RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 KIRREL1Q96J84 757 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 SLC38A2Q96QD8 506 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 NELL2Q99435 816 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 CD180Q99467 661 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 CCDC3Q9BQI4 270 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 DCUN1D5Q9BTE7 237 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 RAB33BQ9H082 229 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 SLC6A17Q9H1V8 727 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 MMP27Q9H306 513 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 IL21RQ9HBE5 538 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 LTB4R2Q9NPC1 389 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 ISYNA1Q9NPH2 558 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 MRPS18AQ9NVS2 196 aaKnown RBP5.19□□□□□ -1.58
PCF11-205ENST00000530906 RLIMQ9NVW2 624 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 WSB2Q9NYS7 404 aaPredicted RBP5.19□□□□□ -1.58
PCF11-205ENST00000530906 ZNF226Q9NYT6 803 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 NLGN3Q9NZ94 848 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 CCDC59Q9P031 241 aaKnown RBP5.19□□□□□ -1.58
PCF11-205ENST00000530906 C5AR2Q9P296 337 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 PNMA8BQ9ULN7 279 aaPredicted RBP5.19□□□□□ -1.58
PCF11-205ENST00000530906 CFL2Q9Y281 166 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 TMEM5Q9Y2B1 443 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 KLHL20Q9Y2M5 609 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 WDR45Q9Y484 360 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 FANCMQ8IYD8 2048 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 CHD9Q3L8U1 2897 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 SNRNP200O75643 2136 aaKnown RBP5.18□□□□□ -1.58
PCF11-205ENST00000530906 A0A0G2JN53 185 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 A0A1W2PPC1 479 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 PRAMEF27A3QJZ7 478 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 AGAP5A6NIR3 686 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 SAGE2PA6NJ88 616 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 GLOD5A6NK44 160 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 EFCAB9A8MZ26 197 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 H0Y8X5 98 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 H0YGG7 62 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 H3BN98 237 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 J3KTA2 159 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 TAF4O00268 1085 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 CYR61O00622 381 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 PPM1DO15297 605 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 MBTPS2O43462 519 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 AIREO43918 545 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 CTSVO60911 334 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 CYP7B1O75881 506 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 EML2O95834 649 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 HMGN1P05114 100 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 SLC35E2P0CK97 266 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 THEGLP0DJG4 465 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 ADORA3P0DMS8 318 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 RNH1P13489 461 aaKnown RBP5.18□□□□□ -1.58
PCF11-205ENST00000530906 ZNF182P17025 639 aaPredicted RBP5.18□□□□□ -1.58
PCF11-205ENST00000530906 ENDOUP21128 410 aaKnown RBP5.18□□□□□ -1.58
PCF11-205ENST00000530906 CD72P21854 359 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 CD27P26842 260 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 CSTF2P33240 577 aaKnown RBP eCLIP5.18□□□□□ -1.58
PCF11-205ENST00000530906 CNR2P34972 360 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 TGFBR2P37173 567 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 FEN1P39748 380 aaKnown RBP5.18□□□□□ -1.58
PCF11-205ENST00000530906 GSSP48637 474 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 PCYT1AP49585 367 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 ENTPD1P49961 510 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 PRKAG1P54619 331 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 CASP9P55211 416 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 RGS8P57771 180 aaPredicted RBP5.18□□□□□ -1.58
PCF11-205ENST00000530906 TAS2R41P59536 307 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 ARF3P61204 181 aaPredicted RBP5.18□□□□□ -1.58
PCF11-205ENST00000530906 CDK5Q00535 292 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 HHEXQ03014 270 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 RAB40BQ12829 278 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 MAP4K2Q12851 820 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 EIF2B5Q13144 721 aaKnown RBP5.18□□□□□ -1.58
PCF11-205ENST00000530906 TARDBPQ13148 414 aaKnown RBP eCLIP5.18□□□□□ -1.58
PCF11-205ENST00000530906 TMED1Q13445 227 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 FAM53BQ14153 422 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 FZD2Q14332 565 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 NR1D2Q14995 579 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 ZNHIT3Q15649 155 aaPredicted RBP5.18□□□□□ -1.58
PCF11-205ENST00000530906 SMN1Q16637 294 aaKnown RBP5.18□□□□□ -1.58
PCF11-205ENST00000530906 DEFB134Q4QY38 66 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 ZNF628Q5EBL2 1059 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 C3orf38Q5JPI3 329 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 TCTE1Q5JU00 501 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 TPRG1LQ5T0D9 272 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.18□□□□□ -1.58
PCF11-205ENST00000530906 FHL5Q5TD97 284 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 SLC27A4Q6P1M0 643 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 PODNL1Q6PEZ8 512 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 LRFN4Q6PJG9 635 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 CCDC81Q6ZN84 652 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 FRRS1Q6ZNA5 592 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 ADCK1Q86TW2 530 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 GKN2Q86XP6 184 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 GRAMD2AQ8IUY3 354 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 CCDC103Q8IW40 242 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 CMIPQ8IY22 773 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 ZNF595Q8IYB9 648 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 ZNF619Q8N2I2 560 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 MFSD4AQ8N468 514 aa5.18□□□□□ -1.58
PCF11-205ENST00000530906 CSNK1A1LQ8N752 337 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms