RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 SPINT2O43291 252 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 SYT7O43581 403 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 STX11O75558 287 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 GRAP2O75791 330 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 CDC123O75794 336 aaPredicted RBP5.03□□□□□ -1.6
DDB1-219ENST00000541513 ANP32DO95626 131 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 ERCC1P07992 297 aaPredicted RBP5.03□□□□□ -1.6
DDB1-219ENST00000541513 ANXA4P09525 319 aaPredicted RBP5.03□□□□□ -1.6
DDB1-219ENST00000541513 SMIM18P0DKX4 95 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 CMA1P23946 247 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 MPLP40238 635 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 RARRES1P49788 294 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 TPMTP51580 245 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 PPIAP62937 165 aaKnown RBP5.03□□□□□ -1.6
DDB1-219ENST00000541513 PLOD1Q02809 727 aaPredicted RBP5.03□□□□□ -1.6
DDB1-219ENST00000541513 LRRC63Q05C16 580 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 GRM7Q14831 915 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 PTPRRQ15256 657 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 MICBQ29980 383 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 MOGAT2Q3SYC2 334 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 SPDYE7PQ495Y7 208 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 TTMPQ5BVD1 217 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 ARMCX4Q5H9R4 360 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 MIIPQ5JXC2 388 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 SAPCD1Q5SSQ6 148 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 MARCH8Q5T0T0 291 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 ZNF658Q5TYW1 1059 aaPredicted RBP5.03□□□□□ -1.6
DDB1-219ENST00000541513 RESP18Q5W5W9 173 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 LINGO4Q6UY18 593 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 CYP4V2Q6ZWL3 525 aaPredicted RBP5.03□□□□□ -1.6
DDB1-219ENST00000541513 GOLGA7Q7Z5G4 137 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 SLC51BQ86UW2 128 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 PARGQ86W56 976 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 LNX2Q8N448 690 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 OR14A16Q8NHC5 309 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 TEX47Q8TBZ9 253 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 SCARB1Q8WTV0 552 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 DYDC1Q8WWB3 177 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 FAM3CQ92520 227 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 ERGIC1Q969X5 290 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 LGALS12Q96DT0 336 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 MED30Q96HR3 178 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 CIB1Q99828 191 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 CENPKQ9BS16 269 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 TEX101Q9BY14 249 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 GSDMCQ9BYG8 508 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 DHX33Q9H6R0 707 aaKnown RBP5.03□□□□□ -1.6
DDB1-219ENST00000541513 DDX19AQ9NUU7 478 aaKnown RBP5.03□□□□□ -1.6
DDB1-219ENST00000541513 PLEKHB1Q9UF11 243 aaPredicted RBP5.03□□□□□ -1.6
DDB1-219ENST00000541513 ASIC3Q9UHC3 531 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 TBX21Q9UL17 535 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 MYO6Q9UM54 1294 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 WDR45Q9Y484 360 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 TRIP11Q15643 1979 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 LAMA2P24043 3122 aaKnown RBP5.03□□□□□ -1.6
DDB1-219ENST00000541513 CITO14578 2027 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 GOLGA8QA0A0J9YX86 632 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 A0A1W2PPE3 182 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 MEX3AA1L020 520 aaKnown RBP5.02□□□□□ -1.61
DDB1-219ENST00000541513 DBX1A6NMT0 343 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 A8MU76 341 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 C17orf105B2RV13 164 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 I6L893 689 aaPredicted RBP5.02□□□□□ -1.61
DDB1-219ENST00000541513 BCKDKO14874 412 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 WNT9BO14905 357 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 HYAL3O43820 417 aaPredicted RBP5.02□□□□□ -1.61
DDB1-219ENST00000541513 CDC14BO60729 498 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 EZRP15311 586 aaKnown RBP5.02□□□□□ -1.61
DDB1-219ENST00000541513 NAGAP17050 411 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 ENGP17813 658 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 GSTM3P21266 225 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 SRD5A2P31213 254 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 EIF2S3P41091 472 aaKnown RBP5.02□□□□□ -1.61
DDB1-219ENST00000541513 CRYBB2P43320 205 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 OR3A3P47888 321 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 CASP4P49662 377 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 HNRNPH2P55795 449 aaKnown RBP5.02□□□□□ -1.61
DDB1-219ENST00000541513 IRF8Q02556 426 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 CDH18Q13634 790 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 EXOSC2Q13868 293 aaKnown RBP5.02□□□□□ -1.61
DDB1-219ENST00000541513 KPNB1Q14974 876 aaKnown RBP5.02□□□□□ -1.61
DDB1-219ENST00000541513 EXOSC7Q15024 291 aaKnown RBP5.02□□□□□ -1.61
DDB1-219ENST00000541513 EXT1Q16394 746 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 CA9Q16790 459 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 EIF2S3LQ2VIR3 472 aaKnown RBP5.02□□□□□ -1.61
DDB1-219ENST00000541513 THEM4Q5T1C6 240 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 LIPJQ5W064 366 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 RHBDD2Q6NTF9 364 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 TCTN3Q6NUS6 607 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 FUT10Q6P4F1 479 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 SHC4Q6S5L8 630 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 RBM44Q6ZP01 1051 aaKnown RBP5.02□□□□□ -1.61
DDB1-219ENST00000541513 SPRED1Q7Z699 444 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 TMEM123Q8N131 208 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 NAGSQ8N159 534 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 GABRG1Q8N1C3 465 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 MUC20Q8N307 709 aaPredicted RBP5.02□□□□□ -1.61
DDB1-219ENST00000541513 SLC5A8Q8N695 610 aa5.02□□□□□ -1.61
DDB1-219ENST00000541513 FAM86B1Q8N7N1 296 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms