RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 VPS54Q9P1Q0 977 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 SEC14L4Q9UDX3 406 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 TRMT6Q9UJA5 497 aaKnown RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 APPL1Q9UKG1 709 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 VSIG4Q9Y279 399 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 KLF2Q9Y5W3 355 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 KIF25-AS1Q9Y6Z4 181 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 V9GYY5 206 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 RALGAPA1Q6GYQ0 2036 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 TOGARAM1Q9Y4F4 1720 aa2.84□□□□□ -1.96
HERPUD1-212ENST00000567944 BRD4O60885 1362 aaPredicted RBP2.84□□□□□ -1.96
HERPUD1-212ENST00000567944 EIF3AQ14152 1382 aaKnown RBP2.84□□□□□ -1.96
HERPUD1-212ENST00000567944 MAP2P11137 1827 aaKnown RBP2.84□□□□□ -1.96
HERPUD1-212ENST00000567944 VIRMAQ69YN4 1812 aaKnown RBP2.84□□□□□ -1.96
HERPUD1-212ENST00000567944 CRB1P82279 1406 aa2.84□□□□□ -1.96
HERPUD1-212ENST00000567944 DICER1Q9UPY3 1922 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 PKD1L3Q7Z443 1732 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 SYNJ2BP-COX16A0A087WUM0 186 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 CCT8L1PA6NM43 557 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 CHEK1O14757 476 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 CYTH3O43739 400 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 RHBDL1O75783 438 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 GOT2P00505 430 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 IGHDP01880 384 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 WNT2P09544 360 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 HSD17B1P14061 328 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 AREGP15514 252 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 SAA4P35542 130 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 ATP6V1E1P36543 226 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 RPL34P49207 117 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 ARHGDIAP52565 204 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 VCPP55072 806 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 NLRP11P59045 1033 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 PPIAP62937 165 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 TRA2BP62995 288 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 GSTO1P78417 241 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 INAQ16352 499 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 CLPPQ16740 277 aaPredicted RBP2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 PPP1R3AQ16821 1122 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 DNAJC21Q5F1R6 531 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 ANGPTL8Q6UXH0 198 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 DLEU7Q6UYE1 221 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 SUN5Q8TC36 379 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 ZNF560Q96MR9 790 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 C19orf43Q9BQ61 176 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 FAM173AQ9BQD7 235 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 SPZ1Q9BXG8 430 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 NACA2Q9H009 215 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 TRPV6Q9H1D0 765 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 CENPHQ9H3R5 247 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 ZMYM6O95789 1325 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 EVC2Q86UK5 1308 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 KDRP35968 1356 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 C10orf71Q711Q0 1435 aa2.83□□□□□ -1.96
HERPUD1-212ENST00000567944 C5P01031 1676 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 TNRC6CQ9HCJ0 1690 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 FAM208AQ9UK61 1670 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 CEP290O15078 2479 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 LTN1O94822 1766 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 ITGB4P16144 1822 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 IGHV3-35A0A0C4DH35 117 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 IQANK1A0A1B0GTG1 560 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 MACROD2A1Z1Q3 448 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 KIF2AO00139 706 aaPredicted RBP2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 EEF2KO00418 725 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 CYB561D2O14569 222 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 NME2P1O60361 137 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 BBOX1O75936 387 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 ABHD2P08910 425 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 CD9P21926 228 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 CALML3P27482 149 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 PTPN4P29074 926 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 S100A5P33763 92 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 RIPK4P57078 832 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 YBEYP58557 167 aaPredicted RBP2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 ARPC4P59998 168 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 CXCL6P80162 114 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 NDPQ00604 133 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 TSTA3Q13630 321 aaPredicted RBP2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 RCN1Q15293 331 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 HIST2H2AA3Q6FI13 130 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 ATRAIDQ6UW56 229 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 GCNT7Q6ZNI0 430 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 STOX1Q6ZVD7 989 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 C1orf186Q6ZWK4 172 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 ASRGL1Q7L266 308 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 BNIPLQ7Z465 357 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 LUZP1Q86V48 1076 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 SNX32Q86XE0 403 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 ARL14Q8N4G2 192 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 CCDC110Q8TBZ0 833 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 ANKRD49Q8WVL7 239 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 PPP1R14BQ96C90 147 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 RBM18Q96H35 190 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 PPP1R16AQ96I34 528 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 THUMPD2Q9BTF0 503 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 NLNQ9BYT8 704 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 CIDEBQ9UHD4 219 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 GPRASP1Q5JY77 1395 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 TNS2Q63HR2 1409 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms