RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 C5orf34Q96MH7 638 aa21.55■■□□□ 1.04
RAB40C-212ENST00000569575 KLF13Q9Y2Y9 288 aaPredicted RBP21.55■■□□□ 1.04
RAB40C-212ENST00000569575 CHCHD2Q9Y6H1 151 aaPredicted RBP21.55■■□□□ 1.04
RAB40C-212ENST00000569575 PRORSD1PA6NEY8 169 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 ALG1L2C9J202 215 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 SCDO00767 359 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 NEURL1O76050 574 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 UTS2O95399 124 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 IGKV1D-16P01601 117 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 P04436 131 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 DBIP07108 87 aaKnown RBP21.54■■□□□ 1.04
RAB40C-212ENST00000569575 THBS1P07996 1170 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 FBXW4P57775 412 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 MAPK11Q15759 364 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 COL28A1Q2UY09 1125 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 PTRH1Q86Y79 214 aaKnown RBP21.54■■□□□ 1.04
RAB40C-212ENST00000569575 PRR22Q8IZ63 422 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 C10orf111Q8N326 155 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 PSD4Q8NDX1 1056 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 TRIM8Q9BZR9 551 aa21.54■■□□□ 1.04
RAB40C-212ENST00000569575 MAP1BP46821 2468 aaKnown RBP21.53■■□□□ 1.04
RAB40C-212ENST00000569575 AGAP5A6NIR3 686 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 GSC2O15499 205 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 FADS1O60427 444 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 FCMRO60667 390 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 SLC25A12O75746 678 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 CHRM4P08173 479 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 CNR1P21554 472 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 DCTP40126 519 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 RFX3P48380 749 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 PCBP3P57721 371 aaKnown RBP21.53■■□□□ 1.04
RAB40C-212ENST00000569575 CHRNEQ04844 493 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 CCNJQ5T5M9 372 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 ZNF468Q5VIY5 522 aaPredicted RBP21.53■■□□□ 1.04
RAB40C-212ENST00000569575 SLC25A25Q6KCM7 469 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 IFNEQ86WN2 208 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 LSM14AQ8ND56 463 aaKnown RBP21.53■■□□□ 1.04
RAB40C-212ENST00000569575 OR10G3Q8NGC4 313 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 NFKBIDQ8NI38 313 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 MAL2Q969L2 176 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 MCUR1Q96AQ8 359 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 FRMD6Q96NE9 622 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 ANGPTL4Q9BY76 406 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.53■■□□□ 1.042e-7■■■■□ 21.9
RAB40C-212ENST00000569575 MKLN1Q9UL63 735 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 DTNAQ9Y4J8 743 aa21.53■■□□□ 1.04
RAB40C-212ENST00000569575 KLRC4-KLRK1H3BQV0 150 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 GSTA4O15217 222 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 SP1P08047 785 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 RPS4Y1P22090 263 aaKnown RBP21.52■■□□□ 1.04
RAB40C-212ENST00000569575 ME2P23368 584 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 EVI2BP34910 448 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 CASP3P42574 277 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 LARS2Q15031 903 aaKnown RBP21.52■■□□□ 1.04
RAB40C-212ENST00000569575 GPR68Q15743 365 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 ZSCAN26Q16670 478 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 KLHL26Q53HC5 615 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 Q6ZS92 163 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 ASB18Q6ZVZ8 466 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 OR52E4Q8NGH9 312 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 SLC35B4Q969S0 331 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 NTNG2Q96CW9 530 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 SCMH1Q96GD3 660 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 RNF145Q96MT1 663 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 TBL1XR1Q9BZK7 514 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 METTL7AQ9H8H3 244 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.52■■□□□ 1.04
RAB40C-212ENST00000569575 MAGEL2Q9UJ55 1249 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 CNOT11Q9UKZ1 510 aaKnown RBP21.52■■□□□ 1.04
RAB40C-212ENST00000569575 GPC6Q9Y625 555 aaPredicted RBP21.52■■□□□ 1.04
RAB40C-212ENST00000569575 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.52■■□□□ 1.04
RAB40C-212ENST00000569575 CACNA1GO43497 2377 aa21.52■■□□□ 1.04
RAB40C-212ENST00000569575 PRAMEF25A6NGN4 478 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 ICOSLGO75144 302 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 UGT2B17O75795 530 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 C17orf67Q0P5P2 114 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 INAQ16352 499 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 GRAMD1BQ3KR37 738 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 SPINK14Q6IE38 97 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 RPUSD3Q6P087 351 aaKnown RBP21.51■■□□□ 1.03
RAB40C-212ENST00000569575 ASRGL1Q7L266 308 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 PACS2Q86VP3 889 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 ZNF227Q86WZ6 799 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 FAM98AQ8NCA5 519 aaKnown RBP21.51■■□□□ 1.03
RAB40C-212ENST00000569575 OR4C3Q8NH37 302 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 THTPAQ9BU02 230 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 RUBCNLQ9H714 662 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 GORASP2Q9H8Y8 452 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 FBXO34Q9NWN3 711 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 PLA2G3Q9NZ20 509 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 SLC35A3Q9Y2D2 325 aa21.51■■□□□ 1.03
RAB40C-212ENST00000569575 NME2P1O60361 137 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 STAMBPO95630 424 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 OXSR1O95747 527 aaPredicted RBP21.5■■□□□ 1.03
RAB40C-212ENST00000569575 IL7RP16871 459 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 NME2P22392 152 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 MSX1P28360 303 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 PGM1P36871 562 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 NCALDP61601 193 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 TRAP1Q12931 704 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms