RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Ier5O89113 308 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Trim30aP15533 496 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 NapbP28663 298 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 HellsQ60848 821 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Slx1bQ8BX32 270 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Golim4Q8BXA1 655 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 DccP70211 1447 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 IghaA0A0A6YXW6 389 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 Becn1O88597 448 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 Gpatch11Q3UFS4 262 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 Fsd2Q8BZ52 692 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 Myo1bP46735 1107 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 Trim29Q8R2Q0 587 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 Trim27Q62158 513 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 Tpm4Q6IRU2 248 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 Cps1Q8C196 1500 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 NmiO35309 314 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 Atf5O70191 283 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 Atp1b3P97370 278 aa9.42□□□□□ -0.9
Lig3-201ENSMUST00000021039 Duxf3A0A0N4SV92 674 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Syde2E9PUP1 1314 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Col1a2Q01149 1372 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 PplQ9R269 1755 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Dctn1O08788 1281 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Il1rapl2Q9ERS6 686 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Prl3d3A0A0M6L0J6 224 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Tpm2P58774 284 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Zbtb40Q6PCS8 1258 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Tmod2Q9JKK7 351 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Lmtk3Q5XJV6 1424 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Irgm2A0A140LIF8 407 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Gigyf1Q99MR1 1044 aaKnown RBP9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Rdm1Q9CQK3 281 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Letm1Q9Z2I0 738 aa9.41□□□□□ -0.9
Lig3-201ENSMUST00000021039 Map7d2A2AG50 781 aa9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 ChgaP26339 463 aaKnown RBP9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 Pa2g4P50580 394 aaKnown RBP9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 Rnf41Q8BH75 317 aa9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 Nwd1A6H603 1563 aa9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 Kifc2O08672 792 aa9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 Chl1P70232 1209 aa9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 CoilQ5SU73 570 aa9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 Ppip5k2Q6ZQB6 1129 aa9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 Afg3l2Q8JZQ2 802 aaKnown RBP9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 Chmp4cQ9D7F7 232 aa9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 Nup133Q8R0G9 1155 aa9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 Plagl1Q9JLQ4 704 aa9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 P2rx7Q9Z1M0 595 aa9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 IkQ9Z1M8 557 aaKnown RBP9.4□□□□□ -0.9
Lig3-201ENSMUST00000021039 Cspp1B2RX88 1205 aa9.4□□□□□ -0.91
Lig3-201ENSMUST00000021039 Olfr247E9PVJ7 320 aa9.4□□□□□ -0.91
Lig3-201ENSMUST00000021039 Olfr819K7N727 320 aa9.4□□□□□ -0.91
Lig3-201ENSMUST00000021039 Aifm3Q3TY86 605 aa9.4□□□□□ -0.91
Lig3-201ENSMUST00000021039 Zbtb3Q91X45 518 aa9.4□□□□□ -0.91
Lig3-201ENSMUST00000021039 Tnni2P13412 182 aa9.4□□□□□ -0.91
Lig3-201ENSMUST00000021039 Kif3aP28741 701 aa9.4□□□□□ -0.91
Lig3-201ENSMUST00000021039 Ufl1Q8CCJ3 793 aaKnown RBP9.4□□□□□ -0.91
Lig3-201ENSMUST00000021039 LifrP42703 1092 aa9.39□□□□□ -0.91
Lig3-201ENSMUST00000021039 Ptcd1Q8C2E4 695 aaKnown RBP9.39□□□□□ -0.91
Lig3-201ENSMUST00000021039 PigbQ9JJQ0 542 aa9.39□□□□□ -0.91
Lig3-201ENSMUST00000021039 Sel1lQ9Z2G6 790 aa9.39□□□□□ -0.91
Lig3-201ENSMUST00000021039 Eya2O08575 532 aa9.39□□□□□ -0.91
Lig3-201ENSMUST00000021039 Cdkl5Q3UTQ8 938 aa9.39□□□□□ -0.91
Lig3-201ENSMUST00000021039 Glipr1l2Q9CQ35 332 aa9.39□□□□□ -0.91
Lig3-201ENSMUST00000021039 Aldh8a1Q8BH00 487 aa9.39□□□□□ -0.91
Lig3-201ENSMUST00000021039 A0A1L1SQF0 893 aa9.39□□□□□ -0.91
Lig3-201ENSMUST00000021039 Rbbp8nlA2ABX0 614 aa9.39□□□□□ -0.91
Lig3-201ENSMUST00000021039 MthfsQ9D110 203 aa9.39□□□□□ -0.91
Lig3-201ENSMUST00000021039 Sult6b1P0CC03 303 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Casp1P29452 402 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Irs4Q9Z0Y7 1216 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 A0A1W2P7S8 802 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Cdc5lQ6A068 802 aaKnown RBP9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Trim52Q8CDV4 233 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Rimbp3Q3V0F0 1606 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 FosbP13346 338 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Zbtb38Q3LR78 1197 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Tmem67Q8BR76 992 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Zkscan8Q8BSL0 588 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Arhgap33Q80YF9 1305 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Kif20aP97329 887 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Pms1Q8K119 917 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 FanclQ9CR14 375 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Smc2Q8CG48 1191 aaKnown RBP9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 MypopQ8R4U1 393 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Tbc1d7Q9D0K0 293 aa9.38□□□□□ -0.91
Lig3-201ENSMUST00000021039 Pet2A2AHY8 747 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Wdr63B2RY71 923 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Ripply1Q2WG77 201 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Atp6v1aP50516 617 aaKnown RBP9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Atp8a2P98200 1148 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Cnksr2Q80YA9 1032 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Anapc15-psA0A140T8L6 141 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Zscan20B2KFW1 1030 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Usp48Q3V0C5 1052 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Zbtb1Q91VL9 713 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Xrcc4Q924T3 326 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Dnajc2P54103 621 aaKnown RBP9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Adam1aQ60813 791 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Kiaa0319lQ8K135 1048 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms