP15.83■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Sclt1G5E861 688 aa15.83■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Arap1Q4LDD4 1452 aa15.83■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ublcp1Q8BGR9 318 aa15.83■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ccdc14Q8K2J4 934 aa15.83■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Eif3bQ8JZQ9 803 aaKnown RBP15.83■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Hmg20bQ9Z104 317 aa15.83■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Cfap157Q0VFX2 523 aa15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 EsrrbQ61539 433 aa15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Sdad1Q80UZ2 687 aaKnown RBP15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Gbp6A0A0G2JDV3 611 aa15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Gm43302L7N1X8 611 aa15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Syt1P46096 421 aa15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Cep63Q3UPP8 700 aa15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Cfap73J3QPZ5 306 aa15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Krt8P11679 490 aaKnown RBP15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Tubb5P99024 444 aaKnown RBP15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Nop56Q9D6Z1 580 aaKnown RBP15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 TmpoQ61033 693 aaKnown RBP15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Evi5lH3BKQ3 813 aa15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Stmn1P54227 149 aaKnown RBP15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Klhl30Q8C3F7 581 aa15.82■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ankrd40Q5SUE8 363 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ccdc25Q78PG9 208 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ttc12Q8BW49 704 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Tmem266Q8BZB3 538 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Map3k5O35099 1380 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Kdm3aQ6PCM1 1323 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Zfp213E9QAW0 468 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Nedd9O35177 833 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ift88Q61371 824 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Smc5Q8CG46 1101 aaKnown RBP15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 PrphP15331 475 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Rbm33Q9CXK9 1231 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms