RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 FAM26DQ5JW98 314 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 PDSS1Q5T2R2 415 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 FAM124AQ86V42 546 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 ZNF440Q8IYI8 595 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 LILRB2Q8N423 598 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 B3GNT7Q8NFL0 401 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 OR5AK2Q8NH90 309 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 FNDC9Q8TBE3 224 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 ZBTB8AQ96BR9 441 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 SLC38A3Q99624 504 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 ALG8Q9BVK2 526 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 CNTNAP3Q9BZ76 1288 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 NMNAT1Q9HAN9 279 aaPredicted RBP8.29□□□□□ -1.08
PATJ-216ENST00000635214 PLEKHA3Q9HB20 300 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 HHATLQ9HCP6 504 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 EMC7Q9NPA0 242 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 PRDM9Q9NQV7 894 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 SMCO4Q9NRQ5 59 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 PRODH2Q9UF12 536 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 ZNF223Q9UK11 482 aaPredicted RBP8.29□□□□□ -1.08
PATJ-216ENST00000635214 PCTPQ9UKL6 214 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 COL4A1P02462 1669 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 A0A1B0GV50 99 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 LATO43561 262 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 HCRTR2O43614 444 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 RAB40ALP0C0E4 278 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 HOXA11P31270 313 aaPredicted RBP8.29□□□□□ -1.08
PATJ-216ENST00000635214 CAV2P51636 162 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 ZNF136P52737 540 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 HTD2P86397 168 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 CYP27C1Q4G0S4 372 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 RAB40AQ8WXH6 277 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 ZNF300Q96RE9 604 aaPredicted RBP8.29□□□□□ -1.08
PATJ-216ENST00000635214 KCNK13Q9HB14 408 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 PLCXD1Q9NUJ7 323 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 SCAMP2O15127 329 aaKnown RBP8.29□□□□□ -1.08
PATJ-216ENST00000635214 KCNJ13O60928 360 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 GBAP04062 536 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 TP53P04637 393 aaPredicted RBP8.29□□□□□ -1.08
PATJ-216ENST00000635214 GM2AP17900 193 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 GABRB3P28472 473 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 APOFQ13790 326 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 CPZQ66K79 652 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 PGM2L1Q6PCE3 622 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 ARL14EPQ8N8R7 260 aaPredicted RBP8.29□□□□□ -1.08
PATJ-216ENST00000635214 OR13C3Q8NGS6 347 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 NETO1Q8TDF5 533 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 SMPDL3BQ92485 455 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 DNTTIP1Q9H147 329 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 IL21RQ9HBE5 538 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 INPP5EQ9NRR6 644 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 GNG13Q9P2W3 67 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 COPS3Q9UNS2 423 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 UGT2A1Q9Y4X1 527 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 LSM5Q9Y4Y9 91 aaKnown RBP8.29□□□□□ -1.08
PATJ-216ENST00000635214 CACNG3O60359 315 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 SDC3O75056 442 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 SLC11A1P49279 550 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 CLCNKAP51800 687 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 CAV3P56539 151 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 SH3BP2P78314 561 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 ZNF425Q6IV72 752 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 NIPAL3Q6P499 406 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 SLC51BQ86UW2 128 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 NUP43Q8NFH3 380 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 ST7LQ8TDW4 575 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 DPH2Q9BQC3 489 aaPredicted RBP8.29□□□□□ -1.08
PATJ-216ENST00000635214 SIAEQ9HAT2 523 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 FZD3Q9NPG1 666 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 ICKQ9UPZ9 632 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 ADAM18Q9Y3Q7 739 aa8.29□□□□□ -1.08
PATJ-216ENST00000635214 EDDM13A0A1B0GTR0 161 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 C1orf226A1L170 272 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 CTDSP2O14595 271 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 ACP5P13686 325 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 ACVRL1P37023 503 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 ACTR1BP42025 376 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 POLR2HP52434 150 aaKnown RBP8.28□□□□□ -1.08
PATJ-216ENST00000635214 VSX2P58304 361 aaPredicted RBP8.28□□□□□ -1.08
PATJ-216ENST00000635214 ACTR1AP61163 376 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 HTRA4P83105 476 aaPredicted RBP8.28□□□□□ -1.08
PATJ-216ENST00000635214 GPM6BQ13491 265 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 STEAP3Q658P3 488 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 CGB2Q6NT52 195 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 PLBD1Q6P4A8 553 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 LRFN4Q6PJG9 635 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 SERPINA11Q86U17 422 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 ZNF280BQ86YH2 543 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 CLDN22Q8N7P3 220 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 OR5T1Q8NG75 326 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 OR4K17Q8NGC6 315 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 OR10K1Q8NGX5 313 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 OR5W2Q8NH69 310 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 TAAR8Q969N4 342 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 JSRP1Q96MG2 331 aaPredicted RBP8.28□□□□□ -1.08
PATJ-216ENST00000635214 UHRF1Q96T88 793 aaPredicted RBP8.28□□□□□ -1.08
PATJ-216ENST00000635214 PNO1Q9NRX1 252 aaKnown RBP8.28□□□□□ -1.08
PATJ-216ENST00000635214 RNF215Q9Y6U7 377 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 TSPAN11A1L157 253 aa8.28□□□□□ -1.08
PATJ-216ENST00000635214 UPK3BL1B0FP48 263 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms