RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Gadd45bP22339 160 aa19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Gbp9Q8BTS3 619 aa19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Cfap53Q9D439 514 aa19.21■□□□□ 0.67
Col17a1-201ENSMUST00000026045 Trim34bJ3QNR8 485 aa19.2■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Prl7d1P04769 244 aa19.2■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Tex13c2A0A0G2JGA3 530 aa19.2■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Q4VA45 678 aa19.2■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Tubb4bP68372 445 aaKnown RBP19.2■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Naa15Q80UM3 865 aaKnown RBP19.2■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Fsd2Q8BZ52 692 aa19.2■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Iffo1Q8BXL9 562 aa19.19■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Six6os1Q9CTN5 574 aa19.19■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Bag3Q9JLV1 577 aaKnown RBP19.19■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Bin1O08539 588 aaKnown RBP19.19■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Ehmt1Q5DW34 1296 aa19.19■□□□□ 0.66
Col17a1-201ENSMUST00000026045 EsrrbQ61539 433 aa19.19■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Mum1Q6DID5 682 aa19.19■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Eftud2O08810 971 aaKnown RBP19.19■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Fam13aQ8BGI4 693 aa19.19■□□□□ 0.66
Col17a1-201ENSMUST00000026045 AU019823E9PUQ3 292 aa19.18■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Ms4a1P19437 291 aa19.18■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Ccdc148Q6P5U8 527 aa19.18■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Sept14Q9DA97 430 aa19.18■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Fam83gQ5SWY7 812 aa19.18■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Ccdc162pQ0VG85 912 aa19.18■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Map3k11Q80XI6 850 aa19.18■□□□□ 0.66
Col17a1-201ENSMUST00000026045 ApobrQ8VBT6 942 aa19.18■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Il1rapl2Q9ERS6 686 aa19.18■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Tmem132eQ6IEE6 982 aa19.18■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Zswim4Q8C7B8 1101 aa19.18■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Themis2Q91YX0 663 aa19.18■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Tyro3P55144 880 aa19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Ltv1Q6NSQ7 470 aaKnown RBP19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Rassf10Q8BL43 508 aa19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 AidaQ8C4Q6 305 aa19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Ppm1fQ8CGA0 452 aa19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Tubb5P99024 444 aaKnown RBP19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Map3k2Q61083 619 aa19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Gbp1Q01514 589 aa19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Rufy2Q8R4C2 606 aa19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Zkscan4Q5SZT6 480 aa19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Abca5Q8K448 1642 aa19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Cfap74Q3UY96 1578 aa19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Wdr3Q8BHB4 942 aaKnown RBP19.17■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Frmpd2A0A140LI67 1392 aa19.16■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Tex35Q14BK3 207 aa19.16■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Irf9Q61179 399 aa19.16■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Spats2Q8K1N4 545 aaKnown RBP19.16■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Pola1P33609 1465 aa19.16■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Syt1P46096 421 aa19.16■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Bms1Q6PGF5 1284 aaKnown RBP19.16■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Trim34aQ99PP6 485 aa19.16■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Sbno1Q689Z5 1390 aa19.16■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Gm28510A0A087WP28 240 aa19.16■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Hoxb7P09024 217 aa19.16■□□□□ 0.66
Col17a1-201ENSMUST00000026045 ZfxP17012 799 aa19.16■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Erbb3Q61526 1339 aa19.15■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Zap70P43404 618 aa19.15■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Gm156Q58A37 223 aa19.15■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Tshz1Q5DTH5 1084 aa19.15■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Znf131Q8K3J5 619 aa19.15■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Gigyf1Q99MR1 1044 aaKnown RBP19.15■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Mapk8ip1Q9WVI9 707 aa19.15■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Naip7Q9JIB3 1402 aa19.14■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Eif4a2P10630 407 aa19.14■□□□□ 0.66
Col17a1-201ENSMUST00000026045 LifrP42703 1092 aa19.14■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Ndufab1Q9CR21 156 aa19.14■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Lonp2Q9DBN5 852 aa19.14■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Rapgef4Q9EQZ6 1011 aa19.14■□□□□ 0.66
Col17a1-201ENSMUST00000026045 Vamp4O70480 141 aa19.14■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Hdhd2Q3UGR5 259 aa19.14■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Soga3Q6NZL0 945 aa19.14■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Polr3dQ91WD1 398 aa19.14■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Nup160Q9Z0W3 1402 aaKnown RBP19.14■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Rnf34Q99KR6 376 aa19.14■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Zbtb12Q9Z150 459 aa19.14■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Slc5a1Q8C3K6 665 aa19.14■□□□□ 0.65
Col17a1-201ENSMUST00000026045 ImmtQ8CAQ8 757 aaKnown RBP19.14■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Zfpm1O35615 995 aa19.13■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Rassf2Q8BMS9 326 aa19.13■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Krt84Q99M73 603 aa19.13■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Abcc1O35379 1528 aa19.13■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Abcc2Q8VI47 1543 aa19.13■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Irx1P81068 480 aa19.13■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Asxl2Q8BZ32 1370 aa19.13■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Nol11Q8BJW5 723 aaKnown RBP19.13■□□□□ 0.65
Col17a1-201ENSMUST00000026045 LlphQ9D945 130 aaKnown RBP19.13■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Top1Q04750 767 aaKnown RBP19.12■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Rbbp5Q8BX09 538 aaKnown RBP19.12■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Elf2Q9JHC9 593 aa19.12■□□□□ 0.65
Col17a1-201ENSMUST00000026045 SltmQ8CH25 1031 aaKnown RBP19.12■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Gcc2Q8CHG3 1679 aa19.12■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Fbf1A2A870 1173 aa19.12■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Bach2P97303 839 aa19.12■□□□□ 0.65
Col17a1-201ENSMUST00000026045 PalldQ9ET54 1408 aa19.12■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Diaph1O08808 1255 aa19.11■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Tsga10Q6NY15 697 aa19.11■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Tmem94Q7TSH8 1360 aa19.11■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Cdkl5Q3UTQ8 938 aa19.11■□□□□ 0.65
Col17a1-201ENSMUST00000026045 Sel1lQ9Z2G6 790 aa19.11■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms